Actinobacillus pleuropneumoniae L20 (serotype 5b): APL_0312
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Entry
APL_0312 CDS
T00476
Symbol
rumA
Name
(GenBank) 23S rRNA (uracil-5-)-methyltransferase RumA
KO
K03215
23S rRNA (uracil1939-C5)-methyltransferase [EC:
2.1.1.190
]
Organism
apl
Actinobacillus pleuropneumoniae L20 (serotype 5b)
Brite
KEGG Orthology (KO) [BR:
apl00001
]
09180 Brite Hierarchies
09182 Protein families: genetic information processing
03009 Ribosome biogenesis [BR:
apl03009
]
APL_0312 (rumA)
Enzymes [BR:
apl01000
]
2. Transferases
2.1 Transferring one-carbon groups
2.1.1 Methyltransferases
2.1.1.190 23S rRNA (uracil1939-C5)-methyltransferase
APL_0312 (rumA)
Ribosome biogenesis [BR:
apl03009
]
Prokaryotic type
rRNA modification factors
23S rRNA modification factors
APL_0312 (rumA)
BRITE hierarchy
SSDB
Ortholog
Paralog
Gene cluster
GFIT
Motif
Pfam:
tRNA_U5-meth_tr
Methyltransf_31
TRAM
Methyltransf_25
PCMT
Methyltransf_11
Cons_hypoth95
RrnaAD
Methyltransf_4
MTS
TRM5-TYW2_MTfase
DOT1
Methyltransf_23
Methyltransf_12
Ubie_methyltran
Methyltransf_15
Motif
Other DBs
NCBI-ProteinID:
ABN73416
UniProt:
A3MZ30
LinkDB
All DBs
Position
complement(346529..347857)
Genome browser
AA seq
442 aa
AA seq
DB search
MALFYSEKAAKQQAKKSAKTTACPPVTIQSLDYQGLGVAKINGKTWFIENALPNEQVEIQ
VLEEKRQYGRAKAVKILKQSAARQQPSCALYGKCGGSQMQHIPLDLQREAKQQALFQRLQ
KLQSQPIDFQPMIIGNDKGYRRRAKLSIASQNNQLAIGFRMQNSNQIIPLEQCEVLVEPL
SQLIKPLQSLFSTWQNKKSLGHIELVQADDTITMLIRNVGQFHPQDSRNLQQFAERHSLS
LYVMTAENDITHLSGEAPYYQIHGVKLGFSIRDFIQVNGDLNEKMVDKALEWLDLSAQDR
VLDLFCGMGNFTLPIAKQAGFVVGVEGVEPMVAQAKQNRDTSGLKNVAFYQTNLDEPFAD
KPWASEPFNKVLLDPARNGAFFCLDHLAALNPGTIVYVSCNPATLVRDAEKLIQAGYKLQ
KAAMIDMFPHTGHLESISLFTK
NT seq
1329 nt
NT seq
+upstream
nt +downstream
nt
atggcactgttctactctgaaaaagctgcaaaacagcaagcaaaaaaatcggcaaaaacg
accgcttgtccgccagttaccattcaatctttggattaccaaggtttaggcgtggcgaaa
attaacggtaaaacgtggtttatcgaaaatgccttacctaacgaacaagttgaaatccaa
gtgttggaagaaaaacgccaatacggacgagcaaaagcggttaaaattttaaagcaatcc
gccgcacgccaacagccgagttgtgctctctacggcaaatgcggcggcagccaaatgcag
catattccgctggatttacagcgtgaagccaaacaacaggcactttttcaacgcttacaa
aaactgcaatcacagccgattgattttcaaccgatgatcatcggtaacgataaaggctat
cgccgccgagcaaaactcagtattgcgtcacaaaataatcagttagcgattggttttaga
atgcaaaattcaaaccaaatcataccgcttgagcagtgtgaggtattagtcgagccgctt
tctcagcttatcaaaccattgcaaagcctatttagcacatggcagaacaaaaaatcactg
ggacatattgaactggttcaagcggatgataccattacgatgttgatacgtaacgtagga
caattccatccgcaagacagccgaaacttgcaacaatttgccgaacggcattcactttca
ttgtatgtgatgaccgctgaaaatgacattactcacttaagcggtgaagcgccgtattat
caaattcacggcgttaaactgggcttttcgattcgtgatttcattcaagtaaacggcgac
ttaaatgaaaagatggtagataaagcgttggaatggcttgatctttccgcacaagatcga
gtactggatttattctgcggtatgggaaacttcactttgccgattgccaagcaagccggc
tttgttgtgggggtggaaggcgttgagccgatggttgcacaagctaagcagaatcgtgat
acaagcggtctaaaaaacgtagcattttaccaaaccaacctagacgaaccttttgccgat
aaaccttgggcaagtgaaccgtttaacaaagttttattagatccggcgcgtaacggcgca
tttttctgtttagatcatttagccgcattgaatcccggaacgatcgtttatgtttcttgt
aatcccgctaccttagtccgagatgcagaaaaactgattcaagctggttataaactgcaa
aaagcggcaatgatcgatatgttcccacataccggacatttggaatctatttcgttattt
actaaataa
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