Actinobacillus pleuropneumoniae JL03 (serotype 3): APJL_1340
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Entry
APJL_1340 CDS
T00644
Symbol
uvrD
Name
(GenBank) DNA helicase II
KO
K03657
ATP-dependent DNA helicase UvrD/PcrA [EC:
5.6.2.4
]
Organism
apj
Actinobacillus pleuropneumoniae JL03 (serotype 3)
Pathway
apj03420
Nucleotide excision repair
apj03430
Mismatch repair
Brite
KEGG Orthology (KO) [BR:
apj00001
]
09120 Genetic Information Processing
09124 Replication and repair
03420 Nucleotide excision repair
APJL_1340 (uvrD)
03430 Mismatch repair
APJL_1340 (uvrD)
09180 Brite Hierarchies
09182 Protein families: genetic information processing
03400 DNA repair and recombination proteins [BR:
apj03400
]
APJL_1340 (uvrD)
Enzymes [BR:
apj01000
]
5. Isomerases
5.6 Isomerases altering macromolecular conformation
5.6.2 Enzymes altering nucleic acid conformation
5.6.2.4 DNA 3'-5' helicase
APJL_1340 (uvrD)
DNA repair and recombination proteins [BR:
apj03400
]
Prokaryotic type
SSBR (single strand breaks repair)
NER (nucleotide excision repair)
GGR (global genome repair) factors
APJL_1340 (uvrD)
MMR (mismatch excision repair)
Other MMR factors
APJL_1340 (uvrD)
BRITE hierarchy
SSDB
Ortholog
Paralog
Gene cluster
GFIT
Motif
Pfam:
UvrD-helicase
UvrD_C
AAA_19
PcrA_UvrD_tudor
UvrD_C_2
AAA_30
Viral_helicase1
AAA_12
Motif
Other DBs
NCBI-ProteinID:
ABY69896
UniProt:
B0BQR1
LinkDB
All DBs
Position
1468739..1470937
Genome browser
AA seq
732 aa
AA seq
DB search
MDFSLLLDGLNDKQREAVVAPLGNYLVLAGAGSGKTRVLTHRIAWLIGVENVPESNILAV
TFTNKAAAEMRHRIEHTLSSSSHHRLFGMWVGTFHSIANRLLRSHYLDADLPQDFQIMDS
EDQQRLLKRLLKLHNIDEKHFPPKHVAWYISAQKDKGKRPKDIEHHNDPNEKKLVQIYQI
YQDACDRAGLLDFAELLIRAYELFRDKPPILQRYQQRFQQILIDEFQDTNNIQYDLIRLL
AGETGNVMIVGDDDQSIYGWRGAQVENIQRFLNDYQKAETIRLEQNYRSTGHILATANEL
ISNNEDRLGKNLWTDQGDGDPVEIYCAFNELDEARFVASQIKQWKEDEGSLNECAVLYRS
NSQSRVIEEALIQANIPYRIYGGMRFFERQEIKDALAYLRLIANRQDDAAFERVINTPPR
GIGERTLDTIRQITRNRQITLWQAIQVAVQEEQLSGRAASALLRFVELINALEQETEQMP
LFEQTDFVIKKSGLYEMYKQEKGEKGEVRIENLEELVTATKQFSKPDEAEEMSDLTAFLT
HASLEAGEAQASPHQDYVELMTLHSAKGLEFPRVFMVGVEEGIFPSGMSFDEGRLQEERR
LAYVGITRAKKKLTISYAELRRLYGKEERHIASRFIAELPEQHICEVRLRGSINRAASFA
PSTPFAKNSAKTTASCLEDNSWKMGQKVQHAKFGQGTIVNVEGSGEATRLQIAFAGNGIK
WLIAKMANLEKI
NT seq
2199 nt
NT seq
+upstream
nt +downstream
nt
atggatttttctttattattagatggtttaaacgataaacagcgagaggctgtcgttgcg
ccgttgggcaattatttagtattggcgggagccggttccggtaaaacacgagtgctgacc
catcgtattgcatggttaatcggtgtagaaaacgtaccggaatcgaatattctagcagtc
acctttaccaataaagcggcagcggaaatgcgtcatcgtatcgaacataccctttcttcc
agcagccatcaccgcctgttcggtatgtgggtcggtacgttccacagcattgccaaccgt
ttgttacgctcacattatcttgatgccgatttgccgcaagatttccaaattatggatagc
gaagatcagcaacgtttacttaaacgtttgttaaagctgcacaatattgatgaaaaacat
ttcccaccgaaacacgtggcgtggtatatcagtgcgcaaaaagataaaggtaaacgcccg
aaagatattgaacatcataacgatccgaacgagaagaaattagtccaaatctaccaaatt
tatcaagatgcatgcgatcgtgccggtttgttagattttgccgaattattgattcgagct
tatgagctatttagggataaaccaccgattttacagcgctatcagcaacgttttcagcag
attttgatcgatgagttccaagataccaacaatattcaatatgacttaatccgtctgctt
gccggtgaaaccggtaacgtgatgattgtcggcgatgacgaccaatcgatttacggttgg
cgtggtgcgcaggttgaaaatattcagcgtttcttgaatgactaccaaaaagcggaaacc
attcgtcttgagcaaaattaccgttcaaccggacatattttggcaaccgccaatgagtta
atttccaataacgaagaccgcttgggtaagaatttatggaccgatcagggcgatggcgat
ccggttgaaatttattgtgctttcaacgaattggacgaagctcgttttgttgcctcacaa
atcaaacaatggaaagaagacgaaggcagcctaaacgaatgtgcggtgttatatcgtagt
aacagccaatctcgtgtgattgaagaagcattgattcaagcgaatattccttaccgtatt
tacggcggtatgcgcttcttcgaacgccaagaaatcaaagatgcgctggcatatttacgc
ttgattgctaatcgccaagatgatgcggcatttgaacgagtgattaacacaccgccaaga
gggattggcgaacgcacgttagatacgattcgtcaaattacccgtaatcgccaaataacc
ttgtggcaagcgattcaagtggcggtacaggaagaacaactgtccggcagagccgcttcc
gccttactacgttttgtcgaattaattaatgcgctcgaacaagaaaccgagcaaatgcca
ctgtttgaacaaaccgattttgtgattaaaaaatccggtttgtacgaaatgtataaacaa
gaaaaaggggaaaaaggcgaagttcgtatcgagaacttagaagagctggttaccgccact
aaacaattcagcaagcctgacgaagcggaagaaatgtcggatctcaccgcatttttaact
cacgcttcattagaagccggcgaagcgcaagcctctccgcatcaagattatgtcgaatta
atgacgttacattcggcaaaaggcttagaattcccccgtgtatttatggtgggtgtggaa
gaaggcattttcccaagcggaatgagctttgacgaaggcagactgcaagaagagcgccgt
ttggcttatgtcggtattacccgcgcgaagaaaaaattgacgatcagttatgccgaactc
agacgtttatacggcaaagaagagcgtcatatcgcttctcgttttattgccgaattgccc
gagcagcatatttgcgaagtacgtttgagaggctctatcaatcgtgcggcaagttttgcc
ccaagcacgccttttgcaaaaaattcggcaaaaacgaccgcttcttgtttagaagacaat
agctggaaaatggggcaaaaggtgcaacacgctaaattcggacaaggcacgattgttaat
gtggaaggcagcggcgaagcgacccgtttgcaaatcgcctttgcaggtaacggtattaag
tggttgattgctaagatggcaaatttagagaaaatttaa
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