Anas platyrhynchos (mallard): 101789649 Help Entry 101789649         CDS       T02816                                  Symbol HTT Name (RefSeq) huntingtin isoform X1   KO K04533   huntingtin Organism apla  Anas platyrhynchos (mallard) Brite KEGG Orthology (KO) [BR:apla00001]  09180 Brite Hierarchies   09182 Protein families: genetic information processing    03019 Messenger RNA biogenesis [BR:apla03019]     101789649 (HTT)    04131 Membrane trafficking [BR:apla04131]     101789649 (HTT)    03029 Mitochondrial biogenesis [BR:apla03029]     101789649 (HTT) Messenger RNA biogenesis [BR:apla03019]  Eukaryotic type   mRNA surveillance and transport factors    mRNA cycle factors     Common to processing body (P body) and stress granule      101789649 (HTT) Membrane trafficking [BR:apla04131]  Endocytosis   Rab GTPases and associated proteins    Rab associated proteins     101789649 (HTT) Mitochondrial biogenesis [BR:apla03029]  Mitochondrial quality control factors   Regulator of mitochondrial biogenesis    Other regulator of mitochondrial biogenesis     101789649 (HTT) SSDB OrthologParalogGFIT Motif Pfam:  Htt_C-HEAT Htt_N-HEAT Htt_bridge Htt_N-HEAT_1 HEAT HEAT_GCN1 HEAT_2 HEAT_EF3_N Motif Other DBs NCBI-GeneID:  101789649 NCBI-ProteinID:  XP_027311407 Ensembl:  ENSAPLG00000007777 LinkDB All DBs Position 4 Genome browser AA seq 3096 aa AA seqDB search MATMEKLMKAFESLRSFQQQQGPAAIPEEPLQRPKKELSTTKKDRVNHCLTICENIVAQS LRNSPEFQKLLGIAMEVFLLCSEDAESDVRMVADECLNKVIKVLMDSNLPRLQLELYKEI KKNGASRSLRAALWRFAELAHLVRPQKCRPYLVNLLPCLTRISKRPEESVQETLAAAIPK IMAAFGNFANDNEIKVLLKAFIANLKSSSPTIRRTAAGSAVSICQHSRRMQYFYAWLLNV LLGLLVPVDDDHPTLLILGVLLTLRYLIPLLQQQVKDTSLKGSFGVTRKEAEISPSPDQL VQVYELTLHYTQHQDHNVVTGALELLQQLFRTPPPELLHALTTTGGIAQVSVSKDESTIR NRSGSIVELIAGGGSSCSPVLARKHKGKILLGEEEGLEDDSETRSDVSAASFAASVKGEI TSELASSSGVSTAGSAGSSAADPTGHDIITEQPRSQHTLQSDSVDLTSCDLTSTATEGED DDVLSRSSSQISAVQSDPTMDLNDGTQASSPISDSSQTTTEGPDSAVTPSDSSEIVLEGA EGQYSGMQIGQLQDEEDEAANILQDDSSESFRNSSIALQQPHLLKTTSHSRQPSDGSVDR FTSKEDAADPGDHENKPSRIKGDIGHYTDGNSAPLVHCVRLLSASFLLTGEKGALVPDRD VRVSVKALAVSCVGAAIALHPEAFFSKLYKTPLEAMGEEYEEQYVSDILNYIDHGDPQIR GATAILCGTIINSILLKSRFDVEKWLINIRSSTGNLFSLVDCIPLLQKTLKDESSVTCKL ACTAVRHCIMSLCSSSYSELGLQLIVDLLTLKNSSYWLVRTELLETLAEVDFRLVNFLEG KTDSLHRGVHHYTGLLKLQERVLNNVVISLLGDEDPRVRHVAASSLMRLVPKLFYNCDQG QADPVVAVARDQSSVYLKLLMHETQPPSHFAVSTITRTYRGYNMLQSPTDVTMENNLSRV VAAISHALTISTTRALTFGCCEALCLLSTTFPVCTWTVGWHCGVSQPNSSDEAQKGCTIG MAGMVLSLLSSAWFPLDLSAHQDALILTGNLLAASAPKCLKNPWSAEEDSNQGAAKQEEP WPALADRTLVTLVEQLFSHLLKVINICAHVMDDVAPGPAVKAALPSLTNPPSLSPIRRKG KEREPVEQASVPMSPKKGGETSPATRQTDASGPVPTSKSSSVGSFYHLPSYLKLYDVLKA THANYKVTLDLQNSNEKFGCFLRSALDVLSQILELATLQDIGKCVEEILGYLKSCFNREP TMATVCVQQLLKTLFGTNLASQYDGLSSNTSKAQGKAQRLGSSNLRPGLYHYCFMAPYTH FTQALADASLRNMVQAEQEHDASGWFDVLQKVSTQLKTSISSAAKHRADKNAIHNHIRLF EPLVIKALKQYTTTTSVQLQRQVLDLLAQLVQLRVNYCLLDSDQVFIGFVLKQFEYIEVG QFRESEAIIPNIFFFLVLLSYERYHSKQIIGIPKIIQLCDGIMASGRKAVTHAIPALQPI VHDLFVLRGTNKADAGKELETQKEVVVSMLLRLIQYHQVLEMFILVLQQCHKENEDKWKR LSRQIADIILPMLAKQQMHIDSHDALGVLNTLFEILAPSSLRPVDMLLRSMFVTPKTMAS VSTVQLWISGILAILRVLISQSTEDIVLSRIQELSFSPYLISCQAINRLRRGENNVSTPE DRAEVKQAKYLPEETFSRFLLQLVGILLEDIVTKQLKVDMNEQQHTFYCQELGTLLMCLI HIFKSGMFRRITAAATRLFTGDGSDGSFYTLESLSDLVQSMIPTHPSLVLLWCQILLLVN YTNYNWWSEVHQTPKRHSLSTTKLLSPQICGDSDESDSESKRGMCNREIVRRGALILFCD YVCQNLHDSEHLTWLIVNHVQDLINLSHEPPVQDFISAVHRNSAASGLFIQAIQSRCENL AAPTTLKKTLQCLEGIHLSQSGAVLTLYVDKLLCTPFRVLARMVDTLACRRVEMLLAATL QNSITQLPVEELDRIQEYLQSSGLATRHQRLYSLLDRFRLMVAPDTTSPSPVVTSHPLDG EGQPALETVVLDKDWYVSLVRSQCCIKSDSALLEGAELVNRIPQPDLNSFMTCKEFNLSL LAPCLSLGMNEISRDQKSSLFETSRRVTLDHVSTTVLNLPANHQVFQPLLPTEPSAYWKK LSDIFGDEVMYRSVMTLCRALAQYLLLLSKLPTGLRVPPDKEDDILKFVVMSVEALSWRL MHDQLPLSIDLQAALDCCCLTLQQPNLWNLLASAVNVTYACSLINCIRFIIEAVAVEPGN QLLSPERKKNTSKGLNEDEVDSNAQKNKHVTAACEMVAEMVECLQTVLALGHQRNSSIPA FLTPVLKNIIISLARLPLVNSYTRVPPLVWKLGWSPKPAGDFGTVFPEIPVEFLQEKEIF KEFIYRINTLGWISRTQFEETWATLLGVLVTQPIVMDQEESQQEEDTERTQINVLAVQAI TSLVLSAMTIPVAGNPAVSCLEQQPRNKALKALDTRFGRKLSVIRGIVEQEIQAMVSKRD NIATHHLYQAWDPVPSLSPATTGALISHEKLLLQINTEREIGDMDYKLGQVSIHSIWLGN NITPLREEEWGEDEEDENDVPAPSSPPTSPINTRKHRAGVDIHSCSQFLLELYSQWILPS NPSKRTPVILISEVVRSLLAVSDLFTERNQFEMMYTTLTELRKVHPSEDEILIQYLIPAT CKAAAVLGMDKAVAEPVSRLLESTLRSTHMPSRIGALHGILYILECDLLDETAKQLIPII SDYLLSNLRGVAHCVNVHNQQHILVMCAAAFYLIENYPLDVGPEFSAGIIQMCGVMVSGS DESTPSIIYHCVLRGLERLLLSEQLSRLDSESLVKLSVDRVNVQSPHRAMAALGLMLTCM YTGKEKISPSRSTDANPAAPDSESVIVAMERVSVLFDRIRKGFPFEARVVARILPQFLDD FFPPQDVMNKVIGEFLSNQQPYPQFMATVVYKVFQTLHTTGQSSMVRDWVMLSLSNFTQR TPVAMAMWSLSCFFVSASTSQWISAILPHIISRMGKLEQVDVNIFCLVAIDFYRHQIDEE LDRRAFQSVFEVVASPGTPYHRLLTCLQNVHKVTAC NT seq 9291 nt NT seq  +upstreamnt  +downstreamnt atggccacgatggagaagctgatgaaggccttcgagtcgctgcgctccttccagcagcag caggggccggccgccatccctgaggagccgctgcagagaccaaagaaagagctttcaact accaagaaagatagagtgaatcattgcctgacaatatgtgaaaacatcgttgctcagtct ttaagaaattctccagaatttcagaaactgctggggattgctatggaagtctttctcctc tgcagtgaggatgcagaatctgatgtccggatggttgctgatgaatgccttaataaagtt attaaagttttgatggattccaatctccctaggttacaattagaattgtataaagagatt aaaaagaatggtgcttcccgaagtctacgtgctgcactctggagatttgctgagcttgct catctagttcggcctcaaaaatgcaggccatacttagtgaaccttttgccctgtttaaca cgaataagtaagagacctgaagaatcagtacaagaaacactagctgcagcaataccaaaa atcatggcagcatttggcaattttgcaaacgacaatgagattaaggttttattgaaggct ttcatagctaatcttaaatccagttcccctactatccgtcgaactgcggcaggatcagca gtaagcatctgtcaacattcacgaagaatgcagtatttttatgcctggttattgaatgta cttttaggcttgttggttcctgtagatgatgatcatcctactcttttaattttgggtgtt ttacttacactaaggtatctcatacctttattgcaacaacaagtgaaggataccagcctg aaaggcagtttcggtgtaacaaggaaagaagcagagatttcaccttcaccagaccagctt gtacaggtttatgaattgactctgcattatactcagcatcaggaccacaacgttgtgact ggagctttagaattattacagcagcttttcagaacaccaccacctgaacttctccatgcc ctgaccactacaggtggcattgcacaggtcagtgtatccaaagatgaatccaccatcagg aaccggagtgggagcatagtggagctcatagctggaggggggtcttcatgcagccctgtt cttgcaagaaagcataaaggtaaaatacttctcggtgaagaagaaggtttggaagatgat tctgaaacccgatcagatgtcagtgctgcatcatttgcagcttctgtgaagggcgagatt accagtgaactagcttcttcatcgggtgtatcaacagctgggtcagcagggagttcagct gctgatcctactggacacgatatcattaccgagcagccacgttctcaacatacgttgcag tcagactctgtagacctgacgagctgtgatttgacaagcacagctacggaaggggaagat gatgatgtgcttagtcgaagctccagtcagatcagtgctgtccagtcagatcccactatg gacttgaatgacggtacacaggcttcctcaccaattagtgatagctctcagactactaca gaaggtccagactcagctgtaaccccttcggacagttctgaaattgttttggagggtgct gaaggacaatattctggaatgcaaattgggcagctgcaagatgaggaagatgaagctgct aatattctccaggatgattcatcggagtctttcagaaattcttctattgctcttcagcag cctcacctgttgaaaaccacgagccacagtaggcagccttctgatggcagtgttgataga tttacatcaaaagaggatgcagcagatcctggtgaccatgagaataagccatccaggata aaaggagatataggccactatacagatggaaattctgctcctctagtgcactgtgttaga cttctgtcagcctcttttctacttactggagagaaaggagctttagttccagatagagat gtgagagtcagtgtaaaagccctggcagtcagttgtgttggagcagccattgcccttcac cctgaggctttcttcagcaaactgtataaaacaccccttgaagcaatgggagaagagtat gaggagcagtatgtatcagatattctgaactacattgaccatggagatccccagattaga ggagctactgctattctctgtggaacaattatcaactctattttactgaaatcccgcttt gatgtggaaaaatggctaataaacatcagaagctcaacaggaaatctcttttccttggta gactgcatacctctgttacagaaaacgttgaaagatgagtcctctgtaacatgcaaactg gcttgtacagctgtgaggcattgcatcatgagcttgtgtagtagcagttacagtgaacta ggtttacaattaattgttgacctccttacgctgaagaatagctcatactggctagtaagg acggaacttctggaaacacttgcagaggtagattttcggctagtcaacttcttggaagga aaaactgacagcttgcacagaggtgttcatcattatactggtctactaaaactgcaggag agagtgctcaataatgttgtaatctctctgcttggtgatgaagatccaagagtgcgacat gtggctgcatcctcattaatgaggcttgttccaaagctgttttataactgtgatcaagga caggctgatccagtggtggcagtagcaagagaccaaagcagtgtctacctgaagctacta atgcatgaaacacagcctccatctcactttgcagtgagcactatcaccagaacatataga ggctacaatatgctgcaaagtccaacagatgtcactatggaaaacaatctttcaagggtt gttgcagcaatttcccatgcattgacaatatccactacaagagcacttacatttggctgc tgtgaagctttgtgtcttctctccacaacgtttccagtctgtacctggacggtgggatgg cactgtggtgtatcccagccaaattcttcagatgaagctcagaagggctgcactattgga atggcaggcatggtcctctctcttctttcatcagcatggttcccgttggacctttctgcc catcaggatgctttaattttgactggaaacttgcttgcagcaagtgctcccaagtgctta aagaatccgtggagtgctgaagaagattcaaaccaaggtgctgcaaagcaggaggaacca tggccagctctggcagatcgaactcttgttactttggtagaacagctcttctctcatctg ctgaaggtcattaatatttgtgcccatgtaatggatgatgttgctcctggtccagcagta aaggcagcattaccttctcttacaaacccaccttctcttagtccaattcggaggaagggg aaagagagggagcctgtggagcaggcttctgtgccaatgagccctaaaaagggtggtgaa actagtccagctactaggcaaactgatgctagtgggcctgttccaacaagtaaatcatct tcagtaggaagcttttatcatcttccatcatatctgaagttatatgatgtcttgaaagca actcatgctaattataaggttactttagatctccaaaacagtaatgaaaagtttggatgc ttcttgaggtctgccttagatgttctgtcgcaaatcttggaacttgcaactcttcaagac attggaaagtgtgtggaagaaattttgggatatctgaaatcatgtttcaacagagaacca actatggccacagtttgtgtacagcagttactgaaaacattatttgggacaaatctggct tctcagtacgatggcttgtcttcaaatacgagtaaagctcaaggcaaagctcagcgttta ggttcttccaatctgagacctgggctctatcactactgcttcatggcaccatatacacat tttacacaggcacttgctgatgctagtctgaggaacatggttcaggctgagcaggaacac gatgcttcaggatggtttgatgtgctgcagaaagtttctacacagctgaaaaccagcatt agcagtgcggcaaaacaccgtgctgataagaatgctattcacaatcacattcgtttattt gaaccccttgtcataaaagcattgaaacaatacactacgaccacatcggtacagctgcag agacaagttttagacttgcttgctcaactggttcagctacgagttaactactgtcttctg gattcagatcaggtgtttattggatttgtgctaaagcagtttgaatacattgaagttgga cagttcagggagtctgaagcaattattcctaatatctttttttttctggtgttgctgtct tacgagcggtatcattccaaacagataatcggaattcctaagatcattcagctgtgtgat ggaatcatggccagtgggaggaaagctgttacacatgcaataccagctctgcagcccatc gttcatgatctctttgtgttaagagggacgaacaaagctgatgctggaaaagagttggaa acacagaaggaggtggtagtgtcaatgctgctgagacttatccagtaccatcaggtgctg gaaatgttcatcttagtgttgcagcagtgtcataaggaaaatgaagacaaatggaagaga ttgtcccggcaaatagctgacattattctcccaatgcttgcaaaacaacagatgcatata gattctcatgatgccctcggagtattgaacactttgtttgaaattttggctccttcttcc cttcgccctgtggacatgcttttaaggagtatgtttgttacccctaaaacaatggcatca gtgagcactgttcagctatggatttctggaattttagctatccttagagttctgatttca caatccacagaagacatagttctatcccgtattcaggagctttctttctcaccatatttg atttcgtgtcaagcaattaacagactgagacgtggagaaaataatgtatccacaccagag gatcgtgctgaggttaaacaggctaaatatctgcctgaagagacgttttctaggttctta ttacaactggttggtattctactggaagatattgtcaccaaacaattgaaagtggatatg aatgagcagcagcatactttctactgccaggagctgggcacgctgcttatgtgcttaata catatcttcaaatcaggaatgttcagaagaatcacagctgcagccaccaggctttttacg ggagatggatccgatggtagtttctatacccttgaaagtttgagtgaccttgttcagtcc atgattcccacacatccttctttagttcttctttggtgtcagatccttcttcttgtcaat tacaccaactacaattggtggtcagaagtgcatcaaactccaaagagacacagtctgtct actactaaattacttagccctcagatatgtggagacagtgatgaatcagattccgaatct aaacgcggcatgtgcaatcgagagatagtgagaagaggagcactcattcttttctgtgac tatgtctgtcaaaacctacatgattcagaacacttgacctggcttattgtgaatcatgtt caggacttgattaatctgtcccatgagcctccagtacaagacttcattagcgctgttcac aggaattcagcagccagtggtctctttatccaggccattcagtcacgatgtgagaatctt gcagctcctacaactctgaagaagactttacagtgcttagaggggatacatctcagccag tctggggctgtcttaacactgtatgttgataagcttctgtgtactccattccgtgtgctt gctcgcatggttgacacactagcttgccgtcgggtagaaatgcttttggctgcaacttta cagaacagcattactcagttaccagttgaagaactggatagaattcaggaatatcttcaa agcagtggattagcaacaagacaccaaagactttactcactcttggataggtttcgactt atggtagcaccagacacaactagtccttcacctgtggttacttcacacccactagatgga gaaggccaaccagctttagagactgtagttctagacaaagactggtatgtgtcactagtg aggtcacagtgttgcatcaagtcagactcagcactactagaaggtgcagaacttgtaaat aggattcctcagcctgacctgaactccttcatgacctgcaaggaattcaacctaagcttg ttagcgccttgtttaagccttggcatgaacgaaatctcaagagaccagaagagtagcctc tttgaaacatctcggagggtaactctggaccatgtgtctaccactgtactaaaccttcct gcaaaccaccaggttttccaaccactattgccaactgagccatcagcctactggaaaaag ctaagcgatatctttggagatgaggtgatgtatcggtcagtgatgacactttgtcgtgct ctggctcagtatttgttgttactctcaaaactaccaacgggtctccgtgttcctcctgat aaagaggatgatatcctgaaatttgtggttatgtcagtagaggcattatcatggcgttta atgcatgaccagcttccactaagtatagatcttcaagctgctctggattgttgctgtttg acattacagcagcctaacctctggaatttgttggcctctgcagttaatgtgacatatgct tgctccttaattaactgcattaggtttattatagaagcagttgcagttgaaccgggaaat caacttcttagtcctgaaagaaagaagaatacttcaaaaggcttaaatgaggatgaagtt gattcaaacgcacagaaaaataaacatgttactgcagcttgtgaaatggttgctgagatg gtggaatgtttacagactgtcctggctttggggcatcaaagaaacagcagtataccagcg tttctgactcctgtcctcaagaatatcatcatcagtttagcaaggctgcctctagtgaac agttacacaagagtacctcccttggtctggaaattaggctggtcgccaaagcctgcaggt gactttggcacagtttttcctgaaatcccagttgaatttcttcaagaaaaagaaatcttt aaagagttcatctatcgcattaatacacttggatggatcagccgtacccagtttgaggag acttgggctactttgctcggtgtacttgtaactcagcctatcgtaatggaccaagaagag agccaacaagaggaagatacagagaggacccaaattaatgttcttgcagtacaagccata acttccttggtgctgagtgcaatgacaatacctgttgcaggcaatccagcagtcagctgt ttggaacagcagccccgcaacaaagctttaaaagctttggacacgaggtttgggaggaag ctaagtgttatcaggggaattgttgaacaagaaatccaagcaatggtatctaagagagat aatattgctactcatcacttatatcaagcttgggatcccgttccatcactttctccagct actacaggtgctcttatcagccatgaaaaactcttactgcagatcaatactgaacgagaa ataggagatatggactacaaactgggacaggtctctatacactccatatggttaggaaat aatatcactccattgagagaagaagaatggggtgaggatgaagaagatgagaatgacgta cctgctccttcttcaccaccaacctctcctattaacaccaggaagcatcgggctggtgta gacatacattcttgttctcagttcttgcttgagctatatagtcaatggatactgccatca aaccctagcaagagaacaccagtcattttgattagtgaagtggtgcgatcacttctggca gtatcagacttatttacagaaaggaatcagtttgagatgatgtacactacattgacagaa ttgcgaaaggtgcatccatcagaagatgagattcttatacagtatttgataccagccact tgtaaagctgctgctgttctaggaatggataaagctgtagctgaaccagtaagtcgactg ctggaatccactctaagaagtacccacatgccaagtcgaattggagctctgcatggaatt ctttatatccttgagtgtgacttgcttgatgagacagcgaagcagctcattccaattatc agcgattatttgctctccaatttgagaggagtagcacattgtgtgaatgtccataaccaa cagcacatcttagtaatgtgtgcagctgcattctatttgatagagaattatccacttgat gtaggtcctgaattctctgcaggaattatacagatgtgtggagtcatggtgtctggaagt gacgaatcaacgccatccattatttatcattgtgtcctgagaggattggaacgactcctc ctttcagagcaactttctaggctggatagtgaatctcttgttaaactgagtgttgacaga gtgaatgtgcagagcccccacagagcgatggcagcacttgggttgatgctgacttgcatg tacacaggaaaggaaaaaatcagccccagtcgttccacagatgcaaatcctgcagcccct gacagtgagtctgtgattgtggctatggaacgcgtgtctgtcctttttgataggatcagg aagggatttccttttgaagctagagtagtggcccggatccttccacagttcctggatgac tttttccccccgcaagacgtaatgaataaagttattggagaatttttatccaatcagcag ccttatccgcaatttatggcaacagtcgtttataaggtgttccagacactacataccact ggacagtcctcaatggtccgtgactgggtgatgctgtctctctctaatttcacacaaaga acaccagtggcaatggccatgtggagtctttcctgtttttttgtcagtgcttccaccagt caatggatttcagcgattcttccacatattatcagcagaatgggaaaactggagcaagtg gatgttaacatcttctgtctggtggccatagacttctaccgacatcagatagatgaagaa ttagaccggagggcctttcagtcagtgtttgaggtggtagcatcaccaggaacgccatat catcgcctactaacttgtttgcaaaatgtccacaaggtcacagcatgttga

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