Anas platyrhynchos (mallard): 101789948
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Entry
101789948 CDS
T02816
Symbol
EXOSC2
Name
(RefSeq) exosome complex component RRP4
KO
K03679
exosome complex component RRP4
Organism
apla
Anas platyrhynchos (mallard)
Pathway
apla03018
RNA degradation
Brite
KEGG Orthology (KO) [BR:
apla00001
]
09120 Genetic Information Processing
09123 Folding, sorting and degradation
03018 RNA degradation
101789948 (EXOSC2)
09180 Brite Hierarchies
09182 Protein families: genetic information processing
03019 Messenger RNA biogenesis [BR:
apla03019
]
101789948 (EXOSC2)
Messenger RNA biogenesis [BR:
apla03019
]
Eukaryotic type
mRNA degradation factors
3'-5' decay
Core exosome factors
101789948 (EXOSC2)
Prokaryotic type
Archeal mRNA degradation factors
Exosome components
Core exosome
101789948 (EXOSC2)
BRITE hierarchy
SSDB
Ortholog
Paralog
Gene cluster
GFIT
Motif
Pfam:
RRP4_S1
KH_6
ECR1_N
EXOSC1
RRP40_S1
Motif
Other DBs
NCBI-GeneID:
101789948
NCBI-ProteinID:
XP_005013350
Ensembl:
ENSAPLG00000012516
LinkDB
All DBs
Position
18:complement(7822841..7828205)
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AA seq
294 aa
AA seq
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MAAVTMRLPVARKVVAPSGSRGEEKHLVAPGDTITTDTGYMRGHGTYVDEEKLIASVAGA
VERVNKLVCVKALKTRYNGEVGDIVVGRITEVQQKRWKVETNSRLDSVLLLSSMNLPGGE
LRRRSAEDELAMRDYLQEGDLISAEVQSVFSDGAVSLHTRSLKYGKLGQGVLVQVSPSLV
KRQKTHFHDLPCGASVILGNNGFIWIYPTTEQKDEEAGGFTTNLEPVPLSDREVISRLRN
CIVALATQKMMLFDTSILYCYEASLSHQIKDILKPEVMEEIVLETRQRLLDLEG
NT seq
885 nt
NT seq
+upstream
nt +downstream
nt
atggcggcggtcaccatgaggctgccggtggcccgcaaggtggtggcgccgagcgggtcg
cggggcgaggagaagcacctggtggcgccgggggacaccatcaccacggacacgggctac
atgaggggccatggcacctacgtggatgaggagaagctgatcgcctcggtggccggtgct
gtggagagggtgaacaagctggtgtgcgtcaaggcgctgaagaccaggtacaacggtgaa
gtcggcgacatcgtggttggcaggatcacggaggttcagcagaaacgatggaaagtggaa
accaattccaggctagattcagtcttgttgctgtcatctatgaatttacctggtggggaa
ctgagaaggagatcggcagaagacgagcttgcaatgagggactatctgcaggaaggggat
ctcatcagtgcagaggtccagtctgtgttctctgatggggctgtatcgctgcacacccgg
agtctgaaatacgggaagcttggccagggtgtgctcgttcaggtctcgccctcccttgtg
aaacgccagaagactcacttccatgacttgccctgtggtgcatccgtgatcctcggcaac
aacggtttcatctggatctacccaaccactgagcagaaagatgaagaggcagggggcttc
accaccaacttagagccagttcccttgtctgaccgggaggtgatctcacggcttcgaaac
tgcattgtggctctggctactcagaagatgatgctctttgacaccagcatcctgtattgc
tatgaggcatccctttctcatcagatcaaggatattctcaaaccagaggtgatggaggag
attgttctggaaacccggcagaggctgttggatctggagggatag
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integrated database retrieval system