Actinobacillus pleuropneumoniae JL03 (serotype 3): APJL_0886
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Entry
APJL_0886 CDS
T00644
Symbol
holA
Name
(GenBank) DNA polymerase III delta subunit
KO
K02340
DNA polymerase III subunit delta [EC:
2.7.7.7
]
Organism
apj
Actinobacillus pleuropneumoniae JL03 (serotype 3)
Pathway
apj03030
DNA replication
apj03430
Mismatch repair
apj03440
Homologous recombination
Brite
KEGG Orthology (KO) [BR:
apj00001
]
09120 Genetic Information Processing
09124 Replication and repair
03030 DNA replication
APJL_0886 (holA)
03430 Mismatch repair
APJL_0886 (holA)
03440 Homologous recombination
APJL_0886 (holA)
09180 Brite Hierarchies
09182 Protein families: genetic information processing
03032 DNA replication proteins [BR:
apj03032
]
APJL_0886 (holA)
03400 DNA repair and recombination proteins [BR:
apj03400
]
APJL_0886 (holA)
Enzymes [BR:
apj01000
]
2. Transferases
2.7 Transferring phosphorus-containing groups
2.7.7 Nucleotidyltransferases
2.7.7.7 DNA-directed DNA polymerase
APJL_0886 (holA)
DNA replication proteins [BR:
apj03032
]
Prokaryotic type
DNA Replication Elongation Factors
Elongation factors (bacterial)
DNA polymerase III holoenzyme
APJL_0886 (holA)
DNA repair and recombination proteins [BR:
apj03400
]
Prokaryotic type
SSBR (single strand breaks repair)
MMR (mismatch excision repair)
DNA polymerase III holoenzyme
APJL_0886 (holA)
SSDB
Ortholog
Paralog
GFIT
Motif
Pfam:
DNA_pol3_delt_C
DNA_pol3_delta
DNA_pol3_delta_C
DUF6678
Blo-t-5
Motif
Other DBs
NCBI-ProteinID:
ABY69444
UniProt:
B0BPF9
LinkDB
All DBs
Position
980772..981797
Genome browser
AA seq
341 aa
AA seq
DB search
MQKVFPEALPNLLSKSLSPFYLLTGNDLLLINESKAHIVQAARLADFDEKQEVSIANDTK
WEALFEAAQSNGLFFNRQIIILNLPEAPTAAQMKNVAELCRFSHPDLLLILCLPKFSKAM
EKQAWFTQIEAQTVQINCQTPEMAKLPTWISHRAKAMELQIEPEAIQLLCYSYEGNLLAL
KQALQMLQLRFNDGKISLARAKEVVEQSAQFSPFQWIDALLEGKIARAERILKHLQNEEV
QPVVLLRIIQKELLVLLEITRSPQPVQNSNQPLYMGNLRAEFDRLKVWQNRRPFYQAAVQ
RLTYKKLYQLIQRLAELEKQVKQEFRDEIWLELERFSTYFE
NT seq
1026 nt
NT seq
+upstream
nt +downstream
nt
atgcaaaaagttttccctgaagcacttcctaaccttttatctaaaagcctctcccctttc
tatctactgacaggcaacgatcttctactgattaacgaaagtaaagctcacatcgtgcaa
gccgctcgtttagcggatttcgatgagaaacaagaagtcagtattgcaaatgacacaaaa
tgggaagctctgtttgaggcagcacaatcaaacggtttgttctttaatcgccaaattatt
attctcaacctgccagaagcgccaactgcagcacaaatgaaaaatgttgcggagttatgc
cgttttagccatccggatctattgttgattctctgcttaccaaaattcagtaaggcaatg
gaaaagcaagcatggttcacacaaatcgaagcacaaaccgtacaaatcaattgccaaacg
ccggaaatggctaaattaccgacttggatctcacatagagccaaagctatggaattgcag
attgagccggaagccattcagttgctctgttatagctatgaaggaaatttattagcgcta
aaacaagcgttacagatgctgcaactccgctttaacgacggaaaaatttcactggctcgc
gctaaagaagtggtggaacaatccgctcaattttcaccatttcaatggattgatgcgtta
ttagaaggcaaaattgctcgtgcggaacgtattttaaaacatctacaaaacgaagaagtt
caaccggttgtcttgttacgtattattcaaaaagagctactggtgctactggaaattact
cgttctccgcaaccggtgcaaaatagcaatcagccgttatatatgggtaatttacgtgcg
gaattcgaccgcttgaaggtctggcaaaatcgccgtcctttttatcaagccgcagtacaa
cgcttaacgtataaaaaattgtatcaacttattcaacgcttagcggaattggaaaagcaa
gtaaaacaagaatttagagatgagatttggctggaattagaacgcttttccacctatttt
gaatag
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