Anas platyrhynchos (mallard): 101791062
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Entry
101791062 CDS
T02816
Symbol
CNOT2
Name
(RefSeq) CCR4-NOT transcription complex subunit 2 isoform X2
KO
K12605
CCR4-NOT transcription complex subunit 2
Organism
apla
Anas platyrhynchos (mallard)
Pathway
apla03018
RNA degradation
Brite
KEGG Orthology (KO) [BR:
apla00001
]
09120 Genetic Information Processing
09123 Folding, sorting and degradation
03018 RNA degradation
101791062 (CNOT2)
09180 Brite Hierarchies
09182 Protein families: genetic information processing
03019 Messenger RNA biogenesis [BR:
apla03019
]
101791062 (CNOT2)
Messenger RNA biogenesis [BR:
apla03019
]
Eukaryotic type
mRNA surveillance and transport factors
mRNA cycle factors
P-body specific factors
101791062 (CNOT2)
mRNA degradation factors
3'-5' decay
Ccr4-NOT complex
101791062 (CNOT2)
BRITE hierarchy
SSDB
Ortholog
Paralog
Gene cluster
GFIT
Motif
Pfam:
NOT2_3_5_C
Motif
Other DBs
NCBI-GeneID:
101791062
NCBI-ProteinID:
XP_027311439
Ensembl:
ENSAPLG00000012657
EnsemblRapid:
ENSAPLG00030006187
LinkDB
All DBs
Position
1:37889820..37974944
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AA seq
536 aa
AA seq
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MFGASRKKFVEGVDGDYHDENMYYSQSSMFPHRSEKDAMLQKWILGWDFKRRKMLASPST
SGQLSQFGASLYGQQSALGLPMRGMSNNTPQLNRSLSQGTQLPSHVTPTTGVPTMSLHTP
PSPSRGILPMNPRNMMNHSQVGQGIGIPSRTNSMSSSGLGSPNRSSPSIICMPKQQPSRQ
PFTVNSMSGFGMNRNQAFGMNNSLSSNIFNGTDGSENVTGLDLSDFPALADRNRREGSGN
PTPLINPLAGRAPYVGMVTKPASEQSQDFSIHNEDFPALPGSSYKDPTSSNDDNKSNLNT
SGKTSSSTDGPKFPGDKSSTTQNNNQQKKGIQVLPDGRVTNIPQGMVTDQFGMIGLLTFI
RAAETDPGMVHLALGSDLTTLGLNLNSPENLYPKFASPWASSPCRPQDIDFHVPSEYLTN
IHIRDKLAAIKLGRYGEDLLFYLYYMNGGDVLQLLAAVELFNRDWRYHKEERVWITRAPG
MEPTMKTNTYERGTYYFFDCLNWRKVAKEFHLEYDKLEERPHLPSTFNYNPAQQAF
NT seq
1611 nt
NT seq
+upstream
nt +downstream
nt
atgtttggtgcttcaaggaagaagtttgtagagggggttgatggtgactaccatgatgaa
aacatgtactacagccaatcatcgatgttcccacatcggtcagaaaaagatgcaatgttg
cagaagtggatcttaggatgggacttcaagagaaggaagatgctggcatcaccatcaaca
tcaggtcagctgtctcagtttggggcaagtttatacgggcaacaaagtgcactaggcctt
ccaatgaggggaatgagcaacaatacccctcagttaaatcgcagcttatcacaaggcact
cagttaccgagccacgtaacgccaacaacaggggtaccaacaatgtcacttcacacgcct
ccatctccgagcagggggatattgcctatgaatcctaggaatatgatgaaccactcccag
gttggtcagggcattggaattcccagcaggacaaacagcatgagcagttcagggttaggc
agccccaacagaagctctccaagcataatatgtatgccaaagcagcaaccctctcgacaa
ccttttactgtgaacagtatgtctggatttgggatgaacagaaatcaggcgttcggaatg
aataactccttatcaagtaacatttttaatggaacagatggaagtgaaaatgtgacaggg
ctggacctctcagattttccagcgctagcagacagaaacagaagggaaggaagtggcaat
ccaactccattaataaaccctttagctggaagggctccctatgttggaatggtaacaaaa
ccagcaagtgagcagtcccaggacttttcaatacacaatgaagattttccagcattacca
ggctccagctacaaagacccaacatcaagtaatgatgacaataaatctaatttgaataca
tcaggcaaaacatcatccagcacagatgggcccaagtttcctggagataaaagttcaact
acgcaaaacaacaaccagcagaaaaaagggatccaggtgttacctgacggtcgggttacc
aacattcctcaagggatggtgacggaccagtttggaatgattggcttgttaacattcatc
agggcagcagagacagatccaggaatggtacatcttgcattaggaagtgatttaacaaca
ctaggtctcaatctcaactctcctgaaaatctttatcccaaatttgcatcaccctgggca
tcatcaccttgtcgacctcaagacatagacttccatgttccatctgaatacttaactaac
attcacattagggataagctggctgcaataaaacttggccgatatggagaagatctcctg
ttttatctctattacatgaatggaggagatgtattacagctattagcagcagtagagcta
tttaaccgagattggagataccacaaagaagaacgagtatggatcaccagggcacccggc
atggagccaacaatgaaaaccaatacatacgagaggggaacatattacttctttgactgt
cttaactggaggaaagtagctaaggagttccatctggaatatgacaaattagaagaaagg
cctcatctgccatcaaccttcaactacaaccctgctcagcaagccttctaa
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