Anas platyrhynchos (mallard): 101790781
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Entry
101790781 CDS
T02816
Symbol
NPHP4
Name
(RefSeq) LOW QUALITY PROTEIN: nephrocystin-4
KO
K16478
nephrocystin-4
Organism
apla
Anas platyrhynchos (mallard)
Brite
KEGG Orthology (KO) [BR:
apla00001
]
09180 Brite Hierarchies
09183 Protein families: signaling and cellular processes
03037 Cilium and associated proteins [BR:
apla03037
]
101790781 (NPHP4)
Cilium and associated proteins [BR:
apla03037
]
Primary cilia and associated proteins
Nephronophthisis-related proteins
101790781 (NPHP4)
SSDB
Ortholog
Paralog
GFIT
Motif
Pfam:
NPHP4_C2_3rd
NPHP4_C2_2nd
Ig_NPHP4_1st
Ig_NPHP4_4th
Ig_NPHP4_2nd
Ig_NPH4_3rd
NPHP4_SK
Motif
Other DBs
NCBI-GeneID:
101790781
NCBI-ProteinID:
XP_038022444
Ensembl:
ENSAPLG00000002485
LinkDB
All DBs
Position
22
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AA seq
1413 aa
AA seq
DB search
MSEWERIFLQNLAVPPHSQRRRNIPKESTAFQCVLKYLEGTVVTQQAAGGSAAVEFQLRL
SLFDVTYHHFFGRTWRSSARTPRSAPQQRPRVVFNEAVYFHTSLNHPSITAVVEVVATAQ
TPEGLSRDLSCGFGLIPLFDSRWDPTDLAAKDRVLKLYHGTPRALLHPLFQDPVEKNKYM
TIMENSHLQYTLKPHPPLETIFHLLPENLLVSGLQKIPGLLPAHGDTSDCFLKPRLMKSV
TCYLDKLSIRLYPSLEKFEEELLELLNSDRLLKVSTRPAGSTLWVQERRLRVGVHNGLRF
VQAPQVAVLLPTADVARGRPDGPTASATGQALLLRSRLQLSEMVPHPAFGVCFQLEYVVC
AGASSKAEAGSALGPAADMHAVRWALWSPFLGTDSSPVVLPLRGGARRSPGQALVFRAPA
DSESSEEVKQVASGTVQFHVSTDSEENLATSTDTSSKARKESEKPPTPSLSSPSLLRPAT
SPRGPGLSLSELSASPRSSNAPVPAAPRDTTGHPHAQSPRHCSFRACRALARGWIKHLEA
DLQPGSPDPSGSEQLRELPFTPAQPPIAAVGLPAGSSSTVLSRASLALLHASGFPEILDC
NKEPVEIAEPLDFTSFSPQLEEADALQSNEIILQFLAFSRAPQDGVEGTWPRTVFLTFQF
YHFPPVTTPRLQLVDMDSEKAARAAAPPQLLVQINKDGTARTGAPGLQLKYMVDPAFLKP
GEQRWFVRYLADHSLQLDVWDGDSLLLVGSAAVKLKPLLRQGRPAVRTLHELEVATTEYE
QDAVAAGRDTLWHGAVRPVDVRVAVRGHLHLCLANVGHPCEETPRIPRRPSPSRTRLVPS
LDSAGSLQGGSLLSLHTRSGPRVSRARRLAEVDGELAATLCRRRPEASPGSPRAPHEAAD
VRRRKLRRMALVRQQEEASGSTPQHTGRHEQRLQHLRDLQVIDAYRERTKSESITQMLSQ
AITTTHTVYAVLGTAEFFEFALKNPYSVQHTVTIEVDHPELSVILDPREWRHFKELTKAA
TPLEEDMFHLRDDLRPQVYLRPKETVHIPFRYQTFSAEPAVAAVPGPAGLSAGDDAATTS
WQPGALQTKHIQVAFRVSGGKPIALLRVKVEPRPHVVDQTFRFYHPELTFLKKTIRLPPW
HTLPGAPAGMPGGEPEMYVRCSDPNIICETKNMGPGEPQDVFLKVAGGPSPQIKKFFVAI
YTDAWLAAPLRIWQFYLHSLQRLDVSCTAGQLARLALPLRGTRALRKVKAFSSHPHELKV
DPEGVFVLPPNGVLDLYVGVRPRRAGSRFIYLNLVDVEYHQLVSSWLVCVSCRQPLISKA
FEITLPAGGGKGSNKRITYTNPYPTRRLYFLGTSRPDLLQFKEDSFEVAGGEVYTIGLRF
APSQSTGEEEILIHINDHEDKNEETFCVKVVYQ
NT seq
4242 nt
NT seq
+upstream
nt +downstream
nt
atgagcgagtgggaaaggatttttctgcaaaacctcgccgttcctccccactcccagcgg
aggcggaatatcccgaaggagtcaacggcttttcagtgcgtcctgaagtacctcgagggg
actgttgtcacgcagcaagcagcgggtggctcggcggccgtggagttccagctgcgcctg
tccctgttcgatgtcacctatcaccacttcttcggccggacctggcggagcagtgccagg
accccacgcagcgccccgcagcagcgccccagggtggtgttcaacgaggccgtttacttc
cacacctcgctgaaccaccccagcatcacggctgtggtggaggtggtggcgacagcccag
acaccggaggggctctcccgggatctgtcgtgtggctttgggctcatccccctgtttgac
agcaggtgggatcccacggacctggccgccaaggacagagtactcaagctgtaccacggg
acaccgcgtgccttactgcacccacttttccaggaccctgtagaaaagaacaagtacatg
acgataatggagaacagccacctgcagtacaccctgaagccccacccgcccctggagacg
atatttcacctcctgcctgaaaaccttctggtgtctgggctgcagaaaatccctggcttg
ctccctgcgcacggagacacaagtgactgctttctgaaaccgcgtctcatgaagtcggtc
acctgctacctggacaaactctccatcaggctgtacccttctctggagaaattcgaggag
gagctgctggagttactgaacagtgaccgcttgcttaaggtgagcacccggcctgctggc
agcacgctgtgggtgcaggagcggcggctgcgtgtcggtgtccacaacggcctgcgcttc
gtccaggcgccacaggtggctgtgctgctgccaacagcagatgtggcccgcggccggccc
gacggccccacagccagtgccacgggccaggccttgctcctgaggagccgcctgcagctg
agcgagatggttccgcacccagccttcggggtctgcttccagctggagtacgtcgtctgc
gctggggccagcagcaaggctgaggctggcagcgccctgggcccagcagccgacatgcac
gcggtgcggtgggcgctctggagccccttcctgggcaccgattcctccccggtggtgctg
cccctgcgtggtggtgcccgccgcagccccggccaggccttggtcttcagggcccctgcc
gacagcgagagctccgaggaggtgaagcaagttgcctctggtactgtccaattccacgtt
tccaccgattcagaagaaaatcttgcaacttcaacagatacctcaagtaaagccaggaaa
gagtcagagaagcctcctacaccatctctgagttcgccctccctgctgcgcccagcgacc
tccccgcggggaccagggttgtctctctcggagctctcggcctcgccgcggagcagcaac
gccccggtacccgcggccccgcgggacaccacgggacacccgcacgctcagagcccccgg
cactgctcattccgagcctgccgtgccctggcacgtggctggatcaagcacctggaggct
gacctgcagcccggatccccggacccctccggcagtgagcagctgcgggagctgcccttc
acgcccgcccagccacccatcgcggccgtggggctgccggcaggcagttccagcaccgtg
ctctcccgtgcgtccctggcgctcctgcacgcctctggctttccagagatcctggactgc
aacaaggagcctgtggagattgcagagcccctggacttcaccagcttcagtcctcagctg
gaggaagctgatgctctgcagagcaatgaaataatcctgcagttccttgctttcagtagg
gctcctcaggatggagtggaagggacgtggcccaggaccgtgttcctcaccttccagttc
taccatttcccaccagtcaccacaccacgtctgcagctggttgacatggacagcgagaag
gcagccagggcagccgcaccgcctcagctccttgtccagatcaacaaagatggcactgca
cgcaccggagctccaggactgcagctgaagtacatggtggatcctgcgttcctgaagcct
ggggaacagcgctggtttgtgcgctacctggctgaccacagccttcagcttgacgtctgg
gatggagactctttgcttcttgttgggtctgccgcagttaaattgaagcccctgctgcgc
cagggccggccggccgtcaggaccctccacgagctggaggtggcgaccacagagtacgag
caggatgcggtggcagcgggcagggacacgctgtggcacggagcggtgcggcccgtggac
gtccgcgtggcagtgaggggtcacctccacctctgcctggccaacgtgggccacccctgt
gaggagaccccaaggatcccgaggcgcccatcaccatcccgtacccgcctggtgccctct
ctggacagcgctggcagcctgcagggtggcagcttgctgtccctgcacacccgcagcggt
ccaagggtgtctcgggcacgcaggctggccgaggtggatggcgagctggcagccacgctc
tgtcgccgccggccagaggccagcccgggctccccacgtgccccccacgaggctgcagac
gtccgacggcgcaagctgcggcgcatggcactggtgcggcagcaggaggaggccagtggg
agcacgccccagcacacgggccggcacgagcagcgcctgcagcacttgcgggacctgcag
gtgatcgatgcctaccgggagcgcaccaagagcgagagcatcacccagatgctgagccag
gccatcaccaccactcacactgtctatgctgtgctggggacggctgagttcttcgagttt
gctctgaagaacccctacagcgtccagcacacagtgacgatcgaggttgaccaccctgag
ctcagtgtcatactggacccgagggagtggcggcacttcaaggagctgacgaaggcagct
acaccgctggaggaggacatgttccaccttcgtgatgaccttaggccccaggtctacctg
cgtcccaaggagaccgtccacatcccgttcagataccagacgttctcggcagagccggct
gtcgcggcggtgccggggccggcggggctgagcgccggggacgatgcagccaccacctcc
tggcagcctggggccctgcagacgaagcacatccaggttgctttccgtgtgagcgggggg
aagcccatcgcgctgctgagggtgaaggtggagccccgtccccacgtggtggatcagacc
ttcaggttctaccaccccgagctcaccttcctgaagaagaccatccggctgccgccctgg
cacacgctgccaggagctccggcagggatgccgggtggggagccggagatgtatgttcgc
tgcagtgaccctaacataatttgtgaaaccaaaaatatgggtcccggggagccacaggac
gtcttcttaaaagtagctggaggaccaagcccgcagatcaaaaaattctttgttgctatt
tatacggacgcctggctggctgcaccactgcgcatctggcagttctacctgcactccctg
cagcgcctggacgtcagctgcaccgccgggcagctcgcccgcctcgccctgcctctgcgc
ggcacgcgggcgctccgcaaggtgaaggcgttctcctcgcatccccacgagctgaaggtg
gatcccgaaggagtgtttgttctgcccccgaacggcgtcctggacctgtatgtcggcgtg
aggcctcggagggctggcagcaggttcatctacctcaacctggtggacgtggagtaccac
cagctggtgtcctcctggctggtctgcgtctcctgcaggcagcctctcatttccaaggcg
tttgagataacgctccccgcgggcggcgggaagggctccaacaagcgcatcacctacacc
aacccctaccccacgcggaggctgtacttcctgggcaccagccgccccgacctgctgcag
ttcaaggaggactccttcgaggttgccggcggggaggtatacaccatcggcttgcggttc
gccccgagccagagcacaggtgaggaggagatcctgatccacatcaacgaccacgaggac
aagaacgaggaaaccttctgtgtgaaggttgtgtaccagtga
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integrated database retrieval system
