Actinobacillus pleuropneumoniae L20 (serotype 5b): APL_1116
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Entry
APL_1116 CDS
T00476
Symbol
recQ
Name
(GenBank) ATP-dependent DNA helicase RecQ
KO
K03654
ATP-dependent DNA helicase RecQ [EC:
5.6.2.4
]
Organism
apl
Actinobacillus pleuropneumoniae L20 (serotype 5b)
Pathway
apl03018
RNA degradation
Brite
KEGG Orthology (KO) [BR:
apl00001
]
09120 Genetic Information Processing
09123 Folding, sorting and degradation
03018 RNA degradation
APL_1116 (recQ)
09180 Brite Hierarchies
09182 Protein families: genetic information processing
03019 Messenger RNA biogenesis [BR:
apl03019
]
APL_1116 (recQ)
03400 DNA repair and recombination proteins [BR:
apl03400
]
APL_1116 (recQ)
Enzymes [BR:
apl01000
]
5. Isomerases
5.6 Isomerases altering macromolecular conformation
5.6.2 Enzymes altering nucleic acid conformation
5.6.2.4 DNA 3'-5' helicase
APL_1116 (recQ)
Messenger RNA biogenesis [BR:
apl03019
]
Prokaryotic type
Bacterial mRNA degradation factors
RNA degradosome components
Helicases
APL_1116 (recQ)
DNA repair and recombination proteins [BR:
apl03400
]
Prokaryotic type
DSBR (double strand breaks repair)
NHEJ (non-homologous end-joining)
SHDIR (short-homology-dependent illegitimate recombination)
Supressor
APL_1116 (recQ)
BRITE hierarchy
SSDB
Ortholog
Paralog
Gene cluster
GFIT
Motif
Pfam:
RQC
DEAD
Helicase_C
HRDC
RecQ_Zn_bind
HEM4
ResIII
Helicase_Sgs1
SWI2_SNF2
Hanta_Gn-B
Motif
Other DBs
NCBI-ProteinID:
ABN74208
UniProt:
A3N1C2
LinkDB
All DBs
Position
complement(1292903..1294711)
Genome browser
AA seq
602 aa
AA seq
DB search
MQLSQTAAKDVLNNVFGYQSFRHGQQEVIDSVLAGRDCLVIMTTGGGKSLCYQVPALCLD
GITLVISPLISLMKDQVDQLLTNGIEAGFLNSTQTFEEQQLVEQKALSGQLKLLYLSPEK
VMTQGFFHFISLCKISLIAVDEAHCVSQWGHDFRPEYTLLGNLRDTFPNVPLMALTATAD
PTTRHDILQHLRLTDPHTYLGSFDRPNIRYTVQEKFKPVEQLAKFISKQQGKSGIVYCNS
RKKVEEITEKLASRKISVMGYHAGMSVQQRETVQNAFQRDNIQVVVATIAFGMGINKSNV
RFVVHFDLPRSIESYYQETGRAGRDDLPSEAVLFYDPADYAWLQKVLLEEPESEQRDIKQ
HKLQAIGAFAESQTCRRLVLLNYFGESRQEPCKNCDICLDPPRKYDGTLDAQKVMSVIYR
TGQTFGAHHVIGVLRGLNNQKIRQFNHDQLSVYGIGKEQSQDYWLSIIRQLIHLGLIRQN
IVNHSALQLTEEARPVLRSEKKLELAMPRLTFSATAYVQKQSSVRYDKDLFARLRFLRKQ
IADKENIPPYVVFNDATLQEMAEFLPLSEVEMLDINGVGERKLERFGGAFLSLIREHCNN
RQ
NT seq
1809 nt
NT seq
+upstream
nt +downstream
nt
atgcaattatctcaaaccgccgccaaagacgtattgaataatgtcttcggttatcaatct
tttcgtcacggacaacaagaagtgatcgattcggttctggcgggtagagattgtttagtc
attatgaccaccggcggcggtaagtcgctttgttaccaagtaccggcgctttgcttagac
ggcattacgctagtgatttctccgctgatttctttgatgaaagatcaggttgatcagttg
cttaccaatggtatcgaagccggctttttaaattccacgcaaacttttgaagaacaacag
cttgtcgaacagaaagcactttccggtcagttgaaattactttatctctcgccggaaaaa
gtaatgactcaaggctttttccattttatttcgttatgcaaaattagcctgattgcagtc
gatgaagcgcattgcgtttcgcaatgggggcatgatttccgtccggaatacactttatta
ggcaatttgcgtgatacctttccgaatgtgccgctgatggcattaacggcaacggcagat
cctacgactcgccacgatattctgcagcacctgcgcttaaccgatccgcatacctattta
ggcagttttgatcgcccgaatattcgctatacggtacaagaaaaatttaagccggtggaa
cagttggcaaaattcatcagtaaacagcagggcaagagcggtatcgtttattgcaatagc
cgtaaaaaagtggaagaaattaccgaaaaattggcgtcacgtaaaatttcagtaatgggt
taccacgccggtatgtcggttcagcaacgtgaaacggttcaaaatgcgtttcagcgagat
aatattcaagttgtggtggctactattgctttcgggatggggattaataaatcaaacgtg
cgttttgtggtgcatttcgatttgccacgcagtatcgaatcctactatcaagaaaccggg
cgtgccggacgtgatgatttaccatctgaagcggtgttattttatgatcccgccgattat
gcgtggttacagaaagtattattggaagagccggaaagcgaacagcgcgatataaagcaa
cataaattacaagccatcggtgcttttgccgaatcgcaaacctgccgccgtttagtgcta
ttgaattatttcggcgaatcacgccaagaaccctgtaaaaactgtgatatttgcttagat
ccgcctcggaaatatgacggtacgttagatgcgcaaaaagtgatgtcggttatttaccgt
accggtcaaacttttggcgcacaccatgtgattggcgtattacgagggttaaataaccaa
aaaattcgccagtttaatcatgatcagctttcggtgtacggtatcggtaaagagcagagc
caagattattggttaagtattattcgtcaattaattcatttgggtttaattcgtcaaaat
atcgtgaaccattcggcattacagctgacggaagaagctcgtccggtgctgcgttcggag
aaaaaacttgaattggcaatgcctcgcttaaccttctcggcaacggcttatgtacagaaa
cagagttcggttcgttacgataaagacttatttgctcgcctgcgttttctacgtaaacaa
attgccgataaagaaaatatcccgccttatgtggtattcaacgatgcgactttgcaggaa
atggcggaatttttaccgcttagcgaagtggaaatgttggatattaatggggtcggagaa
cgtaaactggaacgtttcggcggtgcgtttttaagcctgattcgagagcattgtaataat
cgccaataa
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