Actinobacillus pleuropneumoniae JL03 (serotype 3): APJL_1872
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Entry
APJL_1872 CDS
T00644
Symbol
rpoH
Name
(GenBank) RNA polymerase sigma-32 factor
KO
K03089
RNA polymerase sigma-32 factor
Organism
apj
Actinobacillus pleuropneumoniae JL03 (serotype 3)
Brite
KEGG Orthology (KO) [BR:
apj00001
]
09180 Brite Hierarchies
09182 Protein families: genetic information processing
03021 Transcription machinery [BR:
apj03021
]
APJL_1872 (rpoH)
Transcription machinery [BR:
apj03021
]
Prokaryotic type
Bacterial type
RNA polymerase
Sigma factors
APJL_1872 (rpoH)
BRITE hierarchy
SSDB
Ortholog
Paralog
Gene cluster
GFIT
Motif
Pfam:
Sigma70_r2
Sigma70_r4
Sigma70_r1_2
Sigma70_r3
HTH_3
HTH_10
IF2_N
Astro_VPg
GntR
HTH_25
DUF134
Motif
Other DBs
NCBI-ProteinID:
ABY70422
UniProt:
B0BT08
LinkDB
All DBs
Position
complement(2018663..2019613)
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AA seq
316 aa
AA seq
DB search
MKKFDEHEIEDAEIIEPDEIEVTESDNQPTEAMHPALVQGGMPVPQGNLDSYIRMANQYP
ILTAEQEKELAERYYYDEDVEAAKQLILSHMRFVIHIARGYLGYGLPLADLIQEGNIGLM
KAVKRFDPNVGVRLVSFAVHWVKAEIHEYVLKNWRIVKVATTKAQRKLFFNLRKNKNRLA
WFNEEEIQKVAEDLGVSPEEVREMESRMTGQDLGFDLPVGEDDDEVYTPSMYLEDNSSNF
ADDLEDEQYNGQATAQLAYALATLDERSQDIIKTRWLDEEKATLQDLAEKYGISAERVRQ
LENAALKKIKDAITFE
NT seq
951 nt
NT seq
+upstream
nt +downstream
nt
atgaaaaaattcgatgaacatgagattgaagatgcggaaattatcgagccggacgaaata
gaagtgacggaaagcgataatcagccgactgaggcaatgcaccccgctttggtacagggc
ggaatgccggtgccgcaaggtaatctcgacagctatattcgtatggcgaatcaatatccg
attctcaccgccgaacaagaaaaggaattggcggaacgctattactatgatgaagatgtt
gaggcggcaaaacagctaattctatcgcatatgcgttttgtgattcatatcgccagaggt
tatttgggatacggtttaccgcttgccgacttaattcaagaaggtaatatcggcttaatg
aaagcggtaaaacggtttgacccgaatgtcggcgtgcgcttggtatcttttgcggtacac
tgggtgaaagcggaaattcacgaatacgtattaaaaaactggcgtatcgtgaaagtcgct
acgaccaaagcgcagcgtaaactctttttcaatctgcgcaaaaataaaaaccgcttggct
tggttcaacgaggaagaaatccaaaaagtcgccgaagatttgggtgtttcgcccgaagaa
gtgcgagaaatggaatcccgtatgaccgggcaagatctcggttttgatttgccggtcggc
gaagacgatgacgaagtttatacgccgtcaatgtatttggaagataacagctctaacttt
gccgatgacttggaagacgagcaatacaacggacaagctaccgctcaattagcttatgcc
ttagcaacactggacgaacgtagccaagatattattaaaactcgttggttggatgaagaa
aaagcgactttacaagatctggcggaaaaatacggtatttccgccgagcgcgttcgccaa
ttggaaaatgcggcattgaagaaaatcaaagatgcgataacctttgaatag
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