Actinobacillus pleuropneumoniae L20 (serotype 5b): APL_2006
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Entry
APL_2006 CDS
T00476
Symbol
holD
Name
(GenBank) DNA polymerase III psi subunit protein
KO
K02344
DNA polymerase III subunit psi [EC:
2.7.7.7
]
Organism
apl
Actinobacillus pleuropneumoniae L20 (serotype 5b)
Pathway
apl03030
DNA replication
apl03430
Mismatch repair
apl03440
Homologous recombination
Brite
KEGG Orthology (KO) [BR:
apl00001
]
09120 Genetic Information Processing
09124 Replication and repair
03030 DNA replication
APL_2006 (holD)
03430 Mismatch repair
APL_2006 (holD)
03440 Homologous recombination
APL_2006 (holD)
09180 Brite Hierarchies
09182 Protein families: genetic information processing
03032 DNA replication proteins [BR:
apl03032
]
APL_2006 (holD)
03400 DNA repair and recombination proteins [BR:
apl03400
]
APL_2006 (holD)
Enzymes [BR:
apl01000
]
2. Transferases
2.7 Transferring phosphorus-containing groups
2.7.7 Nucleotidyltransferases
2.7.7.7 DNA-directed DNA polymerase
APL_2006 (holD)
DNA replication proteins [BR:
apl03032
]
Prokaryotic type
DNA Replication Elongation Factors
Elongation factors (bacterial)
DNA polymerase III holoenzyme
APL_2006 (holD)
DNA repair and recombination proteins [BR:
apl03400
]
Prokaryotic type
SSBR (single strand breaks repair)
MMR (mismatch excision repair)
DNA polymerase III holoenzyme
APL_2006 (holD)
BRITE hierarchy
SSDB
Ortholog
Paralog
Gene cluster
GFIT
Motif
Pfam:
DNA_III_psi
TPR_EMC2
TelK_stirrup
Motif
Other DBs
NCBI-ProteinID:
ABN75080
UniProt:
A3N3U4
LinkDB
All DBs
Position
2231501..2231893
Genome browser
AA seq
130 aa
AA seq
DB search
MNIPQWVLTKPQVLKGDAQIRLDNAVKLVVVCEENHQASGLFLDILRTLQLQPNQYQWLD
AEQAQRLAFEHHPIFWLIQSELQAVEIAKKFANQTAWQHSSWKDLTNVTTKRQLWRQMAA
FYQHFEENHD
NT seq
393 nt
NT seq
+upstream
nt +downstream
nt
atgaatattcctcaatgggtgctgacaaaaccgcaagtattaaagggcgatgcgcaaatt
cgcttggataacgcggtgaaactggttgtggtatgtgaagagaatcatcaagctagcggt
ctgtttttggatattttacgcaccttgcagttacagccgaaccaatatcaatggttggat
gcggaacaagcccagcgtttagcttttgaacatcatcctattttttggctaatccaatca
gaattacaagcggttgaaattgcaaaaaaatttgcaaatcagaccgcttggcagcatagc
tcgtggaaagatttaactaatgtcacaactaaacgccaactttggcgacaaatggcggca
ttttatcagcattttgaggaaaatcatgattga
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