Actinobacillus pleuropneumoniae L20 (serotype 5b): APL_0616
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Entry
APL_0616 CDS
T00476
Symbol
rnd
Name
(GenBank) ribonuclease D
KO
K03684
ribonuclease D [EC:
3.1.13.5
]
Organism
apl
Actinobacillus pleuropneumoniae L20 (serotype 5b)
Brite
KEGG Orthology (KO) [BR:
apl00001
]
09180 Brite Hierarchies
09182 Protein families: genetic information processing
03016 Transfer RNA biogenesis [BR:
apl03016
]
APL_0616 (rnd)
Enzymes [BR:
apl01000
]
3. Hydrolases
3.1 Acting on ester bonds
3.1.13 Exoribonucleases producing 5'-phosphomonoesters
3.1.13.5 ribonuclease D
APL_0616 (rnd)
Transfer RNA biogenesis [BR:
apl03016
]
Prokaryotic type
3'processing and CCA adding factors
3'processing factors
APL_0616 (rnd)
BRITE hierarchy
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Ortholog
Paralog
Gene cluster
GFIT
Motif
Pfam:
DNA_pol_A_exo1
RNAseD_HRDC_C
HRDC
RsdA_SigD_bd
Motif
Other DBs
NCBI-ProteinID:
ABN73718
UniProt:
A3MZY2
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All DBs
Position
702230..703345
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AA seq
371 aa
AA seq
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MNQIIHYHWIDTDEKLKTVCENACRKSAVALDTEFIRTRSYYPKLGLIQLFDGDTVSLID
PNSISDFSPFIGLLTCQNVVKVLHACSEDLEVFQHLFKQLPTPLADTQIMAGFAGGGISL
GFAKLVAHYLNVELDKGASRTDWLARPLTEEQLQYAAADVWYLLPVYQRLVSDLDATRWQ
NAVEQECRYLLSKRESVANIAQAYKDISNAWRLEPQQLAILKVLAKWRIEEAEKRDLALN
FVVKENCLFEIAKLQPKHTSQLLGFMHPNEVRIHGKKLLMLVEQGLAVLPENYPEKIIRL
VDQANYKYKLKAMQQKLAEIQPPDLAPELLASKRQLNQLFSWHQQGQNEDKLPELLSGWR
REFGLQILSVL
NT seq
1116 nt
NT seq
+upstream
nt +downstream
nt
atgaatcaaatcattcactatcattggattgatacggacgaaaaattaaaaacggtttgc
gagaacgcttgtcggaaatcggcagtggcattggataccgaatttattcgaacccgttcg
tattatccgaaacttggtcttattcagctttttgacggcgataccgtcagtttgattgat
cctaattcaatctccgatttctctccgtttatcggtttattgacgtgtcaaaacgtcgta
aaagtattacacgcttgcagtgaagatttagaggttttccagcaccttttcaaacagttg
cctacacctttggctgatacgcaaatcatggcaggatttgcagggggcggcatttcgcta
ggttttgctaaacttgtcgcgcattatttaaatgtcgagctggataaaggcgcctccaga
acggactggctcgcacgaccattaacggaagaacaattacaatacgcggcggcggatgta
tggtatttgttaccggtttatcaacgcttggtttcggatctggatgcgacacgttggcaa
aatgccgttgaacaggaatgtcgatatttattaagtaaaagagaatccgtcgcaaatatt
gctcaagcgtataaagatatttcaaacgcatggcgtttagaacctcagcaactggctata
ttaaaagtactggcgaaatggcgaatagaagaagcggaaaaacgagatttagcattaaat
ttcgtcgtgaaagaaaattgtttatttgaaatagctaaattgcaaccgaaacatacttcg
caattattgggatttatgcatccgaacgaagtacgtattcatggtaaaaaattgttaatg
ctcgttgaacaggggttagccgtattaccggaaaactatcctgaaaaaattatacgttta
gtagatcaggcaaactataaatataaattgaaggcgatgcagcaaaaattagcggaaatt
caaccgcctgatttagcacccgagttattagccagtaaacggcaattaaatcaacttttc
agttggcatcaacaagggcaaaatgaggataaactaccggaactactgagcggatggcgt
cgagagttcggtttacaaattctttcggttttgtaa
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