Actinobacillus pleuropneumoniae L20 (serotype 5b): APL_0176
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Entry
APL_0176 CDS
T00476
Symbol
pcnB
Name
(GenBank) putative poly(A) polymerase
KO
K00970
poly(A) polymerase [EC:
2.7.7.19
]
Organism
apl
Actinobacillus pleuropneumoniae L20 (serotype 5b)
Pathway
apl03018
RNA degradation
Brite
KEGG Orthology (KO) [BR:
apl00001
]
09120 Genetic Information Processing
09123 Folding, sorting and degradation
03018 RNA degradation
APL_0176 (pcnB)
09180 Brite Hierarchies
09182 Protein families: genetic information processing
03019 Messenger RNA biogenesis [BR:
apl03019
]
APL_0176 (pcnB)
Enzymes [BR:
apl01000
]
2. Transferases
2.7 Transferring phosphorus-containing groups
2.7.7 Nucleotidyltransferases
2.7.7.19 polynucleotide adenylyltransferase
APL_0176 (pcnB)
Messenger RNA biogenesis [BR:
apl03019
]
Prokaryotic type
Bacterial mRNA degradation factors
Other RNA degradation factors
Others
APL_0176 (pcnB)
BRITE hierarchy
SSDB
Ortholog
Paralog
Gene cluster
GFIT
Motif
Pfam:
PolyA_pol
PolyA_pol_arg_C
PolyA_pol_RNAbd
DUF2204
Motif
Other DBs
NCBI-ProteinID:
ABN73284
UniProt:
A3MYP8
LinkDB
All DBs
Position
194179..195711
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AA seq
510 aa
AA seq
DB search
MFSRQKKSKKQPLTEQETLSAKQERKVKAVELQPKSKRPAPAFNEQSERSTKKPKKHSDL
PSHLLHKKFTVNAGHYDITPKDFPKNALAIVEKLQRAGFEAYVVGGCIRDLLLGHKPKDF
DVATNAKPEEIQKIFGRQCRLIGRRFRLAHIVFGRDIYEVATFRADHASHNSDKISKVSE
EGMLLRDNVYGTLREDAQRRDFSVNSLYYDPKHNLIFDFFDGIADLKAGKLRLIGDPVVR
YQEDPVRMLRAVRFMAKLDMFLDKPSDTPIRELAHLLKNIPAARLFDESLKLFQSGQGFK
TYQLMRQYGLFEQLFPVLTPFFTERNDSNAERMLSKALNSTDDRIRDNLRVNPAFLFAAL
LWYPLREKMEVLKNEGGLNSHDAMMLAANDVLAESCKAIALHRRHTSVIRDIWALQFQMT
KRSGKRPQQTLEHVKFRAGFDLLVMRAEIEGGDLVELSAWWHEYQFSNDAQRAEMLKAVR
NVPNFAGEEKKKRRRKTFRKKKPAKKASAE
NT seq
1533 nt
NT seq
+upstream
nt +downstream
nt
ttgttttctcgacaaaaaaaatcaaaaaaacaaccgcttaccgaacaagaaacgcttagt
gctaagcaagaaagaaaagttaaagcggtagaattacaacctaaatccaagcgtcccgct
ccggcttttaacgaacagtcggaacgttctacgaagaaaccgaaaaagcactcggatctt
ccttcccatttattgcacaaaaaatttacagtaaatgccggacattatgatattacgccg
aaagatttccctaaaaatgcgttagcgattgttgaaaaattacaacgtgccggttttgaa
gcttatgtggtcggcggctgtattcgagatttattgctagggcataagccgaaagatttt
gatgttgcgaccaatgcaaaaccggaagaaattcaaaaaatattcggtcgtcaatgccgt
ttaatcggacgtcgttttcgtttggcacatatcgtattcggacgtgatatttatgaagtg
gcgactttccgtgccgatcacgccagccataatagcgataagatttctaaagtaagcgaa
gaaggaatgttgttgcgcgataatgtgtacggtaccttacgcgaagatgcgcaacgacgt
gattttagcgtgaattcgctctattatgatccgaaacataacttgattttcgacttcttc
gacggtattgcggatctgaaagcgggaaaactgcgtttaatcggtgatccggtggtgcgc
tatcaagaagatccggtacgaatgttacgcgcggttcgttttatggcaaaattggatatg
tttttggataaaccgagcgatacgccgattcgtgaattggcgcatttattgaaaaacatt
ccggcggcgcgtttatttgacgaatcgttgaaattatttcaatcgggacaaggttttaaa
acctatcaattaatgcgtcaatacggcttattcgagcagttatttccggtacttacgccg
ttttttaccgaacgtaacgattcgaatgcggagcgtatgttaagtaaagcgctgaattcg
accgatgatcgtattcgtgataatttacgggtgaatccggcgtttttattcgccgctctt
ctttggtatccgttacgtgagaaaatggaagtgctgaaaaacgaaggcggtttaaatagt
catgatgcgatgatgctggcggcgaatgacgtgttagccgaaagttgtaaagcgattgca
ttacatcgccgtcatacctctgtgattcgtgatatttgggcgttacagttccaaatgacc
aaacgttcgggcaaacgtccgcaacagaccttagaacacgtaaaattccgtgcgggtttc
gatttgttagtgatgcgtgccgagattgaaggcggcgatttagtcgagctttccgcttgg
tggcacgaatatcaattcagtaatgacgcacaacgtgcggaaatgctaaaagcggtcaga
aatgtgccgaattttgcaggcgaagaaaagaaaaaacgtcgccgtaaaacatttagaaag
aaaaagccggcgaagaaagcctcggctgaataa
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