Actinobacillus pleuropneumoniae JL03 (serotype 3): APJL_1927
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Entry
APJL_1927 CDS
T00644
Symbol
recC
Name
(GenBank) exodeoxyribonuclease V, gamma subunit
KO
K03583
exodeoxyribonuclease V gamma subunit [EC:
3.1.11.5
]
Organism
apj
Actinobacillus pleuropneumoniae JL03 (serotype 3)
Pathway
apj03440
Homologous recombination
Brite
KEGG Orthology (KO) [BR:
apj00001
]
09120 Genetic Information Processing
09124 Replication and repair
03440 Homologous recombination
APJL_1927 (recC)
09180 Brite Hierarchies
09182 Protein families: genetic information processing
03400 DNA repair and recombination proteins [BR:
apj03400
]
APJL_1927 (recC)
Enzymes [BR:
apj01000
]
3. Hydrolases
3.1 Acting on ester bonds
3.1.11 Exodeoxyribonucleases producing 5'-phosphomonoesters
3.1.11.5 exodeoxyribonuclease V
APJL_1927 (recC)
DNA repair and recombination proteins [BR:
apj03400
]
Prokaryotic type
DSBR (double strand breaks repair)
HR (homologous recombination)
RecBC pathway proteins
APJL_1927 (recC)
BRITE hierarchy
SSDB
Ortholog
Paralog
Gene cluster
GFIT
Motif
Pfam:
Exonuc_V_gamma
RecC_C
Motif
Other DBs
NCBI-ProteinID:
ABY70477
UniProt:
B0BTG3
LinkDB
All DBs
Position
complement(2082239..2085583)
Genome browser
AA seq
1114 aa
AA seq
DB search
MFTVFFSQKLSSLAALLIRLQQNDPNPNPFEPETVLVQSVGMAQWLQMQIADQTGVAAHY
QFPFPTSFLWQQYRVLFPELPKENIFERESVTWRLMRLIPKYLEKAEFESLNLYLNKDAR
QYPLKLYQLAGKIADLFDQYLVYRPHWLVHWESNRIEAVLNEILAAIAFREKNERDILAN
LRWQSMLWNALIEDIKADSDEEVFMTSHRAYLQQQYFEKLDNLTESEKSKLPKRIFVFGI
SSLPATQLAVLKKLSEHCEVYLFFLDPSQEYWAESVEDKTLEKLALKRQLSQQDLDALLA
EQGNQLLAMWGKQGREFLVQLVEQEPDNTIEVFDEYEGDSNLIKLKNAILNFNNEQRFGL
AEQDRSIQIHACHSVMREVEVLHNQLLQMFERNPTLAPKDIIVMSADIDKYAPYINAVFA
RYEKGDKRYIPFTLSDQKVTAVDPIIASFLMLLNLKESDFSAESLLDLLDVKALRERFNL
QEQDLQTLRHWVNQVGIRFGLHIQQDDWQNHNAWENGLTRLLLGTSLKAESGIWQDSIAF
NESYGLSATLVGFLAKFIENLTAWYEFIQQDHTLEEWKARIQKLIGEFYQESNESLDALL
LLNSTLEEVANKAEQAEFSESIGIEIIRLLLEDKLNQQQSSLQFLAGKVNFCTLLPMRAI
PFKVVCLLGMNEADFPRQHSVNSFDLMQYAPKRGDRARRDDDRYLFLEALLSAQEIFYLS
YIGQSTTDNKQRLPSVLVSQLLDYLAEHLTEQARLQASEKDSFSEALFWQKMVVQQPLTV
FSPKNFTPQYGSYDKEWLLEQQHEPLADFLNKSFDLKAEIPTEINLEDLIAFVSNPIKYF
FNHQLGVYFRNDEESIAESEKFSLSDLDDYQLRDQLVTLEPAEREAFFKQEQLKGNLPIA
NFAKVSLQDLDDSINELRELILPYLGESDILEIERLFEVEQLKIRLFGNIRNKFADEIVF
WKVSSLKDKDYIRLWIYYLLIQAQGLNLELTAIARSKEKAEIFRFNQVSAEQAFSQLQTY
ISAYVTSFRQLTWGIWTDLDNYFEKLSDKQNVAEYCQQQLSALMDKQYFEKSYLQRVLQQ
SSQLDYAQIHTVTLEWFELMQQSKPTKTKIKEKK
NT seq
3345 nt
NT seq
+upstream
nt +downstream
nt
atgttcacggtctttttctctcaaaaactttcatctttagccgcattacttatccgttta
caacaaaacgacccgaatcccaatccgttcgagccggaaaccgtcttagtacaaagtgtc
ggaatggcgcaatggctgcaaatgcaaattgccgatcaaaccggtgtcgccgctcattat
caattcccgtttccgaccagttttttatggcaacaatatcgtgtactgtttccggaattg
ccgaaagagaatatttttgaaagagaaagcgtaacgtggcgcttaatgcgtttaattccg
aagtatttagagaaagcggaatttgaatcgcttaatctctatttaaataaagatgctcgc
cagtacccgttaaagctatatcaattagccggcaaaattgccgatttattcgaccaatat
ttagtttaccgtccgcattggctggtccattgggaaagcaatcggattgaagcggtatta
aacgagattttagccgcaattgcgtttagagaaaaaaatgaacgggatattttagcgaat
ttacgctggcaatcgatgttatggaacgcattaattgaagacattaaagctgatagcgac
gaagaagtctttatgacttctcatcgtgcttatttgcaacaacaatattttgagaaattg
gataatttaaccgagtccgagaaatcgaaattgcctaagcgtatctttgtcttcggtatt
tcttcactgccggcgacgcagcttgcggtattgaaaaaattaagtgaacattgcgaagtt
tatttgttctttttagatccgagccaagaatattgggcggagagtgtggaagataaaacg
ttagagaaactggcgttaaaacggcagctttcgcaacaggatctcgatgcgttattggcg
gaacaaggcaatcaattgctggcgatgtggggtaagcaaggacgtgaatttcttgtgcaa
ttagtcgaacaagaaccggataacacgatagaagtgtttgatgaatacgaaggcgattcc
aatctgattaaactaaaaaatgccattttaaattttaataacgaacagcgattcgggctt
gccgaacaggatcggtcgatacaaattcacgcttgccatagtgtgatgcgagaggttgag
gtactgcacaatcaattattacaaatgtttgagcgaaacccgacgctcgcgcctaaagat
attattgtgatgtcggcggatattgataaatacgcgccttatattaatgcggtatttgcc
cgttatgaaaaaggcgataagcgttatattccgtttaccctttccgaccaaaaagtgacc
gctgtcgatccgattattgccagctttttaatgcttttaaatctgaaagagagcgatttt
agtgcggaatcattgttggatttattagatgtaaaggcattgcgagaacgttttaattta
caagagcaggatctgcaaaccttgcgccattgggttaatcaagtcgggattcgtttcggg
ctacatattcaacaagatgactggcagaatcataatgcgtgggaaaacggtttaacccgt
ttattgcttggcaccagcttaaaagcggaatccggcatttggcaggatagtatcgcattt
aacgagagttacggtttatcggcgacattagtcggctttttggcaaaatttatcgaaaat
ttgaccgcttggtacgagtttattcaacaagatcatacgcttgaggaatggaaggctcgt
attcaaaaattaatcggcgaattttaccaagaatcgaacgaaagtttggatgcgctcctg
ttattgaatagcacgttggaggaagtggcgaataaggcggaacaggcggagtttagcgaa
agtatcgggattgaaataatacgcttattgctggaagacaaactgaatcaacagcaaagc
agcttgcagtttttagccggtaaagtgaatttctgtaccttattaccgatgcgtgccatc
ccgtttaaagtggtttgtttactggggatgaatgaggcggattttcctcgccaacattcg
gtcaatagttttgacttaatgcaatacgccccgaaacgaggcgaccgagccagacgagat
gacgaccgctatttatttttagaagcgttactttcggcgcaagagattttttatctaagt
tatatcggacaatcgaccaccgataataagcagcgattgccgtcggtactggtttcgcag
ttattggattatttagcggagcatttaaccgaacaagcccgtttacaagcgagtgaaaaa
gacagtttttccgaagcattattttggcaaaaaatggtggtacaacaaccgcttaccgta
tttagtccgaagaactttacgccgcaatacggttcttatgataaagagtggttattggaa
cagcaacacgaaccgttagcggattttctaaataagtcgttcgatttaaaagcggagata
ccgaccgagattaatcttgaagatttaattgcctttgtaagtaatccgattaagtacttc
tttaatcaccaattaggtgtttatttccgcaatgatgaagaaagtatcgcagagagcgaa
aaattctcgcttagtgatttggacgattatcaattacgtgatcagctggtgacattggaa
ccggcggaacgagaagcattttttaagcaagaacaattaaaaggaaacttaccgattgcc
aactttgctaaagtttcgctacaagatttagacgactcgattaatgaattacgggagtta
atcctaccatatttaggcgaaagcgatattttggaaattgagcgattattcgaggtcgag
caactgaaaattcgcttgttcggtaatattcgcaataaattcgccgacgaaattgtgttt
tggaaagtcagctcgttgaaagataaagattatattcgtttgtggatttattacctgtta
attcaagctcaaggtttaaatctcgagttgacagcaattgcccgtagtaaagagaaggcg
gagatattccgattcaatcaagttagtgcggaacaagccttttctcaattacaaacttat
atttccgcttatgtaacgtcttttagacaattaacgtgggggatttggacggatttagac
aactattttgagaagctgtccgataaacaaaatgtggcggaatattgccagcaacaatta
tccgcattaatggataagcagtattttgagaaaagttacttacaacgagtgttacaacaa
agttcacaattggattacgcccaaattcataccgtgaccttggaatggttcgaattaatg
caacaaagtaaaccgacaaaaaccaaaattaaggagaagaaatga
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