Actinobacillus pleuropneumoniae JL03 (serotype 3): APJL_0611
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Entry
APJL_0611 CDS
T00644
Symbol
rnd
Name
(GenBank) ribonuclease D
KO
K03684
ribonuclease D [EC:
3.1.13.5
]
Organism
apj
Actinobacillus pleuropneumoniae JL03 (serotype 3)
Brite
KEGG Orthology (KO) [BR:
apj00001
]
09180 Brite Hierarchies
09182 Protein families: genetic information processing
03016 Transfer RNA biogenesis [BR:
apj03016
]
APJL_0611 (rnd)
Enzymes [BR:
apj01000
]
3. Hydrolases
3.1 Acting on ester bonds
3.1.13 Exoribonucleases producing 5'-phosphomonoesters
3.1.13.5 ribonuclease D
APJL_0611 (rnd)
Transfer RNA biogenesis [BR:
apj03016
]
Prokaryotic type
3'processing and CCA adding factors
3'processing factors
APJL_0611 (rnd)
BRITE hierarchy
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Ortholog
Paralog
Gene cluster
GFIT
Motif
Pfam:
DNA_pol_A_exo1
RNAseD_HRDC_C
HRDC
RsdA_SigD_bd
PINIT
Motif
Other DBs
NCBI-ProteinID:
ABY69181
UniProt:
B0BNP6
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All DBs
Position
662369..663484
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AA seq
371 aa
AA seq
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MNQIIHYHWIDTDEKLKTVCENACRKSAVALDTEFIRTRSYYPKLGLIQLFDGDTVSLID
PNPISDFSPFIGLLTCQNVVKVLHACSEDLEVFQHLFKQLPTPLADTQIMAGFAGGGISL
GFAKLVAHYLNVELDKGASRTDWLARPLTEEQLQYAAADVWYLLPVYQRLVSDLDATRWQ
NAVEQECRYLLSKRESVANIAQAYKDISNAWRLEPQQLAILKVLAKWRIEEAEKRDLALN
FVVKENCLFEIAKLQPKHTSQLLEFMHPNEVRIHGKKLLMLVEQGLAVLPENYPEKIIRL
VDQANYKYKLKAMQQKLAEIQPPDLAPELLASKRQLNQLFSWHQQGQNEDKLPELLSGWR
REFGLQILSVL
NT seq
1116 nt
NT seq
+upstream
nt +downstream
nt
atgaatcaaatcattcactatcattggattgatacggacgaaaaattaaaaacggtttgc
gagaacgcttgtcggaaatcggcagtggcattggataccgaatttattcgaacccgttcg
tattacccgaaacttggtcttattcagctttttgacggcgatactgtcagtttgattgat
cctaatccaatctccgatttctctccgtttatcggtttattgacgtgtcaaaacgtcgta
aaagtattacacgcttgcagtgaagatttagaggttttccagcaccttttcaaacagttg
cctacacctttggctgatacgcaaatcatggcaggatttgcagggggcggcatttcgcta
ggttttgctaaacttgtcgcgcattatttaaatgtcgagctggataaaggcgcctccaga
acggactggctcgcacgaccattaacggaagaacaattacaatacgcggcggcggatgta
tggtatttgttaccggtttatcaacgcttggtttcggatctggatgcgacacgttggcaa
aatgccgttgaacaggaatgtcgatatttattaagtaaaagagaatccgtcgcaaatatt
gctcaagcgtataaagatatttcaaacgcatggcgtttagaacctcagcaactggctata
ttaaaagtactggcgaaatggcgaatagaagaagcggaaaaacgagatttagcattaaat
ttcgtcgtgaaagaaaattgtttatttgaaatagctaaattgcaaccgaaacatacttcg
caattattggaatttatgcatccgaacgaagtacgtattcatggtaaaaaattgttaatg
ctcgttgaacaggggttagccgtattaccggaaaactatcctgaaaaaattatacgttta
gtagatcaggcaaactataaatataaattgaaggcgatgcagcaaaaattagcggaaatt
caaccgcctgatttagcacccgagttattagccagtaaacggcaattaaatcaacttttc
agttggcatcaacaagggcaaaatgaggataaactaccggaactactgagcggatggcgt
cgagagttcggtttacaaattctttcggttttgtga
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