Actinobacillus pleuropneumoniae JL03 (serotype 3): APJL_0329
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Entry
APJL_0329 CDS
T00644
Symbol
hepA
Name
(GenBank) RNA polymerase associated protein
KO
K03580
ATP-dependent helicase HepA [EC:5.6.2.-]
Organism
apj
Actinobacillus pleuropneumoniae JL03 (serotype 3)
Brite
KEGG Orthology (KO) [BR:
apj00001
]
09180 Brite Hierarchies
09182 Protein families: genetic information processing
03021 Transcription machinery [BR:
apj03021
]
APJL_0329 (hepA)
Transcription machinery [BR:
apj03021
]
Prokaryotic type
Bacterial type
Other transcription-related factors
RNA polymerase-associated proteins
APJL_0329 (hepA)
BRITE hierarchy
SSDB
Ortholog
Paralog
Gene cluster
GFIT
Motif
Pfam:
RapA_C
Tudor_RapA
Tudor_1_RapA
Helicase_C
SNF2-rel_dom
ResIII
DEAD
Cas3-like_C_2
Flavi_DEAD
Motif
Other DBs
NCBI-ProteinID:
ABY68920
UniProt:
B0BT63
LinkDB
All DBs
Position
354175..357084
Genome browser
AA seq
969 aa
AA seq
DB search
MFVVGQRWISESENNLGLGIVTASDNRTVTIQFPAAEEERIYALSVAPLTRVQFQKGDRI
NSVEGWQLDVEEVVENQGFIIYLGKRADSGEEAVLPEMQLDHKVSFSKPQDRLFSAQIDR
SDRFALRYRALQHQQAQFQSPLRGMRGIRASLIPHQLHIAKEVGQRVAPRVLLADEVGLG
KTIEAGMILQQQLFSGRVERVLVLVPESLQHQWLVEMLRRFNLKFSLFDEERCADFDKAD
EDGNDVSENPFDSEALVIASIDWLESSPNRAKQVLASNWDMLIVDEAHHLEWSENEPSVG
YQFVERLSKQTSAVLLLTATPEQLGQESHFARLALLDADRFYDYNSFVAEQKDYKPVADA
VATLLNDKPLSNDEQNSIADLLSEKDTEPMFKVINSEKSKENDRLQVRQELIRELIDRHG
TSRVLFRNTRQGVKGFPHRVYHQITLEMPSQYTNALKVMGMMGGVTKDDQLYPERLFQRM
NPAAKWADFDPRIEWLITFLKNHRDEKILVICKQADTAIALEQILREREAIRSAVFHEKM
SIVERDRASAYFAQMEEGAQVLISSSIGSEGRNFQFASNLVLFNLPDNPDLLEQSIGRLD
RIGQKNDIQIHVPCFENSMQMILATWYHQGLNAFEETCPMGAALFREFGEELEIFLKNPQ
AVGFDEFLAKTFKRQQHLKAELEQGRDRLLELNSNGGEAAQALAEAIAKEDNNPHLVNFA
LSLFDVIGLEQEDLGEQSIVISPTGHMLVPDFPGIAEDGTTVTFDRQLALMREDVEFLTW
DHPMIRNGIDLITSGYIGKSAISLLINKNLPAGTLLLEAIYMVETQAPKGLNLTRFLPPT
PVRILLDNKGNDMAAQVSFAGLEKQLKPLNKQMANKIAKMAQADIKKLIGISEQKIAAKL
PELIEKASQDADSTLSAELHRLTSLQAVNKNIRSDEIEALEQQRIESLKQIALANWRLDS
LRVIVSNKE
NT seq
2910 nt
NT seq
+upstream
nt +downstream
nt
atgttcgtagtaggtcagcgctggattagcgaatcagaaaataatttaggcttaggtatt
gtaacggcaagtgataatcgtaccgttaccattcaatttcctgccgcagaagaagagcgt
atttatgcgctttcggtcgcccctttaacaagagtacaatttcaaaaaggcgatcgtatt
aatagcgtggaaggttggcagttagatgttgaagaggtagtcgaaaaccaaggttttatt
atctatttaggtaagcgagcggattccggtgaagaagccgtattgcccgaaatgcagtta
gaccataaagtgagtttcagcaagccgcaagaccgtttattttcagcacaaatcgaccgt
tccgatcgctttgctttacgttatcgagcattacaacatcaacaagcccaatttcaatcg
ccgctacgaggaatgcgaggcattcgtgcgagcttaattccgcaccaattacatattgct
aaagaagtcggtcagcgtgttgcgcctcgagtattattagcggatgaagtcggtttaggt
aaaaccattgaagcggggatgattttgcaacaacagcttttctccggcagagtcgagcgt
gtattggtgctggtgccggaaagtttgcaacatcaatggctagttgaaatgttacgtcgt
ttcaacttgaaattttcattatttgatgaagaacgttgtgccgatttcgataaagcggat
gaagacggtaatgatgtcagcgaaaatccatttgatagcgaagcgttagtgattgcctca
atcgactggttggaaagctcgccgaatcgtgctaaacaagtattggcaagtaattgggat
atgctcatcgttgatgaagctcatcatttggaatggtcggaaaacgagccgagtgtcggc
taccaatttgttgagcgtttatcaaaacaaacctcggcggtattacttctcaccgcaacg
cctgagcaactcggacaagaaagtcattttgcccgtttagcattattggatgcggatcga
ttctatgattacaacagctttgttgccgaacaaaaagattacaaaccggtggcggatgcg
gtggcgactttactaaatgacaagccgttaagtaatgatgagcaaaatagcattgcggat
ctgttgagtgagaaagacaccgagccgatgtttaaggtcatcaatagcgaaaaatcgaaa
gaaaatgaccgcttgcaagtacgtcaagaattgattcgtgagctgattgaccgccacggt
accagccgtgtgttattccgcaatacgcgtcaaggtgtgaaaggcttcccgcaccgtgtt
tatcatcaaattactttggaaatgccaagccaatataccaatgcgttaaaagtgatgggt
atgatgggcggtgtaaccaaagatgatcagctttatccggaacgtttattccaacgtatg
aatccggcggcaaaatgggcggattttgaccctcgtatcgaatggttgattacgttcttg
aaaaatcaccgtgacgagaaaatcttagtcatttgtaagcaagcggatacggcgattgcg
cttgaacaaatcttacgtgaacgtgaagcgattcgttcggcggtgttccatgaaaaaatg
tcgattgtagaacgagatagagcttccgcttactttgcccaaatggaagagggcgctcag
gtcttgattagttcgagtatcggctcggaagggcgtaacttccaatttgccagcaattta
gtgttgttcaatttaccggataatccggacttgttggaacaaagtatcggacgtttagac
cgtatcggtcagaaaaatgatattcagattcatgtaccgtgttttgaaaattcaatgcag
atgatattagcgacttggtatcatcagggcttaaatgcgtttgaagaaacctgtccgatg
ggcgctgcgttattccgtgaattcggcgaagagttggaaatcttcctgaagaatccgcaa
gcggtcggatttgacgaatttcttgcaaaaacctttaaacgccaacaacacttgaaagcg
gaattagagcaaggtcgagatcgtttacttgagctcaattcaaatggcggcgaggcggca
caagcgttggctgaagcgatcgcaaaagaagataataatccgcacttagtcaattttgct
ttgagtttatttgatgttatcggcttagagcaggaagatttaggcgagcaatctatcgtg
attagcccgaccggccatatgcttgtacctgacttcccgggtattgcggaagacggtacg
acagtcacctttgaccgtcagcttgcactcatgcgagaagacgttgagtttttaacttgg
gatcacccaatgattcgtaacggtattgacttgattacttccggatatatcggtaaatcg
gcaatttcgttactgattaataaaaacttaccggcaggcactttattgcttgaagcgatt
tatatggtggaaactcaagcgccgaaaggtttaaatttaacgcgtttcctaccgccgaca
ccggtgcgtatcttattagataataaaggtaacgatatggcggcccaggtgtcgtttgca
gggcttgagaagcagttaaaaccgctgaataaacaaatggcaaataaaattgcgaaaatg
gcgcaagcggatattaaaaaattaatcggtatcagcgagcaaaaaatcgcagctaaatta
ccggaattaatcgaaaaggccagccaagatgcggatagtacattaagtgcggaattgcat
cgtttaacctcgttacaagcggtgaataaaaatattcgttctgatgaaattgaagcattg
gaacaacaacgcattgaatcgcttaagcaaattgcattagcgaattggcgtttagacagc
ttacgtgtgattgtaagtaataaagaatag
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