Actinobacillus pleuropneumoniae L20 (serotype 5b): APL_0641
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Entry
APL_0641 CDS
T00476
Symbol
truB
Name
(GenBank) tRNA pseudouridine synthase B
KO
K03177
tRNA pseudouridine55 synthase [EC:
5.4.99.25
]
Organism
apl
Actinobacillus pleuropneumoniae L20 (serotype 5b)
Brite
KEGG Orthology (KO) [BR:
apl00001
]
09180 Brite Hierarchies
09182 Protein families: genetic information processing
03016 Transfer RNA biogenesis [BR:
apl03016
]
APL_0641 (truB)
Enzymes [BR:
apl01000
]
5. Isomerases
5.4 Intramolecular transferases
5.4.99 Transferring other groups
5.4.99.25 tRNA pseudouridine55 synthase
APL_0641 (truB)
Transfer RNA biogenesis [BR:
apl03016
]
Eukaryotic type
tRNA modification factors
Psudouridine synthases
APL_0641 (truB)
Prokaryotic type
APL_0641 (truB)
BRITE hierarchy
SSDB
Ortholog
Paralog
Gene cluster
GFIT
Motif
Pfam:
TruB_N
TruB_C_2
TruB-C_2
Motif
Other DBs
NCBI-ProteinID:
ABN73743
UniProt:
A3N007
LinkDB
All DBs
Position
733330..734247
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AA seq
305 aa
AA seq
DB search
MSRPRKKGRDVHGVFLLDKPQGMSSNDILQKVKRLFQANKAGHTGALDPLATGMLPICLG
EATKFSQFLLDSDKRYQVTAKLGKRTDTSDAEGQVVETRAVNVGEAEIITALEQFRGDIL
QVPTMFSALKHNGKPLYEYARQGITVEREARPITIFELRFIEYAAPYLTLEVHCSKGTYI
RTLVDDLGEVLGCGAHVTVLRRLAVANYPIEAMMSYADLQNLSENQPLEELDKYLLPLDT
AVESLPKLNLTAEQTKAVGFGQRVKFENNDQIYGQVRLFSHNMQFLGVAEITTDNVIRPS
RMVNI
NT seq
918 nt
NT seq
+upstream
nt +downstream
nt
gtgtccagacctcgtaaaaaagggcgtgatgttcacggcgtatttttattagataaaccg
caaggaatgtcgtcaaacgatattttgcaaaaggttaaacgcctgtttcaagcgaataaa
gcggggcataccggcgcattagatccgcttgcgaccggaatgcttccgatttgtttaggc
gaagcgaccaagttttcacaatttttgcttgattcggacaaacgttatcaagttactgca
aaattaggcaaacgcaccgatacgtccgatgcggaaggtcaagtggtggaaacccgtgcg
gtgaacgtaggtgaagcggaaattattacggcattggagcaatttcgcggcgatatttta
caagtgccgactatgttttccgcattaaaacataacggtaaaccgctctatgaatatgct
cgccaaggcattacggtagaaagagaagctcgcccgattacgattttcgaattgcgtttt
atcgaatatgccgcaccttatcttacgttagaggtacattgctcgaaaggcacttatatt
cgtactttagtcgatgatttaggcgaagtattgggctgtggtgcgcacgtgacggttcta
cgccgtttagcggtggcaaattatccgattgaagcgatgatgagctatgcggatttgcaa
aatttaagtgaaaatcaaccgcttgaagaattagataaatatcttttacctttagatacc
gcagtagaaagcctaccaaaactaaacttaaccgcagagcagactaaagcggtcggtttc
ggtcaaagagtgaaatttgaaaataacgatcaaatttacggacaagttcgtttattttcg
cataatatgcaattcctcggtgtcgcggaaattacgaccgataatgtcattcgcccaagc
agaatggtaaatatttaa
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