Actinobacillus pleuropneumoniae L20 (serotype 5b): APL_1326
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Entry
APL_1326 CDS
T00476
Symbol
uvrD
Name
(GenBank) DNA helicase II
KO
K03657
ATP-dependent DNA helicase UvrD/PcrA [EC:
5.6.2.4
]
Organism
apl
Actinobacillus pleuropneumoniae L20 (serotype 5b)
Pathway
apl03420
Nucleotide excision repair
apl03430
Mismatch repair
Brite
KEGG Orthology (KO) [BR:
apl00001
]
09120 Genetic Information Processing
09124 Replication and repair
03420 Nucleotide excision repair
APL_1326 (uvrD)
03430 Mismatch repair
APL_1326 (uvrD)
09180 Brite Hierarchies
09182 Protein families: genetic information processing
03400 DNA repair and recombination proteins [BR:
apl03400
]
APL_1326 (uvrD)
Enzymes [BR:
apl01000
]
5. Isomerases
5.6 Isomerases altering macromolecular conformation
5.6.2 Enzymes altering nucleic acid conformation
5.6.2.4 DNA 3'-5' helicase
APL_1326 (uvrD)
DNA repair and recombination proteins [BR:
apl03400
]
Prokaryotic type
SSBR (single strand breaks repair)
NER (nucleotide excision repair)
GGR (global genome repair) factors
APL_1326 (uvrD)
MMR (mismatch excision repair)
Other MMR factors
APL_1326 (uvrD)
BRITE hierarchy
SSDB
Ortholog
Paralog
Gene cluster
GFIT
Motif
Pfam:
UvrD-helicase
UvrD_C
AAA_19
PcrA_UvrD_tudor
UvrD_C_2
AAA_30
Viral_helicase1
AAA_12
Motif
Other DBs
NCBI-ProteinID:
ABN74410
UniProt:
A3N1X4
LinkDB
All DBs
Position
1519784..1521982
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AA seq
732 aa
AA seq
DB search
MDFSLLLDGLNDKQREAVAAPLGNYLVLAGAGSGKTRVLTHRIAWLIGVENVPESNILAV
TFTNKAAAEMRHRIEHTLSSSSHHRLFGMWVGTFHSIANRLLRSHYLDADLPQDFQIMDS
EDQQRLLKRLLKLHNIDEKHFPPKHVAWYISVQKDKGKRPKDIEHHNDPNEKKLVQIYQI
YQDACDRAGLLDFAELLIRAYELFRDKPPILQRYQQRFQQILIDEFQDTNNIQYDLIRLL
AGETGNVMIVGDDDQSIYGWRGAQVENIQRFLNDYQKAETIRLEQNYRSTGHILATANEL
ISNNEDRLGKNLWTDQGDGDPVEIYCAFNELDEARFVASQIKQWKEDEGDLNECAVLYRS
NSQSRVIEEALIQANIPYRIYGGMRFFERQEIKDALAYLRLIANRQDDAAFERVINTPPR
GIGERTLDTIRQITRNRQITLWQAIQVAVQEEQLSGRAASALLRFVELINALEQETEQMP
LFEQTDFVIKKSGLYEMYKQEKGEKGEVRIENLEELVTATKQFSKPDEAEEMSDLTAFLT
HASLEAGEAQASPHQDYVELMTLHSAKGLEFPRVFIVGVEEGIFPSGMSFDEGRLQEERR
LAYVGITRAKKKLTISYAELRRLYGKEERHIASRFIAELPEQHIREVRLRGSINRAASFA
QSTPFAKNSAKTTASCLEDNSWKMGQKVQHAKFGQGTIVNVEGSGEATRLQIAFAGNGIK
WLIAKMANLEKI
NT seq
2199 nt
NT seq
+upstream
nt +downstream
nt
atggatttttctttattattagacggtttaaatgataagcagcgagaggctgtcgctgcg
ccgttgggcaattatttagtattggcgggagccggttccggtaaaacacgggtgctgaca
catcgtattgcatggttaatcggtgtagaaaacgtaccggaatcgaatattctagcagtc
acctttaccaataaagcggcagcggaaatgcgtcatcgtatcgaacataccctttcttcc
agcagccatcaccgcctgttcggtatgtgggtcggtacgttccacagcattgccaaccgt
ttgttacgctcacattatcttgatgccgatttgccgcaagatttccaaattatggatagc
gaagatcagcaacgtttacttaaacgtttgttaaagctgcacaatattgatgaaaaacat
ttcccaccgaaacacgtggcgtggtatatcagtgtgcaaaaagataaaggtaaacgcccg
aaagatattgaacatcataacgatccgaacgagaagaaattagtccaaatctaccaaatt
tatcaagatgcctgcgatcgtgccggtctgttggattttgccgaattattgattcgcgct
tatgaacttttccgagacaaaccgccgattttacagcgctatcagcaacgttttcagcag
attttgatcgatgagttccaagataccaacaatattcaatatgacttaatccgtctgctt
gccggtgaaaccggtaatgtgatgattgtcggcgatgacgaccaatcgatttacggctgg
cgtggtgcgcaggttgaaaatattcagcgtttcttaaacgattatcaaaaagcggaaacc
attcgtcttgagcaaaattaccgctcaaccggtcatattctcgctacggcaaacgaattg
atttccaataacgaagaccgtttgggtaagaatttatggacggatcaaggcgacggcgat
ccggttgaaatttattgtgctttcaacgaattggacgaagcccgttttgttgcctcacaa
attaaacaatggaaagaggacgaaggcgatttaaatgaatgtgcggtgctatatcgtagt
aacagccaatctcgtgtgattgaagaagcattgattcaagcgaatattccttaccgtatt
tacggcggtatgcgcttcttcgaacgccaagaaatcaaagatgcgctggcgtatttacgt
ttgatcgctaatcgccaagacgatgcggcatttgaacgagtgattaacacaccgccaaga
ggaattggcgaacgcaccttagatacgattcgtcaaattactcgtaatcgccaaataacc
ttgtggcaagcgattcaagtggctgtgcaagaagaacagctttccggcagagccgcttcc
gccttactacgttttgtcgaattgattaatgcgctcgagcaagaaaccgagcaaatgcca
ctgtttgaacaaaccgattttgtgattaaaaaatccggtttgtacgaaatgtataaacaa
gaaaaaggggaaaaaggcgaagttcgtatcgagaacttagaagagctggttaccgccact
aaacaattcagcaagcctgacgaagcggaagaaatgtcggatctcaccgcatttttaact
cacgcttcattagaagccggcgaagcgcaagcctctccgcatcaagattatgtcgaatta
atgacgttacattcggcaaaaggcttagaattcccccgtgtatttatagtgggtgtggaa
gaaggcattttcccgagcggaatgagctttgacgaaggcagactgcaagaagagcgccgt
ttggcttatgtcggtattacccgtgcgaagaaaaaattgacgatcagttatgccgaactc
agacgtttatacggcaaagaagagcgtcatatcgcttctcgttttattgccgaattgccc
gagcagcatattcgcgaagtacgtttgagaggctctatcaatcgtgcggcaagttttgcc
caaagcacgccttttgcaaaaaattcggcaaaaacgaccgcttcttgtttagaagacaat
agctggaaaatggggcaaaaggtgcaacacgctaaattcggacaaggcacgattgttaat
gtggaaggcagcggcgaagcgacccgtttgcaaatcgcctttgcaggtaacggtattaag
tggttgattgctaagatggcaaatttagagaaaatttaa
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