Actinobacillus pleuropneumoniae L20 (serotype 5b): APL_1560
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Entry
APL_1560 CDS
T00476
Symbol
rsmB
Name
(GenBank) ribosomal RNA small subunit methyltransferase B
KO
K03500
16S rRNA (cytosine967-C5)-methyltransferase [EC:
2.1.1.176
]
Organism
apl
Actinobacillus pleuropneumoniae L20 (serotype 5b)
Brite
KEGG Orthology (KO) [BR:
apl00001
]
09180 Brite Hierarchies
09182 Protein families: genetic information processing
03009 Ribosome biogenesis [BR:
apl03009
]
APL_1560 (rsmB)
Enzymes [BR:
apl01000
]
2. Transferases
2.1 Transferring one-carbon groups
2.1.1 Methyltransferases
2.1.1.176 16S rRNA (cytosine967-C5)-methyltransferase
APL_1560 (rsmB)
Ribosome biogenesis [BR:
apl03009
]
Prokaryotic type
rRNA modification factors
16S rRNA modification factors
APL_1560 (rsmB)
SSDB
Ortholog
Paralog
GFIT
Motif
Pfam:
Methyltr_RsmB-F
NusB
RsmF-B_ferredox
Methyltransf_31
Methyltransf_25
FtsJ
Methyltransf_37
Methyltransf_5
Methyltransf_12
Methyltransf_11
Methyltransf_15
Methyltransf_33
Ubie_methyltran
POR
TRM5-TYW2_MTfase
adh_short
Motif
Other DBs
NCBI-ProteinID:
ABN74644
LinkDB
All DBs
Position
complement(1784135..1785433)
Genome browser
AA seq
432 aa
AA seq
DB search
MKKQNARAVAAQIILQVLDQGKSLATLIPEAQAKLEAKDLPLVQEITFGVCRTLPRLEAV
IAQAVEKPLKGKTRLVHCLLLVGLYQLLYMRVPEFAAVDEVVNAARSLKLDNFKALINGV
LRRFLREKDSLLAKFDKNWQTLHPEWFVNKLKKAYPNWREIIDANNQRPPMWIRSNIQRI
KPQDYRVLLGDLVAKNSENTTACVPESAILLANPVPVNKLMNFEQGWATVQDAHAQWSAA
LLEAQNGELILDACAAPGGKTTHILEAAPQAKVIALDIEESRLKRVRENLARLGQTATVI
CGDASKPAEWLDDGVMFDRILLDAPCSATGVIRRHPDIKWLRKENDIAELVALQAKILEA
LWGRLKPNGVLVYATCSVLPEENGEQITRFVASHSDAEWVEMDFNGEKTAMKQFFPQEQG
GDGFFYAKLIKQ
NT seq
1299 nt
NT seq
+upstream
nt +downstream
nt
atgaagaaacaaaacgcacgtgcggttgccgcacaaattattttacaagtgttggatcaa
ggtaaatcgcttgccactttgattcctgaagctcaggcaaaattagaggcgaaagactta
ccgctggtgcaagagattacctttggcgtgtgccgaaccttacctcgtcttgaagcggtc
atcgcacaagcggtggaaaaaccgttaaaaggcaaaactcgcttggtgcattgcttgtta
ttagttgggctttatcagttgctttatatgcgagtgccggaatttgcggcggttgatgaa
gtggtcaatgcggcaagatcgctaaaattggataattttaaagcacttatcaatggcgtg
ttacgccgttttttacgtgaaaaagattcgctgttagctaagtttgataaaaattggcaa
acgcttcaccccgaatggtttgtgaataaactgaaaaaagcctatccgaattggcgagaa
attatcgatgcgaacaatcaacgtccgccgatgtggattcgtagcaatattcagcggatt
aaaccgcaagattaccgtgtcttgttaggcgatctggttgcaaaaaattcggaaaatacg
accgcttgcgtgcctgaatcggcaattttattagccaatccggtaccggttaataaattg
atgaattttgaacaaggttgggcgacggtacaagatgctcacgctcagtggtcggcagct
ttgttggaagcacaaaacggcgaattaattttagacgcttgtgcagcaccgggcggcaaa
actacgcatattttggaagcggcaccgcaagcgaaggtaattgcgttagatattgaagaa
agccgtctaaaacgtgtacgtgagaatttagctcgtcttggacagacggcaacggtgatt
tgcggcgatgcgtctaaaccggcggaatggttggacgacggtgtgatgtttgaccgtatt
ttgctcgatgcgccttgttccgccaccggcgtaattcgccgtcatccggatattaaatgg
ttacgtaaagaaaacgatattgccgaattagtcgcgttacaggcgaaaattcttgaagca
ttatggggcagattaaaaccgaacggcgtattggtttatgcgacttgttcggttctaccg
gaagaaaacggcgagcagattacccgttttgtcgcaagccattcggatgccgaatgggta
gaaatggattttaacggcgaaaaaaccgcaatgaaacagtttttcccgcaagaacagggc
ggtgacggtttcttttatgcgaaattaatcaaacaataa
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