Actinobacillus pleuropneumoniae L20 (serotype 5b): APL_1961
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Entry
APL_1961 CDS
T00476
Symbol
hfq
Name
(GenBank) RNA-binding protein Hfq
KO
K03666
host factor-I protein
Organism
apl
Actinobacillus pleuropneumoniae L20 (serotype 5b)
Pathway
apl02024
Quorum sensing
apl03018
RNA degradation
Brite
KEGG Orthology (KO) [BR:
apl00001
]
09120 Genetic Information Processing
09123 Folding, sorting and degradation
03018 RNA degradation
APL_1961 (hfq)
09140 Cellular Processes
09145 Cellular community - prokaryotes
02024 Quorum sensing
APL_1961 (hfq)
09180 Brite Hierarchies
09182 Protein families: genetic information processing
03019 Messenger RNA biogenesis [BR:
apl03019
]
APL_1961 (hfq)
03036 Chromosome and associated proteins [BR:
apl03036
]
APL_1961 (hfq)
Messenger RNA biogenesis [BR:
apl03019
]
Prokaryotic type
Bacterial mRNA degradation factors
Other RNA degradation factors
Chaperones
APL_1961 (hfq)
Chromosome and associated proteins [BR:
apl03036
]
Prokaryotic type
Nucleoid associated proteins
Other nucleoid associated proteins
APL_1961 (hfq)
BRITE hierarchy
SSDB
Ortholog
Paralog
Gene cluster
GFIT
Motif
Pfam:
Hfq
LSM
Hfq_1
Motif
Other DBs
NCBI-ProteinID:
ABN75035
UniProt:
A3N3P9
LinkDB
All DBs
Position
2191781..2192059
Genome browser
AA seq
92 aa
AA seq
DB search
MAKGQSLQDPYLNALRRERIPVSIYLVNGIKLQGQIESFDQFVILLKNTVSQMVYKHAIS
TVVPARSVSHNNGGTSHTQQAPAVEAVADKAE
NT seq
279 nt
NT seq
+upstream
nt +downstream
nt
atggcaaaaggtcaatctttacaagatccatatttgaatgcacttcgtcgtgagcgtatt
cctgtttcaatttatttagttaacggcattaaattacaaggacaaatcgaatctttcgac
caattcgtaattttattaaaaaatacagtaagtcaaatggtttacaaacacgcaatttca
acggtagtacctgctcgttccgtttctcataacaacggcggtacgtcacatactcaacaa
gctcctgcggttgaagcggttgcggataaagcggaataa
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