Actinobacillus pleuropneumoniae JL03 (serotype 3): APJL_0668
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Entry
APJL_0668 CDS
T00644
Symbol
sbcB
Name
(GenBank) exonuclease I
KO
K01141
exodeoxyribonuclease I [EC:
3.1.11.1
]
Organism
apj
Actinobacillus pleuropneumoniae JL03 (serotype 3)
Pathway
apj03430
Mismatch repair
Brite
KEGG Orthology (KO) [BR:
apj00001
]
09120 Genetic Information Processing
09124 Replication and repair
03430 Mismatch repair
APJL_0668 (sbcB)
09180 Brite Hierarchies
09182 Protein families: genetic information processing
03400 DNA repair and recombination proteins [BR:
apj03400
]
APJL_0668 (sbcB)
Enzymes [BR:
apj01000
]
3. Hydrolases
3.1 Acting on ester bonds
3.1.11 Exodeoxyribonucleases producing 5'-phosphomonoesters
3.1.11.1 exodeoxyribonuclease I
APJL_0668 (sbcB)
DNA repair and recombination proteins [BR:
apj03400
]
Prokaryotic type
SSBR (single strand breaks repair)
MMR (mismatch excision repair)
DNA exonucleases
APJL_0668 (sbcB)
DSBR (double strand breaks repair)
HR (homologous recombination)
RecBC pathway proteins
APJL_0668 (sbcB)
NHEJ (non-homologous end-joining)
SHDIR (short-homology-dependent illegitimate recombination)
Supressor
APJL_0668 (sbcB)
SSDB
Ortholog
Paralog
GFIT
Motif
Pfam:
ExoI_SH3
ExoI_C
RNase_T
Sulfatase_C
Motif
Other DBs
NCBI-ProteinID:
ABY69237
UniProt:
B0BNV2
LinkDB
All DBs
Position
complement(730186..731730)
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AA seq
514 aa
AA seq
DB search
MNKNLTFFFYDYESFGVSPALDRPAQFAGIRTDSDFNIIGEPVMFYCKQTPDYLPSPEAV
MVTGITPQQCNAEGVPEPEFAARIHAEFSQPNTCILGYNNIRYDDEMTRYTFFRNFFDPY
EYSWKNGNSRWDLLDLVRACYALRPDGIEWVIDENGMPNFKLENLTKANGIAHENAHDAM
ADVYATIAMAKLIKQKQPKLFQFFFENRGKKEIEKMIDTGEMTPLVHVSGMFGNARANTA
WIAPIAWHPTNQNQVLCCDLSGDVSALLTDSAEELRTRLYTKKEELAEGVAPVPLKGVHI
NRCPIIAPAKVLLPENAARLGIDRERCLENLKLLKANKSLVREKVTEIFMEERSFEPSAN
VETTLYDGFFSPADKNNMAILRTLPPQELAHHGLQFADERVEALLFHYRARHYPETLSRA
EQIKWQKYCHQQIDAKSVQFAEAIDILFQIHHDNPEKVKLLENLTAYAAQIAEFQVVKHT
ANEQNEQLVSALNQVAEQRMNKAAKLEMLKALIK
NT seq
1545 nt
NT seq
+upstream
nt +downstream
nt
atgaataaaaatcttacttttttcttttatgattacgaaagtttcggtgtgagtccggcg
ttagatcgtccggcacagtttgccggtattcgtaccgatagtgattttaatatcatcggt
gagccggtgatgttttattgtaagcaaacaccggattatttaccttcgcctgaagcggtg
atggtgacgggtattactccgcaacagtgtaacgctgaaggcgtgccggaaccggaattt
gctgcacgaatccacgctgaattcagccagccgaacacttgcattttaggctataacaat
atccgttatgacgatgaaatgacccgttatacctttttccgcaatttctttgacccgtat
gaatatagctggaaaaatggtaattctcgttgggatctgttagatcttgttcgagcttgt
tatgcactgcgtccggacggcattgaatgggtaatagatgaaaacggtatgccgaatttc
aaattagagaatctcactaaagcgaacggcattgctcatgaaaatgcgcacgatgcaatg
gcggacgtttacgccacgattgcgatggcgaaattgattaagcaaaaacagccgaaactt
ttccaatttttctttgaaaatcgtggtaagaaagaaattgagaaaatgattgataccggt
gaaatgactccgttggtacacgtttccggtatgtttggcaacgcacgtgctaataccgct
tggattgcaccgatagcatggcacccaactaatcaaaatcaagtgttatgttgcgatcta
tccggcgatgttagtgccttattaacggattcagcggaagaattacgtactcgtctatac
actaaaaaagaagagctggctgaaggtgttgcacctgttccattaaaaggggtgcatatt
aatcgttgtccgattattgccccggcaaaagtgttgttgcctgaaaatgcggctcgctta
ggcattgatcgtgagcgttgtttggaaaatctcaaattactgaaagcgaataaaagttta
gtgcgcgagaaagtgaccgaaatttttatggaagaacggagctttgagccttctgcgaat
gtggaaaccacgctgtatgacggctttttctcaccggcagataaaaataatatggcgatt
ttgcgtacgttaccgccgcaagaattggcgcatcacggcttacagtttgccgatgaacga
gtagaagcgttgttatttcattatcgagccagacattatcccgaaacattgagccgagcg
gaacagattaaatggcagaaatattgtcatcagcagatagatgccaaatcggtacaattt
gccgaagcgattgatatcttattccaaattcatcacgataatccggaaaaggtaaaatta
ttggaaaatttgaccgcttacgctgcacaaattgcggaatttcaggtagttaaacacacc
gctaatgaacaaaatgaacagttggtttcagccttaaaccaagtggcggaacagaggatg
aataaagctgcgaagttggaaatgctaaaggcattaattaaataa
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