| Entry |
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| Symbol |
rpoC
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| Name |
(GenBank) DNA-directed RNA polymerase beta' chain
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| KO |
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| Organism |
apl Actinobacillus pleuropneumoniae L20 (serotype 5b)
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| Pathway |
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| Brite |
KEGG Orthology (KO) [BR:apl00001]
09120 Genetic Information Processing
09121 Transcription
03020 RNA polymerase
APL_1728 (rpoC)
09180 Brite Hierarchies
09182 Protein families: genetic information processing
03021 Transcription machinery [BR:apl03021]
APL_1728 (rpoC)
03400 DNA repair and recombination proteins [BR:apl03400]
APL_1728 (rpoC)
Enzymes [BR:apl01000]
2. Transferases
2.7 Transferring phosphorus-containing groups
2.7.7 Nucleotidyltransferases
2.7.7.6 DNA-directed RNA polymerase
APL_1728 (rpoC)
Transcription machinery [BR:apl03021]
Prokaryotic type
Bacterial type
RNA polymerase
Core subunits
APL_1728 (rpoC)
DNA repair and recombination proteins [BR:apl03400]
Prokaryotic type
SSBR (single strand breaks repair)
NER (nucleotide excision repair)
TCR (transcription coupled repair) factors
DNA-directed RNA polymerase complex (RNAP)
APL_1728 (rpoC)
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| SSDB |
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| Motif |
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| Other DBs |
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| LinkDB |
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| Position |
1961382..1965620
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| AA seq |
1412 aa
MKDLVKFLKAQSKSNDDFDVIKIGLASPDKIRSWSFGEVKKPETINYRTFKPERDGLFCA
RIFGPVKDYECLCGKYKRLRHRGVICEKCGVEVTQTKVRRDRMGHIELACPVAHIWFLKS
LPSRIGLILDMPLRDIERVLYFESYVVTEPGMTDLEKNQLLTEEQFLDAEERWGDEFEAK
MGAEGIQALLRDMDLEHQCEMMREELQETNSETKRKKITKRLKLLEAFQQSGNKPEWMVM
TVLPVLPPDLRPLVPLDGGRFATSDLNDLYRRVINRNNRLKRLLDLVAPDIIVRNEKRML
QESVDALLDNGRRGRAITGSNKRPLKSLADMIKGKQGRFRQNLLGKRVDYSGRSVITVGP
YLHLHQCGLPKKMALELFRPFIYSKLESRGIASTIKAAKKMVEREEPIVWDILAEVIREH
PILLNRAPTLHRLGIQAFEPILIEGKAIQLHPLVCAAFNADFDGDQMAVHVPLTLEAQLE
ARALMMSTNNVLSPASGDPIIVPSQDVVLGLYYMTREKVNAKGEGMYFLDPREAEKAYRT
GQAELHARVKVRITEHVKNEAGELVAETKLLDTTIGRAILWMIAPKGMPFKVFNQTLGKK
AISKLINESYRRLGLKESVILADQIMYTGFAYAARSGASVGIDDMVIPAQKHEIIRAAEA
EVAEIQEQFNSGLVTAGERYNKVIDIWAAANERVAKAMMENLSTEEVINREGNPEKQASF
NSIFMMADSGARGSAAQIRQLAGMRGLMARPDGSIIETPITANFREGLNVLQYFISTHGA
RKGLADTALKTANSGYLTRRLVDVAQDLVITEDDCGTHEGIVMTPLIEGGDVKEALRDRV
LGRVVAEDVLKPGTEEVLIPRNTLIDEKWCDVIDAESVDVIKVRSVVTCNTDFGVCAKCY
GRDLARGHLINQGEAVGVIAAQSIGEPGTQLTMRTFHIGGAASAAAKESSIQVKNAGTIK
LTNAKFVTNKEGKIVLTSRNTELTVIDTFGRTKENYKVPYGAVLSKNDGAEVAVGEVVAN
WDPHTMPVISEVSGRIQFSDIVDGLTVTRQTDELTGLSSIVVQDVGERATAGKDLRPALR
LVDAQGNDILIPSTDVAAQYFLPGKAIVTLDDGAEIEVGEALARIPQESVGTKDITGGLP
RVADLFEARKPKEPAILAEISGIVSFGKETKGKRRLVITPAEGEAFEEMIPKWRQLNVFE
GEMVQRGDVISDGAETPHDILRLRGVHAVTDYIVNEVQEVYRLQGVKINDKHIEVIVRQM
LRKAVITNAYDSEFLEGEQVEVSRVKIANRKRAEEGKPLVEFERELLGITKASLATESFI
SAASFQETTRVLTEAAVAGKRDELRGLKENVIVGRLIPAGTGFAYHQNRAKKRNQQEQAV
AFEAPVEKLTGSQPMLISKRNSNSLQTMQLKA |
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| NT seq |
4239 nt +upstreamnt +downstreamnt
gtgaaagacttagtaaagtttttaaaagcacaatcaaaatcgaatgatgattttgatgta
attaaaattggtttagcatcaccggataaaatccgttcttggtctttcggtgaagtaaaa
aaaccggaaacaattaactatcgtacctttaaacctgagcgtgacggtcttttctgtgca
cgtatcttcggaccggtaaaagattacgaatgtttatgcggtaaatataaacgtttaaga
caccgcggcgtaatctgcgaaaaatgtggtgttgaagttactcaaactaaagtacgtcgt
gaccgtatgggtcatattgaacttgcttgtccggtggcacacatttggttcttaaaatca
cttccgtcccgtatcggtttaattttagatatgccgttacgcgatattgaacgtgtactt
tacttcgaatcttatgtggttaccgaaccgggaatgaccgatttagaaaaaaatcagtta
ttaaccgaagaacagttcttagacgcagaagagcgttggggcgatgagtttgaagcgaaa
atgggtgcggaaggtattcaagcacttttacgcgatatggacttagagcaccaatgtgaa
atgatgcgtgaagagttacaagaaacgaactctgaaacaaaacgtaagaaaatcacaaaa
cgcttaaaattattagaagcattccaacaatccggtaacaaaccggagtggatggtaatg
accgtattaccggtacttccgccggatcttcgtccgttagtaccacttgacggcggtcgt
tttgcgacttcggatctgaacgatttatatcgtcgtgtgatcaaccgtaacaaccgttta
aaacgcttattagatttagtagcgccggatatcatcgtacgtaatgaaaaacgtatgtta
caagagtctgttgatgcgttattagataacggtcgtcgtggtcgtgcgattacaggttct
aacaaacgtccgttaaaatctcttgcagatatgatcaagggtaaacaaggtcgtttccgt
cagaacttattaggtaaacgtgtggactattcaggtcgttcggtaatcaccgtaggtcct
tacttacacctacaccaatgtggtttgccgaaaaaaatggcattggaattattccgtccg
tttatttactctaaattagaatctcgcggcattgcttcaacaatcaaagctgcgaagaaa
atggttgaacgtgaagaaccgatcgtatgggatatccttgcggaagtgattcgtgaacac
ccaattttattaaaccgtgcgccgacacttcaccgtttaggtatccaagcgtttgagcca
atcttaatcgaaggtaaagcaatccagttacacccgcttgtttgtgcggcgttcaatgcg
gacttcgatggtgaccaaatggcggtacacgtaccattaacacttgaagctcagttagaa
gctcgtgcgttaatgatgtcaactaacaatgtactttcaccggcaagtggtgacccgatt
atcgtaccttctcaggacgttgtattaggtctttactatatgacgcgtgagaaagtgaat
gcgaaaggtgaaggaatgtatttccttgacccacgtgaagcggaaaaagcataccgtacc
ggtcaagctgaattacacgctcgcgtaaaagttcgtattaccgaacacgtgaaaaacgaa
gcgggcgaattagttgcggaaactaagttgttagatactactatcggtcgtgcaatctta
tggatgatcgcaccgaaaggtatgccgtttaaagtattcaaccaaacgttaggtaaaaaa
gcgatttcaaaattaatcaacgaatcgtaccgtcgtttaggtttaaaagaatcggtaatc
cttgccgaccaaattatgtataccggtttcgcgtacgctgctcgttcaggtgcgtcagtc
ggtatcgacgatatggtgattccggcacaaaaacacgaaattattcgtgcggcggaagca
gaagtggcagagattcaagaacaatttaactcaggtcttgtaactgcgggcgaacgttat
aacaaagtaatcgatatttgggcggctgcaaacgaacgtgttgcaaaagcaatgatggaa
aacctttcaacggaagaagtcatcaaccgtgaaggtaatccggaaaaacaagcgtcattc
aacagtatctttatgatggctgactcgggtgcgcgtggttctgcagctcagattcgtcag
ttagcgggtatgcgtggtcttatggctcgtccggacggctcgatcatcgaaacaccgatt
accgcgaacttccgtgaaggtctgaacgttcttcagtactttatttcaacccacggtgcg
cgtaaaggtcttgcggatactgcattaaagacagcgaactcaggttacttaacacgtcgt
ttagtagacgtagcacaagacttagtaatcactgaagatgactgtggtacgcacgaaggt
atcgtgatgacgccgttaatcgaaggtggtgatgttaaagaagcattacgtgatcgcgta
ttaggtcgtgtggtggcagaagacgtattaaaaccgggtacggaagaagtattaattcca
cgtaacaccttaatcgatgagaaatggtgtgatgtgattgatgcggaatctgtggacgta
atcaaagtacgttcggtggtaacttgtaacacagacttcggtgtgtgtgcgaaatgttac
ggtcgtgaccttgctcgcggtcaccttatcaaccaaggtgaagcagtgggtgttatcgca
gcgcaatcaatcggtgaaccgggtacacagctaaccatgcgtacgttccacatcggtggt
gcggcttctgcggcagcaaaagaatctagcatccaagtgaaaaacgcaggtacgattaaa
ttaactaacgctaaatttgtaaccaacaaagaaggcaaaatcgtattaacttcacgtaac
acagaattaaccgttatcgacacattcggtcgtaccaaagaaaactataaagtaccttac
ggtgcagtgctttctaaaaacgacggtgcagaagttgcagtaggtgaagtcgttgcgaac
tgggatccgcatacaatgccggtcatctcagaggtaagcggtcgtatccaattcagcgac
atcgtagatggcttaaccgttactcgtcaaactgacgaattaaccggtttatcctctatc
gtggtgcaagatgtgggtgaacgtgcaacagcaggtaaagatttacgtccggcattacgt
ttagttgatgcacaaggtaacgatatcttaattccaagcacagacgttgcagcacaatac
ttcttaccgggtaaagcaatcgtaactttagatgatggtgcggaaatcgaagtcggtgaa
gcattagcacgtattccgcaagaatctgtgggtacgaaagatattaccggtggtcttcca
cgcgtagcagacttattcgaagcacgtaaaccgaaagagccggcaatccttgctgaaatt
tcaggtatcgtgtcattcggtaaagagactaaaggtaaacgtcgtttagtgatcacaccg
gcagaaggcgaagcattcgaagaaatgattccaaaatggcgtcagctcaacgtatttgaa
ggcgagatggtacaacgtggtgacgtaatctctgatggtgcggaaacgccgcacgatatc
ttacgtttacgtggcgttcacgctgtaacggattacatcgtaaatgaagtacaagaagtt
taccgcttacaaggggtaaaaattaacgataaacacatcgaagttatcgttcgccaaatg
ttacgtaaagcggttatcactaacgcatacgacagcgaattcctcgaaggggaacaagtt
gaagtttcacgtgtgaaaattgctaaccgtaaacgtgcagaagaaggtaaaccgcttgtt
gagttcgaacgtgaattacttggtattaccaaagcgtcgcttgcaaccgagtcatttatc
tcagcagcgtcgttccaagaaaccacacgtgttcttactgaagcggcagtggcaggtaaa
cgtgacgaattacgcggcttgaaagagaacgtaatcgtaggtcgtttaatccctgcgggt
accggtttcgcatatcatcaaaatcgtgcgaaaaaacgtaaccagcaagaacaagcggtc
gcttttgaagcaccggttgaaaagctaacgggttcgcaaccgatgctgatatcgaagcgg
aattcgaattcgttgcagacgatgcaactcaaagcctag |
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