Acetobacter pasteurianus 386B: APA386B_1416
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Entry
APA386B_1416 CDS
T02786
Symbol
addA
Name
(GenBank) double-strand break repair helicase AddA
KO
K16898
ATP-dependent helicase/nuclease subunit A [EC:
5.6.2.4
3.1.-.-]
Organism
apk
Acetobacter pasteurianus 386B
Brite
KEGG Orthology (KO) [BR:
apk00001
]
09180 Brite Hierarchies
09182 Protein families: genetic information processing
03400 DNA repair and recombination proteins [BR:
apk03400
]
APA386B_1416 (addA)
Enzymes [BR:
apk01000
]
5. Isomerases
5.6 Isomerases altering macromolecular conformation
5.6.2 Enzymes altering nucleic acid conformation
5.6.2.4 DNA 3'-5' helicase
APA386B_1416 (addA)
DNA repair and recombination proteins [BR:
apk03400
]
Prokaryotic type
DSBR (double strand breaks repair)
HR (homologous recombination)
AddAB pathway proteins
APA386B_1416 (addA)
BRITE hierarchy
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Ortholog
Paralog
Gene cluster
GFIT
Motif
Pfam:
UvrD-helicase
UvrD_C
UvrD_C_2
PDDEXK_1
AAA_19
DEAD
Motif
Other DBs
NCBI-ProteinID:
CCT59501
UniProt:
S6DAU8
LinkDB
All DBs
Position
complement(1487336..1490908)
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AA seq
1190 aa
AA seq
DB search
MSISAQKALQNAISQANAQQALASDPSASVFVSASAGSGKTKLLIDRLLRLMLPRLAEDG
SILPGSSPARILCLTFTKAAAAEMSIRLQKRLGRWVTLSDEELDKELAELYVPCTEETRR
RARALFAEVLDLPGGMRIGTIHAFCQSLLRRFPLEASMNPHFTVMEETDASLALQACVEA
ILGQQKEGVISSLAGQISLGDFIFISGVLRKDERSSSLLKLVVEDFDKAEAVLCQILGLS
PDILHGSTSEFLEKSCTNFPEEQNLREGFQILSEEGSEAIKRNAFSLLDWLALPASERAA
QWSVWRNGFLTKEGKLRSVGLISKKLSEKYSDISVYIQKESERISKVEEHLRARKLAEMG
SALLKMAAAVSSLYTTQKARHGQIEYDDLIQRALGLLREPGAAWVMYKLDGGIDHLLLDE
VQDTSPEQWRIAGDLTEEFFAGLGGRSEDEPPRTVFAVGDYKQSIYGFQGADPDSFREWR
QKFKKRVQDAHLLWREPELTVSFRSTTPVLRLVDAVFADPEAAKGVVEEPGQIMEHITAR
PGEGGRVELWPLVEAEKEEDVISPWEPAQGNATRQSPRQKLADAVAGYIFRQLNQKTLSG
QKPLTPGDVLVLVPRRSPFVGMLVRALKGHNIPVVTLVRTGLAEHLAVQDMLSLCAALLL
PQDDLTLACVLTSPLGGVSDNSLMALAAGREKGEPLWSALRERHAEQSDWKQAWNFLNGL
FRQVDYLTPYEFLSAALGPGGARARFLARLGPEAAEPIDELLSAAIRYQDQHPPSLQGFL
HWMRHSEETVKREAEAGGDSVRIMTAHGSKGLQARLVILPDTVGLPRFEERLFWAHDKKQ
NIDVPLYVPRNALSVGLTRSLKDVMRSRVVEEYNRLLYVALTRAADRLVVCGWKPGRNVP
AESWYERCRIGFEKAGATEIDFQEGGWSGSMLLLEETPQEEANPKKSVPTSVEKGEDTAL
LPQWMGTAPLWKPTLPEAESPLARPLAPSKPDDAMLGPLPPVRSPLDIAAVTPAKAREVA
FRRGNLVHSLLQFLPACPVEQQPAMAHQWLARPASGLSSHEAAELAQQVIAVLRLPELAD
LFDPSARAEQRLAGVAGGRVIVGQVDRLRVLPNKVLVCDFKTGRHAPRRVEDTPVLYLRQ
MAAYRALLQGIWPDRPVVCVLVWTEMPRADVLPDALLDKYAPGILPAAVS
NT seq
3573 nt
NT seq
+upstream
nt +downstream
nt
atgagcatatctgcacagaaggctttacaaaacgctatttctcaggccaatgcgcaacag
gccctggcatcggatccttcagcatcagtttttgtttctgcttctgcgggaagcggtaaa
accaaactgcttattgatcgcctcttgcgcctgatgttgccgcgtttggcagaagatggt
tctatcctgcccggaagttctcctgcccgtattttgtgtctgacttttaccaaggcagcc
gcagcagaaatgtctattcgtctgcaaaagcgccttggccgttgggtaacattatcagat
gaagaattagataaagaactagccgagttgtacgttccctgcacagaggaaacacggcgg
cgtgcacgggcattatttgcagaagtgcttgatcttccagggggtatgcgtattggaaca
atccatgcattttgccaatctctgttgcggcgttttcctcttgaagcttccatgaatccg
cactttacggttatggaagaaacagatgcctccttggctttgcaggcgtgtgtagaagct
attttaggtcagcagaaagaaggtgttatctcttccttggctggtcagatatctttggga
gattttatttttatttcaggtgttttgagaaaagatgagagatcatcttccttgttgaaa
cttgttgtggaagattttgataaggctgaggctgtattatgccagatactagggttgtcg
cccgatatactacatggaagcacttctgaatttcttgaaaaatcatgcacgaactttcca
gaagaacaaaatttaagagaggggtttcagattctttctgaggagggatccgaagcaata
aaaaggaatgctttttctcttttggattggttggccctgcctgcatcagaacgtgcagca
caatggtctgtgtggcgcaatggttttcttacaaaagagggaaaactacgctctgttggt
ttgatttctaaaaaactttctgaaaaatactctgatatttcagtctatattcaaaaagaa
tctgaacgtatttccaaggtagaggaacatctgcgcgctcgaaaactggccgaaatggga
agcgcattgcttaagatggcagcggctgtttctagcctctatacaacgcaaaaagcacgt
catggtcaaattgagtatgatgatcttattcaacgtgcattagggcttttgcgagaacct
ggtgctgcatgggtgatgtataagctggatggcggcatagaccatttattgctggatgag
gtgcaggatacctctcctgagcaatggcgtattgcaggcgatctgacagaagaatttttt
gcaggccttggtgggcggagtgaagatgagccgcctcggactgtttttgccgtaggggat
tataagcagtccatttacggatttcagggggcagatcctgattcttttcgggaatggcgc
cagaagttcaaaaagcgtgttcaagatgcacatttattatggcgtgagcctgaactcacg
gtttctttcagatcaaccacaccggttcttagacttgttgatgctgtttttgcagatcca
gaggcagctaaaggggttgtggaagaacctggtcaaattatggaacatattactgcacgt
cccggcgaaggtgggcgtgtagaattatggccgttggttgaggccgaaaaggaagaagat
gttattagcccgtgggagccagcacaagggaatgcaacgcggcagagcccacgccagaaa
ttggcagatgctgtagcagggtatatttttaggcagttaaatcaaaaaaccttatctgga
caaaagcctttaacgccaggtgatgttttggttcttgtgccacgtcgttcaccatttgtc
gggatgctcgtgcgtgccttgaaaggccataacattcctgtagttacgcttgtgcgtaca
gggttggccgagcatctggctgtgcaggacatgctttctttgtgcgcagcactcctgttg
ccacaagatgatttaacattagcttgtgtgcttacttctccgctaggtggcgtgtcggac
aatagcttgatggctttggctgctgggcgtgaaaaaggagaaccgttgtggtcagcgctt
cgagagcgtcatgcagagcagtcagattggaaacaggcttggaattttctgaatggtttg
ttcaggcaggtagattatttaacgccctatgagtttctttctgctgcattggggccgggg
ggggcgcgtgcacggtttcttgcccgattggggccagaagcagcggaaccaattgatgaa
ctactttctgcagcaataaggtatcaggatcagcatccaccttctttgcaggggtttctg
cattggatgcgtcattctgaagaaaccgtgaagcgggaagctgaagctggcggagattcc
gtaagaatcatgacagctcatggttctaaagggttacaggcccgtctggtcattttgcca
gatacagttggtctcccacgttttgaggaaagattgttttgggcgcatgataaaaaacaa
aatatagatgtgcctttgtatgtgccgcgtaatgctttgtctgttggcttaacgcgtagc
ttaaaagacgtgatgcgtagccgtgtggtagaggaatataatcgcctgctgtacgtagcg
cttacacgtgcggcagatcggctggttgtttgtggctggaagccaggacgcaatgtgcca
gcagaaagttggtacgaaagatgccgaattggttttgaaaaagcaggtgcgacagaaata
gactttcaggaaggtggatggtctggctcaatgctgcttctggaagaaacgccacaggaa
gaagccaaccccaaaaaatctgtcccgacttctgttgagaagggcgaagatacagccttg
ctaccgcaatggatgggaactgctccgttgtggaaacctactttgccagaagctgaaagc
ccactggcgcgcccgttggcaccaagtaaaccagatgatgccatgttggggccgttaccc
cctgtacgttcgccgttggacattgctgccgtaacgccagctaaagcgcgtgaggtagct
tttcggcgtggtaatctggtacattctttgttgcagtttttgcctgcctgtccggtagag
cagcaacctgctatggcgcatcagtggttggcgcggccagcaagtggtttgtcatcacat
gaagctgccgaacttgcacaacaggttattgcagttttgcgtctgcctgagctggcagat
ctgtttgatccgtctgcacgggcggaacagcgtttggccggtgtggcgggcgggcgggtt
attgtggggcaggttgaccgtttacgtgtgctgcccaacaaagtgttggtgtgtgatttt
aaaaccggccgccatgccccccgtagggtagaggatacacctgttctatatctccggcag
atggcagcttatcgtgcccttctgcaaggcatatggcccgatcggcccgtagtctgtgtt
ttggtctggacagaaatgccacgtgcagatgttctgccagatgcgttgctggataagtat
gcgcccggcattttgcctgcggctgtatcttga
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