Acetobacter pasteurianus 386B: APA386B_1417
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Entry
APA386B_1417 CDS
T02786
Symbol
addB
Name
(GenBank) double-strand break repair protein AddB
KO
K16899
ATP-dependent helicase/nuclease subunit B [EC:
5.6.2.4
3.1.-.-]
Organism
apk
Acetobacter pasteurianus 386B
Brite
KEGG Orthology (KO) [BR:
apk00001
]
09180 Brite Hierarchies
09182 Protein families: genetic information processing
03400 DNA repair and recombination proteins [BR:
apk03400
]
APA386B_1417 (addB)
Enzymes [BR:
apk01000
]
5. Isomerases
5.6 Isomerases altering macromolecular conformation
5.6.2 Enzymes altering nucleic acid conformation
5.6.2.4 DNA 3'-5' helicase
APA386B_1417 (addB)
DNA repair and recombination proteins [BR:
apk03400
]
Prokaryotic type
DSBR (double strand breaks repair)
HR (homologous recombination)
AddAB pathway proteins
APA386B_1417 (addB)
BRITE hierarchy
SSDB
Ortholog
Paralog
Gene cluster
GFIT
Motif
Pfam:
PDDEXK_1
Motif
Other DBs
NCBI-ProteinID:
CCT59502
LinkDB
All DBs
Position
complement(1490905..1493994)
Genome browser
AA seq
1029 aa
AA seq
DB search
MKLATIPAHLPFLDQLALRWIEAAHHNIEAIGEGIIVLPGRRAARALTEAFLRHMDGQSV
LLPRIVPIGALDEAELGLSAGIGGELALDLPPAVAGMTRLAVLARLVLQADKAFGTRPTL
DQAWPLAKALADLMDEAEWSGVNLAERLPEAVQENFAEHWQIILRFLEIVTQAWPEWLKE
NGVMNPVARQVALLEAQANLWRKLAQQGEITPIWAAGFTHVMQPTVKVLQAVLECPAGKI
ILPGLDMMMAEETFLSLPDSHPQAGLSSLLKNLEITRDKIEVWEGEGEGSERAATLARVL
LPAEALGDWSHSGGAELENVYRLDAADQQEEAVAISMIMREAIEKPAHRVALVTPDRVLA
ARVATELARWGVLADDSAGSSLVDTPAAVLLRLVAQMVDSKFSPVSLLSVLKHPLVACGF
AAGVCRATARLLERAILRGPAPPPGFAALCQVVKSALENPNERAKAKLEGGVTADRPFGP
VALSVFMERLEFCLEPVLGWELDAAEAGMQIAQDLEQHCAPVPDLLAALIATVERLVATD
EESASERLWRGEEGNLLASQLTELMLASEVLPPQPPVVLDGLLTAVLAPERVAMRRGGDP
KSLHPRVLIWGLFESRLQTAETVILGGLSEGVWPPVVDAGPWMSRPMRQRMGLPSPEQAV
GQAAHDFFASAAAAGTVILSSARRREGAPVVPARWLTRLDAFLAGRKGHIPNHPALLWLN
KLDQPVGPAIPVAPPQPMPPVALRPRRLSVTEIETWIRDPYAIYAKHILRLEVLPELEEA
ADASDYGMIVHKALERWVKAYGVTWPDNAEKKLCDLFSASLQEHVLRPALRAWWAPRLTR
IAQWVVQAEEKRRNEHGVPRAILTEIRGRVSIMDAPGGKFDIVGRADRIELNADGHVIVQ
DYKTGTLPSAKDVLAGWSPQLPLEAAMIIRGGFKEVPEHSREISDLIYWRLTGGAEPGEE
VVVKTREALSLTDLAEQTWENLLLRIAAYDQPDQPYLSHPHPGREPRFADYARLARVPEW
NSARKEDEE
NT seq
3090 nt
NT seq
+upstream
nt +downstream
nt
atgaaacttgcaacaattcccgcgcatcttccttttctggaccagcttgccttacgttgg
atagaagctgcacatcataatatagaagctataggtgagggcattattgtattgcccggt
aggcgtgccgcacgtgcattaacagaagcctttttgcgccatatggatgggcagagtgta
ttgctgccccgtattgtacctattggtgcgttggatgaagcggaacttgggttgtctgct
ggcataggtggcgaactggcattggatctgcctcccgctgtcgctggaatgacaaggctt
gctgtgttggcccggctggttttgcaggcagataaagcatttggcacgcggccaacgtta
gatcaggcatggccactggcaaaagctctggcagatttaatggatgaggcagaatggtct
ggcgttaatctggcagaacgtttaccagaagctgtgcaggaaaattttgctgaacattgg
caaattattttaagatttctcgaaattgtaacacaagcatggcctgaatggctcaaggaa
aatggggtgatgaaccctgtggccagacaggtggcattgcttgaggcacaggccaattta
tggcgtaaacttgcgcaacagggtgagattacacctatatgggctgcagggtttacgcac
gttatgcagcctacagtaaaagtgttgcaggccgttctggagtgtcccgcaggcaagatt
atattgcctggcttggatatgatgatggcagaagagacttttctttccttgccagacagt
caccctcaggctggactaagttctttactaaaaaatttagaaatcacacgagataaaatt
gaagtttgggaaggtgaaggtgagggatctgagcgtgcagctactcttgcacgtgttctt
cttccggccgaagctttgggtgattggtctcattcaggtggggctgaattagaaaatgtt
tacagactagatgccgctgatcagcaggaagaagctgttgcaatcagtatgatcatgcgt
gaggctattgaaaaacctgcgcatcgtgtggctcttgtaacacccgatcgtgtgttggct
gcacgtgtcgccacagagctggcgcgatggggtgtactggcggatgatagtgcaggttca
tcattggtagatacaccagcggctgttctgttgcgccttgttgcgcaaatggtagatagc
aagttttcgcccgtatctcttttaagtgttttaaaacatcctttggttgcatgtggtttt
gcagcaggtgtctgccgtgcaacagcgcgccttttggaacgtgctatattacggggtcca
gctccgcctcctggttttgccgctttatgtcaggttgtgaaaagtgctttagaaaacccg
aatgaaagggcaaaagccaagctagaagggggcgttacggctgatcgcccttttggtccg
gttgcattgtctgttttcatggagcgtctggaattttgtctggagccggttcttggatgg
gaactggatgcggcagaagcaggtatgcaaatagcgcaagatttagaacagcattgtgct
cctgtaccagatttgctggcagcattaatcgccacagtagagcgcttggttgctactgat
gaagaaagtgcatcagaacgtttgtggcgtggtgaggaaggcaatctgcttgccagccaa
ttaacagaattaatgttggcatcagaggttttgccgcctcaacctcctgttgttttagat
ggtctgttaacagcggttctggctcctgaacgcgttgctatgcgccgaggtggagatcca
aaatctttacatccacgtgttcttatctggggtttgtttgaatcgcgcctgcaaacggca
gaaacagttattttgggtggcctttccgaaggtgtatggccgcccgtagtggatgctggc
ccgtggatgagccgccctatgcgacaaagaatggggcttccatctccagagcaagctgtc
ggacaggcggcccatgatttttttgcaagcgcagctgccgcaggtacagttattctttcc
agcgcacgacgcagagaaggagcgcctgttgtgccggccagatggcttacacggctggat
gctttcttggctggccgtaaggggcatattcctaatcatccagctttgctttggttgaat
aagttggatcagccagtagggccagcaatacctgttgcaccgccgcagcctatgccaccc
gttgcactgcggcctcgtcgtttaagtgtgacagaaatagaaacctggataagagatcca
tacgctatttacgcaaaacacattttacgtcttgaagtcttgcctgagttggaagaagcc
gcagatgcatccgattacgggatgattgtgcataaagcgttagagcgttgggtgaaagcg
tatggtgtgacatggcctgataatgcagaaaagaaattatgcgatttattttctgcaagt
ttacaggaacatgttttgcgtccagcactgcgtgcatggtgggcccctaggttaacgcgt
attgcccagtgggttgtgcaggctgaagaaaagcggcggaacgaacacggtgtgccacgc
gctattcttacagaaattcgtgggcgtgtaagcattatggatgccccgggcggtaagttt
gacattgttggccgagcagatcgtatagaattaaatgctgatgggcacgtgattgtgcag
gattacaaaactggcacgttaccatctgccaaagatgttttggccggttggagcccgcag
ctaccgcttgaggctgctatgattattcggggtggttttaaggaagttcctgagcattca
agagaaatatcagatcttatttattggcgtctaactggtggtgcagagccgggagaagag
gttgttgtcaaaacccgtgaagcactcagccttacagacctggccgaacaaacttgggaa
aatttgctattgcggatagcagcatacgatcaaccagatcagccttacctttctcaccct
catccgggtagagaaccacgctttgccgattatgcacgtctggcacgtgtgcccgagtgg
aattcggcccgcaaggaggatgaggaatga
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integrated database retrieval system
