Acetobacter pasteurianus 386B: APA386B_1P221
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Entry
APA386B_1P221 CDS
T02786
Symbol
uvrD
Name
(GenBank) ATP-dependent DNA helicase protein
KO
K03657
ATP-dependent DNA helicase UvrD/PcrA [EC:
5.6.2.4
]
Organism
apk
Acetobacter pasteurianus 386B
Pathway
apk03420
Nucleotide excision repair
apk03430
Mismatch repair
Brite
KEGG Orthology (KO) [BR:
apk00001
]
09120 Genetic Information Processing
09124 Replication and repair
03420 Nucleotide excision repair
APA386B_1P221 (uvrD)
03430 Mismatch repair
APA386B_1P221 (uvrD)
09180 Brite Hierarchies
09182 Protein families: genetic information processing
03400 DNA repair and recombination proteins [BR:
apk03400
]
APA386B_1P221 (uvrD)
Enzymes [BR:
apk01000
]
5. Isomerases
5.6 Isomerases altering macromolecular conformation
5.6.2 Enzymes altering nucleic acid conformation
5.6.2.4 DNA 3'-5' helicase
APA386B_1P221 (uvrD)
DNA repair and recombination proteins [BR:
apk03400
]
Prokaryotic type
SSBR (single strand breaks repair)
NER (nucleotide excision repair)
GGR (global genome repair) factors
APA386B_1P221 (uvrD)
MMR (mismatch excision repair)
Other MMR factors
APA386B_1P221 (uvrD)
BRITE hierarchy
SSDB
Ortholog
Paralog
Gene cluster
GFIT
Motif
Pfam:
UvrD-helicase
UvrD_C
AAA_19
UvrD_C_2
Viral_helicase1
AAA_30
AAA_11
AAA_12
HHH
RecR_HhH
Motif
Other DBs
NCBI-ProteinID:
CCT60994
LinkDB
All DBs
Position
Apa386Bp1:184851..186953
Genome browser
AA seq
700 aa
AA seq
DB search
MSSKDFHTPGGHNYLSRLNDAQRQAVTHGIGFSPGQAVSSPLLVIAGAGSGKTNTLAHRV
AHLIASGADPRRILLLTFSRRASVEMMRRVERICKTVLGDKAAPLADALAWTGTFHAIGA
RLLREYAQQIGMDPAFSIHDREDSADLMNLIRHDLGFSKTEARFPGKGTCLAIYSRVVNS
GASLADVLLKHYPWCAVWEAQLKLLFASYVTAKQEQGVLDYDDLLLCWAQMMSDPLLAAD
IGSKWDHVLVDEYQDTNRLQAKILLGMKPDGRGLTVVGDDAQSIYAFRAATVRNILDFPA
SFDPPARVVTLDRNYRSTKPILDAANAVIGEAAERFTKDLWTERISEEKPRLVTIWDDTA
QANYIADRVLEERESGTPMKQQAVLFRASHHSGTLEVELTRRNIPFVKFGGLKFLDSAHV
KDVLALLRFAQNPRDRIAGFRVLQLLPGVGPTSARRVLDIMGEKAYPFEALKEVKAPQRS
GEAWSGFVNLLTALGSQQVGWPGEIAAVRYWYEPHLERLHEDASTRLADLVQLEQIASGY
PSREKFLTELTLDPPDATSDQAGVPLLDEDYLILSTIHSAKGQEWKNVFIMNAVDGCIPS
DLATGEKDDIEEERRLLYVAMTRAKDSLDIMVPQRFYAHGQHSRGDRHVYASRTRFIDKD
MLSLFEAVSWPVVNPEEQTRQDAVKSVRIDMAARLRDMWS
NT seq
2103 nt
NT seq
+upstream
nt +downstream
nt
ttgagttcaaaggattttcatacaccaggcggtcataattacttgtctcgtctgaatgat
gcgcagcggcaggcggtcacgcacgggatcggtttctcgccaggtcaagcggtttcatct
ccgttgctggtcattgccggtgccggctctggcaaaaccaacacgctggcgcaccgggtg
gcgcatctgatcgcatcgggcgcggatccgcgccggatcctgctgttgaccttttcccgg
cgggccagtgtggagatgatgagacgggtagagcgtatctgcaaaacggtacttggcgac
aaggctgctccgttggccgatgcgctggcctggaccggaacgtttcatgcaattggtgcg
cggctcttgagggaatatgcccaacagattggcatggatccggccttttcgatccatgac
cgggaggattccgccgatctgatgaatctgatccggcatgatctgggattttccaaaacc
gaagcgcgttttcccggtaaggggacatgtcttgccatctattcccgcgttgtaaattct
ggtgcgtcgctcgctgatgtgctgctgaaacattatccgtggtgcgcggtctgggaagct
cagctcaaactgctcttcgccagttatgtcacagccaagcaggaacagggggttctggat
tatgatgacctgctgctgtgctgggcacagatgatgagtgatccgttactggctgctgat
attggcagcaaatgggatcatgttctggttgacgaatatcaggacacaaatcgactgcag
gcaaagatccttctgggcatgaagccggatgggcgcgggctgactgtggtgggtgatgac
gcgcagagcatttacgccttccgggctgcgactgtgcgcaacattcttgattttccggca
tccttcgatcccccggcacgtgtggtgacgctggataggaactatcgttcaacaaaaccc
attctggatgcggccaacgcggtgattggcgaggcagctgagaggttcaccaaggatcta
tggaccgagcggatctcagaggaaaaaccacgactagttacaatctgggacgatacagcc
caagcgaactatattgcagatcgggtgctggaagagcgtgagtcgggcacgccgatgaag
cagcaggccgtgctgttccgggcttcacatcacagtggcacgctggaggtggaactgacc
cggcgcaacatcccgtttgtgaagtttggtggcctgaaatttctcgacagtgcgcatgta
aaggatgtgctagccctgctgcgttttgcgcagaatccgcgcgatcgtattgccggattc
cgggtgttacagcttctgcctggggtaggaccaacctcggcccggcgcgtgctggatatc
atgggcgagaaagcttatccctttgaggcactgaaggaagtgaaagccccgcagcgtagt
ggcgaggcctggtcgggttttgtgaaccttctgacagctcttggcagtcagcaggtcggt
tggcccggcgaaatcgcagctgtaagatactggtacgagccgcatctggagcgactgcat
gaggatgcctccacccgtttggccgatctggtgcaactggagcagatcgccagtggttat
ccctcacgggagaaatttctgaccgaactgacgctggatccgccggatgccacgtccgat
caggctggtgtgccgctgctggatgaggattatctgatcctctcgactattcattccgcc
aaggggcaggaatggaagaatgtcttcatcatgaatgccgtcgatggctgcattccgtct
gacctggcaacaggtgagaaggatgacatcgaggaggaacgtcgtctgctctatgtcgcg
atgacgcgagcgaaggactcactcgatatcatggtaccgcagcgcttttatgcgcatggc
cagcatagccggggcgaccggcatgtctatgcgtcgcgcactcgttttatcgacaaagac
atgctgtccctgtttgaggctgtatcctggcccgttgtgaacccagaggaacagacccgg
caggacgcggtgaagtctgtgcggattgatatggcagcccgcctgcgcgacatgtggtcg
taa
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