Anas platyrhynchos (mallard): 101789416
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Entry
101789416 CDS
T02816
Symbol
HMBOX1
Name
(RefSeq) homeobox-containing protein 1 isoform X1
KO
K24885
homeobox-containing protein 1
Organism
apla
Anas platyrhynchos (mallard)
Brite
KEGG Orthology (KO) [BR:
apla00001
]
09180 Brite Hierarchies
09182 Protein families: genetic information processing
03000 Transcription factors [BR:
apla03000
]
101789416 (HMBOX1)
Transcription factors [BR:
apla03000
]
Eukaryotic type
Helix-turn-helix
Homeo domain POU
101789416 (HMBOX1)
BRITE hierarchy
SSDB
Ortholog
Paralog
Gene cluster
GFIT
Motif
Pfam:
HNF-1_N
Homeodomain
Homeobox_KN
HTH_3
AbiJ_NTD3
DUF494
HTH_24
HTH_26
HTH_TSHZ3
CUT
HTH_31
HTH_23
Motif
Other DBs
NCBI-GeneID:
101789416
NCBI-ProteinID:
XP_005024175
Ensembl:
ENSAPLG00000006003
LinkDB
All DBs
Position
3:complement(117548923..117666636)
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AA seq
465 aa
AA seq
DB search
MLRTFPVVLLETMSHYTDEPRFTIEQIDLLQRLRRTGMTRHEILHALETLDRLDQEHSDK
FGRRSSYGGGSYSNSTNNVPASSSTATASTQTQHSGMSPSPSNSYDTSPQPCTTNQNGRE
SNERLSAFNGKMSPTRYPLANSLAQRSYSFEASEEDLDIDDKVEELMRRDSSVIKEEIKA
FLANRRISQAVVAQVTGISQSRISHWLLQQGSDLSEQKKRAFYRWYQLEKTNPGATLSMR
PAPIPIEEPEWRQTPPPVTATSGTFRLRRGSRFTWRKECLAVMESYFNENQYPDEAKREE
IANACNAVIQKPGKKLSDLERVTSLKVYNWFANRRKEIKRRANIEAAILESHGIDVQSPG
GHSNSDDVDGNDYSEQDTWQVRNGEEEGRCSEGGREAEKVEEDRRICSKQASYTIHATRN
DDSTSHSDHQDPISLAVEMAAVNHTILALARQGANEIKTEALDDD
NT seq
1398 nt
NT seq
+upstream
nt +downstream
nt
atgctcagaacttttccagtagttctgctggaaaccatgtctcactacacagacgaacca
agatttaccatagagcagatagacctgcttcagcgcctgagacgtacgggaatgaccaga
catgaaatccttcacgcgctggaaaccttggatcgtcttgatcaagagcatagcgacaaa
ttcggaagaaggtctagctacggaggcggttcctacagcaacagcaccaacaatgtccca
gcatcttcctctacggccacagcttcaacacagacccagcattcggggatgtccccgtca
ccgagcaacagttacgacacctccccacagccttgcactactaatcagaacgggagggag
agtaacgagaggttgtctgcgttcaacgggaagatgtcaccgacccgctacccgctcgca
aacagcttggctcaaaggtcgtacagttttgaagcttcggaagaggacttggacattgat
gacaaagtggaagagctgatgaggagggacagcagtgtgataaaggaggaaatcaaagcc
ttcctagccaatcggagaatttcccaagcagttgttgcacaggtaacaggtatcagtcag
agccggatctcccattggctgttgcagcaggggtcggacctgagtgaacaaaagaaaagg
gcattttacagatggtaccagcttgagaagacaaatcctggggctacgttaagcatgaga
cccgctcctatcccaatagaagagccagaatggagacagacgcctcccccagtcacagct
acctcggggaccttcagactacggcgaggcagtcggttcacgtggagaaaggagtgcctg
gctgttatggaaagttacttcaatgagaatcaatatccggacgaggcaaagagagaagaa
attgcaaacgcctgtaatgcagttatacaaaagccaggaaaaaagttatcggatttggag
cgagttacctcccttaaagtgtacaattggtttgccaacagaagaaaggaaatcaagaga
cgagccaatatcgaagcagcaatcctggagagccatggaatagatgtacagagtccggga
ggtcattccaacagtgacgacgttgatggcaatgactattcagagcaggacacttggcaa
gtacgcaatggggaggaggagggaagatgttcagagggaggcagagaagcagagaaggta
gaagaagacaggaggatctgctccaaacaagcaagttacaccattcacgccacacgcaat
gatgacagcactagccatagtgaccaccaagaccccatctcgttagccgtggaaatggca
gcggtaaaccacaccatcttggcattggcccggcaaggagccaacgagatcaagacagag
gctctagacgacgactga
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