Actinobacillus pleuropneumoniae JL03 (serotype 3): APJL_2056
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Entry
APJL_2056 CDS
T00644
Symbol
holD
Name
(GenBank) DNA polymerase III psi subunit protein
KO
K02344
DNA polymerase III subunit psi [EC:
2.7.7.7
]
Organism
apj
Actinobacillus pleuropneumoniae JL03 (serotype 3)
Pathway
apj03030
DNA replication
apj03430
Mismatch repair
apj03440
Homologous recombination
Brite
KEGG Orthology (KO) [BR:
apj00001
]
09120 Genetic Information Processing
09124 Replication and repair
03030 DNA replication
APJL_2056 (holD)
03430 Mismatch repair
APJL_2056 (holD)
03440 Homologous recombination
APJL_2056 (holD)
09180 Brite Hierarchies
09182 Protein families: genetic information processing
03032 DNA replication proteins [BR:
apj03032
]
APJL_2056 (holD)
03400 DNA repair and recombination proteins [BR:
apj03400
]
APJL_2056 (holD)
Enzymes [BR:
apj01000
]
2. Transferases
2.7 Transferring phosphorus-containing groups
2.7.7 Nucleotidyltransferases
2.7.7.7 DNA-directed DNA polymerase
APJL_2056 (holD)
DNA replication proteins [BR:
apj03032
]
Prokaryotic type
DNA Replication Elongation Factors
Elongation factors (bacterial)
DNA polymerase III holoenzyme
APJL_2056 (holD)
DNA repair and recombination proteins [BR:
apj03400
]
Prokaryotic type
SSBR (single strand breaks repair)
MMR (mismatch excision repair)
DNA polymerase III holoenzyme
APJL_2056 (holD)
SSDB
Ortholog
Paralog
GFIT
Motif
Pfam:
DNA_III_psi
TPR_EMC2
TelK_stirrup
Motif
Other DBs
NCBI-ProteinID:
ABY70601
UniProt:
B0BU34
LinkDB
All DBs
Position
2198407..2198799
Genome browser
AA seq
130 aa
AA seq
DB search
MNIPQWVLTKPQVLKGDAQIRLDNAVKLVVVCEENHQASGLFLDILRTLQLQPNQYQWLD
AEQAQRLAFEHHPIFWLIQSELQAVEIAKKFANQTAWQHSSWKDLTNVTTKRQLWRQMAA
FCQHFEENHD
NT seq
393 nt
NT seq
+upstream
nt +downstream
nt
atgaatattcctcaatgggtgctgacaaaaccgcaagtattaaagggcgatgcgcaaatt
cgcttggataacgcggtgaaactggttgtggtatgtgaagagaatcatcaagctagcggt
ctgtttttggatattttacgcaccttgcagttacagccgaaccaatatcaatggttggat
gcggaacaagcccagcgtttagcttttgaacatcatcctattttttggctaatccaatca
gaattacaagcggttgaaattgcaaaaaaatttgcaaatcagaccgcttggcagcatagc
tcgtggaaagatttaactaatgtcacaactaaacgccaactttggcgacaaatggcggca
ttttgtcagcattttgaggaaaatcatgattga
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