Actinobacillus pleuropneumoniae JL03 (serotype 3): APJL_0500
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Entry
APJL_0500 CDS
T00644
Symbol
polA
Name
(GenBank) DNA polymerase I
KO
K02335
DNA polymerase I [EC:
2.7.7.7
]
Organism
apj
Actinobacillus pleuropneumoniae JL03 (serotype 3)
Pathway
apj03030
DNA replication
apj03410
Base excision repair
apj03420
Nucleotide excision repair
apj03440
Homologous recombination
Brite
KEGG Orthology (KO) [BR:
apj00001
]
09120 Genetic Information Processing
09124 Replication and repair
03030 DNA replication
APJL_0500 (polA)
03410 Base excision repair
APJL_0500 (polA)
03420 Nucleotide excision repair
APJL_0500 (polA)
03440 Homologous recombination
APJL_0500 (polA)
09180 Brite Hierarchies
09182 Protein families: genetic information processing
03032 DNA replication proteins [BR:
apj03032
]
APJL_0500 (polA)
03400 DNA repair and recombination proteins [BR:
apj03400
]
APJL_0500 (polA)
Enzymes [BR:
apj01000
]
2. Transferases
2.7 Transferring phosphorus-containing groups
2.7.7 Nucleotidyltransferases
2.7.7.7 DNA-directed DNA polymerase
APJL_0500 (polA)
DNA replication proteins [BR:
apj03032
]
Prokaryotic type
DNA Replication Elongation Factors
Elongation factors (bacterial)
Other elongation factors
APJL_0500 (polA)
DNA repair and recombination proteins [BR:
apj03400
]
Prokaryotic type
SSBR (single strand breaks repair)
BER (base exicision repair)
DNA polymerase I
APJL_0500 (polA)
NER (nucleotide excision repair)
GGR (global genome repair) factors
APJL_0500 (polA)
BRITE hierarchy
SSDB
Ortholog
Paralog
Gene cluster
GFIT
Motif
Pfam:
DNA_pol_A
5_3_exonuc_N
DNA_pol_A_exo1
5_3_exonuc
DNA_polI_exo1
HHH_5
RapH_N
Motif
Other DBs
NCBI-ProteinID:
ABY69081
UniProt:
B0BU76
LinkDB
All DBs
Position
550347..553106
Genome browser
AA seq
919 aa
AA seq
DB search
MYGVLNMLKSLVAQVEPSHIAVVFDAKGKTFRDELFEQYKSHRPPMPDDLRAQVQPLHTI
IKALGIPLISIEGVEADDVIGTLAVQAANAGKNVLISTGDKDMAQLVNDHIMLINTMNNT
LLDREGVIDKYGIPPELIIDYLALQGDASDNIPGVKGVGEKTALGLLQGIGSLKEIYANL
DQVATLSFRGAKTLAPKLEAEKDAAALSYLLATIKTDVELEVTHEQLVVQPQKRDELVEL
FGRYEFKRWLNEVMNDANPVTQNSEEKIPNNYQATASVPQAVETEQTFAKVEINRSRYET
VTTMEQLQSWIEKINQVKLVAVDTETDNLDSMSANLVGVSFGLANGDACYIPLTHKEQVT
LEPQQSDLFAEQAEAETTTSFELAKKQLNLTACLTELKPLLENADVKKIGQNIKYDLTIF
ANHGVQVEGVAFDTMLESYTLNSTGRHNMDELADRYLGHKTIEFEEIAGKGKNQLTLDKI
AIDVASQYAAEDADVTMKLHQVLAPELEKAPTLVKLFNEIEMPLVEVLSRIERNGVLIDP
EKLLAQSAEIEQRLAELEQLVHSEAGEVFNLASTKQLQEILFTKLGLPVLKKTPKGAPST
NEEVLDELAGQGHLVPKLLMEHRGLSKLKSTYTDKLPLMINQKTGRVHTSYHQAVTATGR
LSSSDPNLQNIPIRNEEGRRIRQAFIARDGYKIVAADYSQIELRIMAHLANDEGMITAFA
EGKDIHRATAAEIFGLALDQVTSEQRRSAKAINFGLIYGMSEFGLSNQLGISRADAKKYM
ERYFQRYPAVQQFMTDIRESASEKGYVETLFGRRLYLPEIKSSNAMRRKAAERVAINAPM
QGTAADIIKVAMIGIDKAIRGDDNIKMIMQVHDELVFEVKEELVEHYSQLIKAEMEKAIQ
LKVPLIAEVGVGDNWDEAH
NT seq
2760 nt
NT seq
+upstream
nt +downstream
nt
atgtacggtgtgttaaatatgctgaaaagtttggttgcccaggttgagccgagtcatatt
gcagtggtttttgatgcgaaggggaaaaccttccgtgacgagttgttcgaacaatataaa
tcgcaccgtccgccgatgccggatgatttgcgtgcgcaagtgcaaccgttacatacgatt
attaaagcgttaggtatcccgttgatttcaattgaaggtgtggaagcggatgacgtgatc
ggtacgcttgcggtgcaggcggcgaatgccggtaaaaatgtgttaatcagtaccggcgat
aaagacatggcacaattggtgaacgatcatatcatgctgattaatacgatgaacaatact
ttgcttgatcgtgaaggtgtgattgataagtacggtattccaccggagctgattattgat
tatttagcattgcaaggcgacgcttcggataatattcccggagtaaaaggcgtcggtgag
aaaacagcattaggtttgttgcaaggaatcggctcattaaaagagatttatgcgaatttg
gatcaagtggctacgctttcgttccgtggcgctaaaacacttgcaccgaaattagaagcg
gagaaagacgcggcggctctatcttatttgcttgccacgattaagaccgatgttgaattg
gaagtcacccatgaacaattagtggtgcaaccgcaaaagcgtgacgaattagttgagctg
ttcgggcgttatgaattcaaacgttggctgaatgaagtgatgaatgacgctaaccccgtc
acgcagaattcagaggaaaaaatccctaacaattatcaagcgactgcttcagtaccacaa
gcggtcgaaaccgagcaaacttttgcaaaagtggagattaatcgtagccgatatgaaacg
gtaacgacaatggaacagttacagtcttggattgaaaagatcaaccaagtaaaattagtg
gcggtggatactgaaaccgataatttagattctatgtcggcaaatttagttggggtttca
ttcggtttggctaacggggatgcctgctatattccgctaacgcacaaagaacaggtaacg
cttgagcctcagcaaagtgatctgttcgccgagcaggcagaagcagaaaccaccacaagt
tttgaacttgcaaaaaagcagctaaatttgaccgcttgtttaaccgaacttaagccgcta
ttagaaaatgcggacgtgaaaaagatcgggcaaaacattaaatatgatctgaccattttt
gcgaatcatggtgtgcaagtagagggtgttgcattcgatacgatgctggaatcttatacg
ctaaatagtaccggtcgccataatatggacgaattagcggatcgttatttagggcataaa
acgattgagtttgaagaaattgccggtaaaggtaaaaatcagctgacactcgataaaatt
gcgattgatgtcgcttcacaatatgcggcggaagatgcggatgtgacgatgaaattacat
caagtgcttgcgccggaattagagaaagcgccgacattggttaaattgtttaatgaaatt
gaaatgccgttggttgaagtgctttctcgcattgagcgtaacggtgtattgattgatccg
gaaaaattactggcgcaatcggcagaaattgagcagcgtttagctgagttggaacagtta
gtgcatagtgaagccggtgaagtctttaatcttgcttctaccaaacaattacaagaaatt
ttatttactaaacttggcttacctgtcttgaaaaaaacaccgaaaggtgcgccttctacc
aatgaagaagtgttggatgaattagcggggcaagggcatttagtgccgaaattactaatg
gaacatcgtggtttaagtaagttgaaatcgacttataccgataagttaccgttaatgatt
aatcaaaaaacgggtcgagtgcatacttcttatcatcaggcggtaacggcaaccggtcgt
ctttcgtcaagcgatccgaatttacaaaatattccgatccgtaatgaggaaggcagacgt
attcgtcaggcatttattgctcgcgacggttataaaattgttgccgccgactattcgcaa
atcgagttgcgtattatggcgcatttagcaaatgatgagggtatgattaccgctttcgcc
gaaggcaaagatattcaccgtgcaacggcagcggaaattttcggtttagcgttggatcaa
gtaacaagtgagcaacgccgtagtgctaaggcgattaactttggtctaatttatggcatg
tcggaattcggtttatcgaaccaattaggtatttcacgtgccgatgcgaaaaaatatatg
gaacgctatttccaacgttatccggcggtgcaacaatttatgaccgatattcgtgaaagt
gcgagtgaaaaaggttatgtggaaacacttttcggcagacgtttatatttaccggaaatt
aagtccagtaatgcaatgcgccgtaaagcggcggaacgtgtggcgatcaatgcaccaatg
caaggcactgcggcggatattattaaagtcgcaatgattggcattgataaagcgattcga
ggcgatgacaacattaaaatgattatgcaagtgcatgatgaattggtgtttgaagtgaaa
gaagagttggtggaacattacagccaattaattaaagcggaaatggaaaaagcgattcag
cttaaagtgccgttaattgcagaagtcggcgtgggcgataattgggacgaagcgcattaa
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