Anas platyrhynchos (mallard): 101789740
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Entry
101789740 CDS
T02816
Symbol
TAF5
Name
(RefSeq) transcription initiation factor TFIID subunit 5
KO
K03130
transcription initiation factor TFIID subunit 5
Organism
apla
Anas platyrhynchos (mallard)
Pathway
apla03022
Basal transcription factors
Brite
KEGG Orthology (KO) [BR:
apla00001
]
09120 Genetic Information Processing
09121 Transcription
03022 Basal transcription factors
101789740 (TAF5)
09180 Brite Hierarchies
09182 Protein families: genetic information processing
03021 Transcription machinery [BR:
apla03021
]
101789740 (TAF5)
03036 Chromosome and associated proteins [BR:
apla03036
]
101789740 (TAF5)
Transcription machinery [BR:
apla03021
]
Eukaryotic type
RNA polymerase II system
Basal transcription factors
TFIID
101789740 (TAF5)
Coactivators
SAGA/TFTC/STAGA complex
101789740 (TAF5)
Chromosome and associated proteins [BR:
apla03036
]
Eukaryotic type
Histone modification proteins
HAT complexes
PCAF complex
101789740 (TAF5)
STAGA complex
101789740 (TAF5)
TFTC complex
101789740 (TAF5)
SAGA complex
101789740 (TAF5)
SLIK complex
101789740 (TAF5)
BRITE hierarchy
SSDB
Ortholog
Paralog
Gene cluster
GFIT
Motif
Pfam:
Beta-prop_WDR5
WD40
Beta-prop_WDR3_1st
Beta-prop_THOC3
WD40_Prp19
TFIID_NTD2
Beta-prop_WDR3_2nd
WD40_CDC20-Fz
WD40_WDHD1_1st
Beta-prop_CAF1B_HIR1
WD40_Gbeta
Beta-prop_WDR36-Utp21_2nd
Beta-prop_TEP1_2nd
EIF3I
Beta-prop_EML_2
WD40_MABP1-WDR62_2nd
Beta-prop_WDR90_POC16_2nd
Beta-prop_EML
WDR55
Beta-prop_WDR36-Utp21_1st
NBCH_WD40
WD40_MABP1-WDR62_1st
Beta-prop_WDR75_1st
ANAPC4_WD40
Beta-prop_IFT122_1st
Beta-prop_TEP1_C
WDR90_beta-prop_4th
Beta-prop_Aladin
Beta-prop_RIG_2nd
Beta-prop_SCAP
Beta-prop_WDR41
Beta-prop_VPS8
Beta-prop_IFT140_1st
Beta-prop_Vps41
Beta-prop_EIPR1
WD40_RFWD3
Beta-prop_DCAF4
Beta-prop_HPS5
Beta-prop_WDR19_1st
Beta-prop_DCAF12
WD_LRWD1
Beta-prop_SPT8
Beta-prop_Nup120_160
Tricorn_2nd
PEP5_VPS11_N
CDK5RAP3
Beta-prop_ACSF4
RAB3GAP2_N
eIF2A
VPS8_N
VID27
Motif
Other DBs
NCBI-GeneID:
101789740
NCBI-ProteinID:
XP_027316496
Ensembl:
ENSAPLG00000011406
LinkDB
All DBs
Position
6:24607219..24618040
Genome browser
AA seq
794 aa
AA seq
DB search
MAAVAEEPPEVAAGKPDPEAGTPPQPPAAAPPAAAASSATTPAAPPAPAAEGEPAGNGGE
AAAAAAAKAAAPGPAASPAALDRQTLVAVLQFLRRSNLRESEEILRREARLLGDDLGAAA
LSPAGAGLLGTAGGEGDAGGSEALLNRVTAAAAISIGGSVATVASASPGVAAAATVPPGK
VGGGVVEDQPDVSAVLSAYNQQGDPTLYEEYYSGLKNFIECSLDCHRAELSQLFYPLFVH
MYLELVYNQHESEAKSFFERFHGDQECYYQDDLRVLSSLTKKEHMKGNETMLDFRTSKFV
LRISRDSYQLLKRHLQEKQNNQIWNIVQEHLYIDIFDGMPRSKQQIDAMVGSLAGEAKRE
ANKAKVFFGLLKEPEFDVPLDDEDEEGENEEGKPKKKKPKKDSVGSKSKKQDPNAPPQNR
IPLPELKDSDKLDKVMNVKEAARRVRLGPECLPSICFYTFLNAYQGLTAVDITDDSSMIV
GGFADSTVRVWSVTPKKLRSVKAAADLSLIDKESDDVLERIMDEKTASELKILYGHSGPV
YGTSFSPDRNYLLSCSEDGTVRLWSLQTFTCLVGYKGHNYPVWDTQFSPYGYYFVSGGHD
RVARLWATDHYQPLRIFAGHLADVTCTRFHPNSNYIATGSADRTVRLWDVLNGNCVRIFT
GHKGPIHSLAFSPNGRFLATGATDGRVLLWDIGHGLMVGELKGHTDTIYALRFSRDGEIL
ASGSMDNTVRLWDAVKAFEDLETDDFTTATGHINLPENSQDLLLGTYMTKSTPVVHLHFT
RRNLLLAAGAYSSQ
NT seq
2385 nt
NT seq
+upstream
nt +downstream
nt
atggcggcggtagctgaggagccgccggaggtggcggcggggaagcccgaccctgaggcg
gggacgccgccgcagccccccgccgccgctcccccggccgccgccgcctcctccgccaca
acccccgccgctcctccggctccggcggctgagggggagccggcgggaaacggcggggag
gcggcagccgccgctgctgctaaggctgcggcaccgggcccggccgcttcccccgcggcg
ctggaccggcagacgctggtggccgtgctgcagttcctgcggaggagcaacctgcgcgag
tccgaggagatcctccgccgggaagctcgcctgctcggcgacgacttgggagccgctgcc
ctcagccccgccggagccgggcttttgggaacggccggaggcgagggggatgcgggcggc
agcgaggcgctgctcaaccgggtcaccgccgctgccgccatctccataggaggcagcgtc
gccaccgtcgcctctgccagccccggggtggcggcagcggcaaccgtgccgccggggaaa
gttggaggaggtgttgtggaagatcagccagatgtgagcgcagtattatccgcctacaat
cagcagggggaccccacgctgtacgaggaatactacagcggattaaaaaacttcattgag
tgctcgctggactgtcatcgagctgaattgtctcagctgttttatcctctctttgtgcac
atgtacttggagttggtctacaaccagcacgagagtgaggcaaagtctttttttgaaaga
tttcatggggatcaggagtgttattaccaggacgacctccgggtattatctagtttaacc
aaaaaagaacatatgaaaggtaacgagaccatgctggatttccgaacgagcaagtttgtg
ctgcgtatttcccgggactcttaccaactcttgaagaggcatctgcaggaaaagcagaac
aatcagatctggaacattgttcaggaacatctctacattgatatctttgatggaatgcct
cgaagtaaacagcagatagatgccatggttggaagcttggctggggaggcaaaacgagag
gcaaataaagcaaaggtgttctttggcttactgaaagaaccagagtttgatgtgcctttg
gatgatgaagatgaagaaggagaaaacgaggaaggaaaaccaaagaagaaaaaacctaaa
aaagatagtgtaggatcaaaaagtaaaaaacaagaccctaacgctcctccccaaaacaga
attcctctgcctgaactgaaagactctgacaaactggataaagtaatgaatgtgaaggaa
gctgccagacgtgtgcgtcttggcccagagtgcctgccctccatctgcttctacacattc
cttaatgcttaccagggtctaactgcagtggatattaccgatgactctagcatgattgta
ggaggctttgctgactctacagtaagagtgtggtctgtgactccgaaaaagctacgtagt
gtgaaagctgcagcagacctcagtctaatcgacaaagaatcagacgatgtcctggagagg
atcatggatgagaaaacagccagtgagttgaagattttgtatggtcacagtggacctgtc
tatggcaccagcttcagtcctgataggaactatctgttgtcctgttctgaggatggcaca
gtcagattgtggagtctccaaacgttcacatgtttggtgggatataaaggacacaattat
ccagtatgggatacacagttctcgccttatgggtattactttgtgtcagggggacatgac
agagtggctcgattgtgggcaacagatcactaccagcctttacgaatatttgctggccat
cttgctgatgtcacatgtacccgatttcatcccaactctaactacattgccactggctca
gcagacaggactgtacggctctgggatgttctaaatgggaattgtgtaagaatattcact
ggacataagggaccaattcattcgttggcattttctcctaatggacgattcctggctact
ggagcgacagatggcagagttttgctgtgggatattggacatggcttgatggttggagaa
ttgaaagggcacactgacactatctatgcgcttcgattcagtagagatggggaaatctta
gcatcaggttcaatggataacacagttcggctgtgggatgccgtgaaagcatttgaggat
ttagaaactgatgactttactaccgccactggacatataaacttgcctgaaaactcacag
gacttattactaggtacatacatgaccaaatcaaccccagttgtacaccttcattttacc
cgcagaaacttgctactagctgcaggagcctacagttcacagtaa
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