KEGG   Anas platyrhynchos (mallard): 101789948
Entry
101789948         CDS       T02816                                 
Symbol
EXOSC2
Name
(RefSeq) exosome complex component RRP4
  KO
K03679  exosome complex component RRP4
Organism
apla  Anas platyrhynchos (mallard)
Pathway
apla03018  RNA degradation
Brite
KEGG Orthology (KO) [BR:apla00001]
 09120 Genetic Information Processing
  09123 Folding, sorting and degradation
   03018 RNA degradation
    101789948 (EXOSC2)
 09180 Brite Hierarchies
  09182 Protein families: genetic information processing
   03019 Messenger RNA biogenesis [BR:apla03019]
    101789948 (EXOSC2)
Messenger RNA biogenesis [BR:apla03019]
 Eukaryotic type
  mRNA degradation factors
   3'-5' decay
    Core exosome factors
     101789948 (EXOSC2)
 Prokaryotic type
  Archeal mRNA degradation factors
   Exosome components
    Core exosome
     101789948 (EXOSC2)
SSDB
Motif
Pfam: RRP4_S1 KH_6 ECR1_N EXOSC1 RRP40_S1
Other DBs
NCBI-GeneID: 101789948
NCBI-ProteinID: XP_005013350
Ensembl: ENSAPLG00000012516
LinkDB
Position
18:complement(7822841..7828205)
AA seq 294 aa
MAAVTMRLPVARKVVAPSGSRGEEKHLVAPGDTITTDTGYMRGHGTYVDEEKLIASVAGA
VERVNKLVCVKALKTRYNGEVGDIVVGRITEVQQKRWKVETNSRLDSVLLLSSMNLPGGE
LRRRSAEDELAMRDYLQEGDLISAEVQSVFSDGAVSLHTRSLKYGKLGQGVLVQVSPSLV
KRQKTHFHDLPCGASVILGNNGFIWIYPTTEQKDEEAGGFTTNLEPVPLSDREVISRLRN
CIVALATQKMMLFDTSILYCYEASLSHQIKDILKPEVMEEIVLETRQRLLDLEG
NT seq 885 nt   +upstreamnt  +downstreamnt
atggcggcggtcaccatgaggctgccggtggcccgcaaggtggtggcgccgagcgggtcg
cggggcgaggagaagcacctggtggcgccgggggacaccatcaccacggacacgggctac
atgaggggccatggcacctacgtggatgaggagaagctgatcgcctcggtggccggtgct
gtggagagggtgaacaagctggtgtgcgtcaaggcgctgaagaccaggtacaacggtgaa
gtcggcgacatcgtggttggcaggatcacggaggttcagcagaaacgatggaaagtggaa
accaattccaggctagattcagtcttgttgctgtcatctatgaatttacctggtggggaa
ctgagaaggagatcggcagaagacgagcttgcaatgagggactatctgcaggaaggggat
ctcatcagtgcagaggtccagtctgtgttctctgatggggctgtatcgctgcacacccgg
agtctgaaatacgggaagcttggccagggtgtgctcgttcaggtctcgccctcccttgtg
aaacgccagaagactcacttccatgacttgccctgtggtgcatccgtgatcctcggcaac
aacggtttcatctggatctacccaaccactgagcagaaagatgaagaggcagggggcttc
accaccaacttagagccagttcccttgtctgaccgggaggtgatctcacggcttcgaaac
tgcattgtggctctggctactcagaagatgatgctctttgacaccagcatcctgtattgc
tatgaggcatccctttctcatcagatcaaggatattctcaaaccagaggtgatggaggag
attgttctggaaacccggcagaggctgttggatctggagggatag

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