Actinobacillus pleuropneumoniae JL03 (serotype 3): APJL_1294
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Entry
APJL_1294 CDS
T00644
Symbol
dnaQ
Name
(GenBank) DNA polymerase III epsilon chain
KO
K02342
DNA polymerase III subunit epsilon [EC:
2.7.7.7
]
Organism
apj
Actinobacillus pleuropneumoniae JL03 (serotype 3)
Pathway
apj03030
DNA replication
apj03430
Mismatch repair
apj03440
Homologous recombination
Brite
KEGG Orthology (KO) [BR:
apj00001
]
09120 Genetic Information Processing
09124 Replication and repair
03030 DNA replication
APJL_1294 (dnaQ)
03430 Mismatch repair
APJL_1294 (dnaQ)
03440 Homologous recombination
APJL_1294 (dnaQ)
09180 Brite Hierarchies
09182 Protein families: genetic information processing
03032 DNA replication proteins [BR:
apj03032
]
APJL_1294 (dnaQ)
03400 DNA repair and recombination proteins [BR:
apj03400
]
APJL_1294 (dnaQ)
Enzymes [BR:
apj01000
]
2. Transferases
2.7 Transferring phosphorus-containing groups
2.7.7 Nucleotidyltransferases
2.7.7.7 DNA-directed DNA polymerase
APJL_1294 (dnaQ)
DNA replication proteins [BR:
apj03032
]
Prokaryotic type
DNA Replication Elongation Factors
Elongation factors (bacterial)
DNA polymerase III holoenzyme
APJL_1294 (dnaQ)
DNA repair and recombination proteins [BR:
apj03400
]
Prokaryotic type
SSBR (single strand breaks repair)
MMR (mismatch excision repair)
DNA polymerase III holoenzyme
APJL_1294 (dnaQ)
SSDB
Ortholog
Paralog
GFIT
Motif
Pfam:
RNase_T
DNA_pol_A_exo1
Motif
Other DBs
NCBI-ProteinID:
ABY69850
UniProt:
B0BQL5
LinkDB
All DBs
Position
complement(1422235..1423008)
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AA seq
257 aa
AA seq
DB search
MSEQPIVRQVVLDTETTGMSFSGPPQIGHNIIEIGAVEVINRRLTGRTFHVYIKPPREVE
EEAIKVHGITNEFLQDRPVFAEVADEFIEFIKGAELIIHNAPFDVAFMDQEFSYLENPPP
KTAEMCSVTDSLAVARKMYPGKRNNLDALCDRLGIDNSKRVLHGALLDAEILADVFLMMT
GGQLALLGEEDASANHENIADLGLGTITKFETSGLIVLSLSEEEQTAHEEYLKLIDKKSK
GNCIWMRSNEMESEQIH
NT seq
774 nt
NT seq
+upstream
nt +downstream
nt
atgagtgaacaaccgatagtaagacaggtggtgctggataccgaaacaaccggtatgagt
tttagcggaccaccgcaaattggacataatattattgaaatcggtgcggtcgaagtgatt
aatcgtcgcttaaccggccgtacttttcacgtctatattaaaccgccgcgagaagtggaa
gaagaggcgattaaagttcacggcattaccaatgagtttttgcaagataggcctgtgttt
gccgaagttgcggacgaatttattgaatttattaaaggtgcagagctaatcattcataat
gcccccttcgacgtggcatttatggatcaagagttttcttatttggaaaacccaccgccg
aagacggctgaaatgtgcagtgtgaccgatagtcttgcggtcgctcgaaaaatgtacccg
ggcaagcgtaataacttagatgcattgtgcgaccgtttaggcattgataacagcaagcgt
gtacttcacggggcgttactggatgcggagattctggctgatgtattcttgatgatgact
ggcggacagctggcgttattaggtgaagaggatgccagtgcgaatcatgaaaatattgca
gatctcggtttaggtacgataacgaagtttgaaacaagcggtttaattgtgttatctctg
agtgaagaagagcaaacggcacacgaagaatatctcaaactgattgataaaaaatctaag
gggaattgtatttggatgcgctcgaatgaaatggaatcggagcaaattcactaa
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