Acetobacter pasteurianus 386B: APA386B_2261
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Entry
APA386B_2261 CDS
T02786
Symbol
topA
Name
(GenBank) DNA topoisomerase I
KO
K03168
DNA topoisomerase I [EC:
5.6.2.1
]
Organism
apk
Acetobacter pasteurianus 386B
Brite
KEGG Orthology (KO) [BR:
apk00001
]
09180 Brite Hierarchies
09182 Protein families: genetic information processing
03032 DNA replication proteins [BR:
apk03032
]
APA386B_2261 (topA)
03400 DNA repair and recombination proteins [BR:
apk03400
]
APA386B_2261 (topA)
Enzymes [BR:
apk01000
]
5. Isomerases
5.6 Isomerases altering macromolecular conformation
5.6.2 Enzymes altering nucleic acid conformation
5.6.2.1 DNA topoisomerase
APA386B_2261 (topA)
DNA replication proteins [BR:
apk03032
]
Prokaryotic type
DNA Topoisomerases
APA386B_2261 (topA)
DNA repair and recombination proteins [BR:
apk03400
]
Prokaryotic type
DSBR (double strand breaks repair)
NHEJ (non-homologous end-joining)
SHIIR (short-homology-independent illegitimate recombination)
Facilitator
APA386B_2261 (topA)
BRITE hierarchy
SSDB
Ortholog
Paralog
Gene cluster
GFIT
Motif
Pfam:
Topoisom_bac
Toprim_C_rpt
Toprim
Zn_ribbon_Top1
Motif
Other DBs
NCBI-ProteinID:
CCT60303
LinkDB
All DBs
Position
complement(2323229..2325922)
Genome browser
AA seq
897 aa
AA seq
DB search
MTDVVVVESPAKAKTINKYLGDGYTVLASFGHVRDLPPKDGSVLPDEDFAMKWQSDERGM
KQVAAIAKALKGAHRLYLATDPDREGEAISWHVRAMLEERKALKGVDVQRVTFNEITKSA
IRYAMEHPRDLDFPLIEAYLARRALDYLVGFTLSPVLWRKLPGSRSAGRVQSVALRLICE
REAEIEVFKPREYWSVIASLLTPAGAAFTARLTHLNGKKLDQFDLHNAELAEAAKKAVEA
ENLAVKSIERRKVRRNPQPPFTTSTLQQEASRKLGMSAQTTMRTAQQLYEGMDLGGETVG
LITYMRTDGVTMAQEAINAIRQHIGQKIGTEYVPAKPRIYTSKVKNAQEAHEAVRPTDVS
RTPESVARFLNNDQRRLYELVWKRAVASQMESASLDQVAVDIAGPSGQTVLRANGSIITF
EGFLKLYREGRDDTEKAADDDARMLPSMQEKDPLKREKVDAEQHFTQPPPRYSEASLVKK
MEELGIGRPSTYASILTVLQDRSYVRLENRRFIPEARGRLVTAFLVSFFERYVDTGFTAS
LEELLDDISGGRAQWKQVLAAFWNDFSKAVSGTKELTITDVLNALDKDLGPFFFPERADG
SDPRVCPSCGTGRLGLKLGRYGAFIGCSNYPECQYTRRLTSDSAEEGDDAALKDGMRLLG
QNPETGEDITVRQGPWGLYVQQGEPNPEDKKAKPKRASLPKNINGESITLDQALGLLSLP
RLVGIHPETGEPIQAGLGRFGPFVKMGAVYGSLDKDDDVLTIGLNRAVDALAKKLASIRN
LGVHPKDGEPVMVRKGRFGPYVQHGQMVATLPRGTDMDAVTLDEAVALLADKGKPLKAKA
GAKKKATTTKTAAKKKTATKSTAKADAEGAEKAAPKKKAPAKKKATTTTRKKKAETE
NT seq
2694 nt
NT seq
+upstream
nt +downstream
nt
atgactgacgttgttgtggtcgaatcgcccgcaaaggcaaaaacgatcaacaaatatctg
ggtgatggctacacggtgctggcctccttcgggcatgtgcgcgatctgccacccaaggat
ggctccgtgctgccggatgaagactttgccatgaagtggcagtctgatgaacggggcatg
aagcaggttgctgccattgccaaagcgcttaaaggtgcccaccgactgtacctggccact
gacccggaccgtgagggtgaagccatttcgtggcatgtgcgcgccatgctggaagaacgc
aaagccctgaaaggggtggatgttcagcgcgttacgtttaacgaaattaccaaatccgcc
atccgctacgccatggagcacccgcgggatctggatttcccgctgattgaggcctatctg
gcccgccgggcgctggattatctggtgggctttacgctttcccccgtgttgtggcgcaag
ctgccggggtctcgcagtgcggggcgtgtgcaatctgtggcgctgcgtctgatttgtgag
cgcgaagccgagattgaggtttttaaaccgcgggaatactggagcgtcattgcatcgctg
ctcacccccgcaggtgccgcctttaccgcacggctgactcatctgaacggcaaaaagctg
gatcagtttgatctgcacaatgcggaactggccgaggccgccaaaaaagcggtggaagct
gaaaaccttgccgtaaaatctatcgaacgccgcaaggttcgccgtaacccgcagcctccg
ttcaccacctccaccttgcagcaggaagcctcccgcaagttgggcatgagcgcgcaaacc
accatgcgcaccgcccagcagctttatgaagggatggatctgggcggtgaaaccgtaggt
ttgatcacctatatgcgtaccgatggcgtgacgatggcgcaggaagccatcaacgccatt
cgccagcatatcggccagaaaattggcacggaatacgtgcctgccaagccacgtatctat
acctccaaggtcaagaacgcgcaggaagcgcatgaggctgtgcgccccaccgatgtgtcc
cgcacgcccgaatccgttgcccggttcctgaataatgaccagcgccggttgtacgaactg
gtatggaagcgtgctgttgccagccagatggaatccgcatctctggatcaggtagcggta
gatattgcaggcccctccggccagaccgtactgcgtgccaatggctccatcatcacgttt
gagggctttctcaagctctaccgtgaagggcgcgatgatacggaaaaagcagcggatgat
gatgcccgtatgctgcccagcatgcaggaaaaagatccgctcaagcgcgaaaaggtggat
gccgaacagcacttcacccagccgccgccgcgttattccgaagcatcgctggtgaaaaaa
atggaagagctgggcattggccgcccctctacctacgcttccattctaaccgtgttgcag
gaccgcagctatgtgcggctagaaaaccgccgctttattcccgaagcacgtgggcggctg
gtcacggccttccttgtctcgttctttgagcggtatgtggatacgggctttactgccagc
cttgaagaactgctggatgatatttccggtggccgtgcgcagtggaaacaggttctagcc
gcgttctggaacgatttttccaaggccgtatccggcaccaaggaactcaccattaccgat
gtgctcaatgcactcgataaggacctggggccgttcttcttccccgaacgtgctgatgga
tcagaccctcgggtttgcccctcctgcggtacaggccgccttgggctgaagctgggccgt
tatggcgcatttattggctgttccaactacccggaatgccagtacacccgccgcttaacg
tctgacagcgcggaagaaggtgatgatgccgcccttaaagacggcatgcgccttttgggc
cagaacccggaaacgggtgaggatattaccgtgcgccaaggcccgtggggcctatatgtg
cagcagggtgaacccaacccggaagacaaaaaagccaagcccaaacgcgcctccctgccc
aaaaatatcaatggggaaagcattacgctggatcaggctcttggcctgctctccctgcca
cgccttgtgggtattcaccccgaaacgggtgagcccattcaggccgggcttgggcgcttt
gggccgtttgtaaaaatgggcgcggtgtatggttcgctggacaaggacgatgatgttctg
accatcggcctcaaccgtgctgtggatgcgttggctaaaaagctggcttccatccgcaat
ctgggtgtgcaccccaaggatggtgaaccggttatggtgcgcaagggccgttttggcccg
tatgtgcagcatgggcagatggtggccaccctgccgcgcggtacggatatggatgccgta
acgctggatgaggccgtggctttgctggcagataagggcaaacccctaaaagccaaggct
ggcgccaaaaagaaagccaccaccaccaaaacggcggccaaaaagaaaactgcaaccaaa
agcacagccaaggctgatgcagagggtgcggaaaaagcggctcccaagaaaaaggcgccc
gctaaaaagaaggccaccaccacaacacgcaagaaaaaagccgagaccgagtaa
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