Acetobacter pasteurianus 386B: APA386B_1003
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Entry
APA386B_1003 CDS
T02786
Symbol
polA
Name
(GenBank) DNA polymerase I
KO
K02335
DNA polymerase I [EC:
2.7.7.7
]
Organism
apk
Acetobacter pasteurianus 386B
Pathway
apk03030
DNA replication
apk03410
Base excision repair
apk03420
Nucleotide excision repair
apk03440
Homologous recombination
Brite
KEGG Orthology (KO) [BR:
apk00001
]
09120 Genetic Information Processing
09124 Replication and repair
03030 DNA replication
APA386B_1003 (polA)
03410 Base excision repair
APA386B_1003 (polA)
03420 Nucleotide excision repair
APA386B_1003 (polA)
03440 Homologous recombination
APA386B_1003 (polA)
09180 Brite Hierarchies
09182 Protein families: genetic information processing
03032 DNA replication proteins [BR:
apk03032
]
APA386B_1003 (polA)
03400 DNA repair and recombination proteins [BR:
apk03400
]
APA386B_1003 (polA)
Enzymes [BR:
apk01000
]
2. Transferases
2.7 Transferring phosphorus-containing groups
2.7.7 Nucleotidyltransferases
2.7.7.7 DNA-directed DNA polymerase
APA386B_1003 (polA)
DNA replication proteins [BR:
apk03032
]
Prokaryotic type
DNA Replication Elongation Factors
Elongation factors (bacterial)
Other elongation factors
APA386B_1003 (polA)
DNA repair and recombination proteins [BR:
apk03400
]
Prokaryotic type
SSBR (single strand breaks repair)
BER (base exicision repair)
DNA polymerase I
APA386B_1003 (polA)
NER (nucleotide excision repair)
GGR (global genome repair) factors
APA386B_1003 (polA)
BRITE hierarchy
SSDB
Ortholog
Paralog
Gene cluster
GFIT
Motif
Pfam:
DNA_pol_A
5_3_exonuc_N
5_3_exonuc
DNA_pol_A_exo1
HHH_5
DprA_N
HHH_2
HHH
RNase_H_2
Motif
Other DBs
NCBI-ProteinID:
CCT59103
LinkDB
All DBs
Position
1051083..1053884
Genome browser
AA seq
933 aa
AA seq
DB search
MTETPHLVLVDGSGFIFRAFHALPPMTSPEGVPVNAVYGFTTMLARLLKDHVGTHLAVLF
DASRQTFRSEIYPQYKAHRPEPPEDLRPQFSLIREATQAFNVPGIELPGWEADDLIASYA
TAIRAQGGTCTIVSSDKDLMQLVGDGVCMLDPIKQTPVGPTEVETKFGVPPTKVVDVQAL
MGDPTDNVPGVPGIGPKTAAALVQEYGTLEAVLNAAPEMKKSKRRDMLIEHADAARVSLQ
LVTLATDVPLPVPVEELGTREPDMLVLADWLDRMGFRSILSRMGLGHPSGAHAHRAARKV
AAASVAGATTPADNASAPDASVLSAPYHDYETVRTAEALQKWVSAAQEAGICAVDTETDG
LDPLAANIVGFSIATAPGKACYVPLKHEGTLEAPTGEQLAVDAALKLLALLLQDDAVLKI
FHNAKFDLLILDHAGIPLSSITAVDDTMLISYSQSAGLHGQGMDELSALHLSHTPITYDS
VTGTGRNRLPFAQVPVETATKYAAEDADVTLRLWHVLHPTLRTNKALVLYEQIERPLSAI
LADMEKAGIAVDRAELDRLSKDFEARMQGMENDIYEAAGRQFNIGSPKQLGEILFDEMGL
KGGKRGKAGAWSTDSSVLQDLADQGHDLPARILAWRQLAKLKSTYTDALLRQAGRNDRVH
TSFQMAITSTGRLSSTDPNLQNIPVRTEEGTRIRQAFIAPPGKKLISADYSQIELRLLAD
VANIPALREAFQLGQDIHARTASEVFNIPLEGMDALTRRRAKAINFGIIYGISAFGLSKQ
LGIPAGEARTYIDAYFARYPGIRDYMERMREEARTHGYVLTPFGRRCYVPGIHEKSAARR
QYAERQAINAPLQGGAADIIKRAMVHLPLALQKAGFGETRMLLQVHDELLFETDESEAEA
VAAIIKNVMEAAADLAVPLVVETGIGQNWAEAH
NT seq
2802 nt
NT seq
+upstream
nt +downstream
nt
atgacagaaacaccccatctggttctggtagatggcagcggctttattttccgcgccttt
catgccctcccgcctatgaccagcccggaaggtgtaccagtaaatgccgtttacggcttt
accaccatgctggcccgtttgcttaaagaccatgtaggcacccatctggcagtgctgttt
gatgccagccgccagacattccgctcagaaatctatccgcaatataaggcgcaccggcct
gaaccgcctgaagatttgcgtccccagttcagcctgatcagggaagccacgcaggccttc
aatgtgccgggcatcgaactccccggctgggaggcagatgacctgattgcatcctatgca
acggccattcgggcacagggtggcacgtgcaccattgtttcatccgacaaggatctgatg
caactggtgggagacggcgtttgcatgctggaccctatcaaacagacaccagttggccct
actgaggtagaaaccaaatttggtgtgccccccacaaaagtggtggatgtacaggccctg
atgggagaccccacagataacgtgcccggcgtgcctggtattggccccaaaacagcagca
gcacttgtgcaggaatacggcacactggaagctgtgctgaacgctgcaccggaaatgaaa
aaatccaagcggcgtgacatgctaatcgaacacgccgatgcggcacgtgtttctctccag
ttggtcacccttgccactgacgttccactacccgtgccggtagaagagcttggcacgcgt
gagccagacatgctggttttggccgactggctggaccgtatgggctttcgctccattctc
agccgtatggggcttggccacccttctggtgctcacgcacatcgtgctgccagaaaagtc
gccgcagcatcagtcgccggggcaaccacacccgctgacaatgcatcggcccctgatgca
tctgtgctttctgccccgtatcatgattatgaaaccgtgcgcacagcagaagccctgcaa
aaatgggtgagcgcagcgcaggaagccgggatctgtgctgtagatacagaaacggatggg
ctagacccacttgctgccaatattgtcgggttttctattgcaacggctccaggcaaagcc
tgctatgtgcccttaaaacatgaaggcacgctggaagcccctacaggcgaacagcttgcg
gttgatgcagcccttaaactgctggcacttcttttgcaggacgatgccgttttaaagatt
ttccataatgccaagtttgatctgctcattctggatcatgcgggcatccctctttccagc
attaccgctgtagatgacacaatgctgatctcttacagccagtctgccgggctgcatggg
caaggcatggatgagctttctgctctgcatttaagccatactcccatcacgtatgacagt
gtaacaggcactggtcgcaaccgcttgccttttgcacaagtgcctgttgaaacagccacc
aaatatgcggctgaagatgccgatgttaccttgcgcctatggcatgttctgcaccccacg
ctgcgcaccaataaggcactggtgctttatgagcagattgaacgcccgctttcggccatt
ctggcggacatggaaaaggcaggcattgcagtagatcgcgcagaactggatcgactttcc
aaggactttgaagcccgcatgcagggcatggaaaacgatatttacgaagccgccggtcgg
cagtttaatattggttcccccaaacagcttggggaaatcctgtttgatgaaatgggcctg
aaaggcggcaaacgcggcaaggctggggcttggagcacagattcctctgtcttgcaggat
ctggccgaccaagggcatgatctgcctgcacgcattctggcatggcggcagcttgccaag
ttgaaatccacttatacggatgcactgttacgccaagccggccggaatgaccgcgtgcac
acatctttccagatggcgatcacttccacagggcgcttgtcttctacagaccccaacctg
caaaatattcctgtgcgcacggaagaaggcacacgtatccggcaggcctttattgctcct
ccgggcaagaagctgatttctgctgactactcacaaatcgaactgcggctactggccgat
gttgccaatattcccgcattgcgtgaggcttttcagcttgggcaggatattcacgcccgc
acggcatcggaagttttcaatatcccgcttgagggtatggatgccctgacacggcggcgc
gccaaagccattaactttggcattatttacggcatttcggcttttgggcttagcaaacag
cttggcattccggctggtgaagcacgcacttacatagatgcgtattttgcccgttacccc
ggcatccgtgattacatggagcgtatgcgcgaagaagcacgcacccatggctatgtgctc
acaccttttggccgacgctgctacgtgccgggcattcatgaaaaaagtgctgccagacgc
caatatgccgaacggcaagctattaatgcccccttacagggtggcgctgctgacattata
aaacgcgccatggtgcatttgccattggccctgcaaaaggcaggctttggcgaaacacgc
atgcttttgcaggtgcatgatgaactgttgtttgaaacagatgaatcagaagccgaagca
gtagctgcaattattaaaaacgttatggaagcagcagcagatcttgctgtacccttggtt
gtagaaaccggaataggccagaattgggcggaggcacattaa
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