Anas platyrhynchos (mallard): 101791194
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Entry
101791194 CDS
T02816
Symbol
SHOC1
Name
(RefSeq) protein shortage in chiasmata 1 ortholog isoform X1
KO
K28108
shortage in chiasmata 1
Organism
apla
Anas platyrhynchos (mallard)
Brite
KEGG Orthology (KO) [BR:
apla00001
]
09180 Brite Hierarchies
09182 Protein families: genetic information processing
03036 Chromosome and associated proteins [BR:
apla03036
]
101791194 (SHOC1)
Chromosome and associated proteins [BR:
apla03036
]
Eukaryotic type
Meiosis-specific proteins
Others
101791194 (SHOC1)
BRITE hierarchy
SSDB
Ortholog
Paralog
Gene cluster
GFIT
Motif
Pfam:
DUF5587
Motif
Other DBs
NCBI-GeneID:
101791194
NCBI-ProteinID:
XP_038027110
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Position
Z:complement(74045345..74096955)
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AA seq
760 aa
AA seq
DB search
MFTALKYHGTDYLYESMARQKFSICRLSLCFPPCLQQHEKCHLTGLFADDKYRKPWTRVT
STQNTIAISVLDQWKKSLSVEDFLEKKPITSLEFHSNNELIEVVPSSNPCSQTDTEELYL
LKKDICMEGSTQDKYLKADFASELKEQWQDLQVGDELIFVDNLENYHKKLPHSSALLDRL
KFFSVRDPLSDSGGQNLREENIFRELLTFQKEMEMQESKKELQAIKEMFCTITLKDEEYF
VLPVELEFCKTSNSRSDSIKTPSYMELKELLNVAPETMADEDKCGEVVKEDVKAEISNKI
EVSKYCPIPGELCSSNSTSMLESCESAKHVSYLQDEIEVPLTPLCRQQRSQVNFMCVGLQ
EEPIPLSDNSVFITEPSREYLECLVWQSEKYRDNVSSLLLVEHQTFKLAYQHHSLTELKK
VLSIDIEAPMLTSLEEDWWIHMGLHPVCVDTLELLNMDSRNTSSLLPTEVETFTQFKSYQ
LERWLEEKNSMTNQELFSAKRHQLDQVTNGTLPINAASSVKIDSTSTSVEEFDGGSIQKS
KVEEKIYFLNQGKKTFKSLEAVSPEDVSFKEDNSSEAQKPASFPQATKWDNDDSDLSNFI
MLRSKHTITQREEENDVDSPEKVQQPKEQHLPDHKEEISVCEPVRAEKEENESSITAEIQ
ASESQYQAYCLLEGAAAPILKDLTHLGVLASISWSFDSIKFDHTRFFLKQQEKVICDRFK
EGKVDEKEIMLFRHAALVHLLVTVRDLLLTCGLDTALGLF
NT seq
2283 nt
NT seq
+upstream
nt +downstream
nt
atgttcacagctttaaagtatcacggaacagactatttatatgagagcatggcgaggcag
aagttttccatctgtagattatcactctgctttcctccctgtttgcaacaacatgaaaag
tgtcatctgactggactctttgctgatgacaagtacaggaagccatggactagagttaca
tcaacacagaacacaattgctatttcagtgttggatcaatggaagaaaagtttatctgtg
gaggatttcctggaaaagaaacctatcacttctctagagttccatagtaataatgaattg
atagaagttgttccaagttcaaatccctgctctcagactgacacagaagaactttattta
ctcaagaaggatatctgtatggaaggatcaactcaagacaaatatttgaaggctgacttt
gcctctgaacttaaagaacaatggcaagatttacaggttggagacgaacttatttttgtt
gataatcttgaaaactatcataaaaaacttccacattcatctgcacttctggatagatta
aaatttttttcagtgagagatcctctttcagattctggaggacagaatttaagagaagag
aacatttttagggaactcttgacttttcaaaaggaaatggagatgcaggagagtaaaaaa
gaattgcaggcaattaaagagatgttctgtacaataactttaaaagatgaagagtatttt
gtgttgcctgtcgagttagaattctgtaaaaccagcaacagcagatcagattccattaag
actccatcatatatggaactgaaagagctgttaaatgtagctccagaaactatggctgat
gaagacaagtgtggagaggtggtcaaagaagatgttaaagcagaaatttcaaacaaaatt
gaagtttccaaatactgtcccataccgggagagctttgctccagtaacagcacaagtatg
ttggaatcctgtgagtcagctaaacatgtttcatatctgcaagatgaaatagaagtacct
ttaactcctttgtgcagacaacaaagatcacaggtgaattttatgtgtgtaggacttcaa
gaagaacctattcctctttctgataacagtgtttttattacagagccctctagagaatac
ttagaatgcttggtatggcaatcagagaaatatcgggacaatgtgagctctcttttgctt
gtcgagcatcagacctttaaactcgcatatcagcatcattcactcacggaactgaagaaa
gtgctatcaattgatatagaagcaccgatgcttacctctctagaggaggactggtggatt
catatgggattacatcctgtctgtgttgatacattggagctattaaatatggattccagg
aatacaagcagtttgcttcctacagaagtagaaacattcacgcaatttaaatcatatcaa
ctagaacgatggcttgaagagaagaattccatgacaaatcaggagttgttttctgccaaa
agacatcagttggaccaagtaactaatgggaccttgcctataaatgctgcatcttccgtc
aaaatagacagtacaagtacctctgtagaagagtttgatggaggaagcatacaaaagagt
aaagtagaagagaaaatttatttcttaaaccaaggaaagaagacattcaaatcacttgaa
gcagtcagccctgaagatgtatcttttaaagaagacaactcttctgaggctcagaagcct
gcatcattcccacaagctacaaaatgggacaatgatgattctgatctgagcaactttatc
atgctgagatctaaacacacaatcactcaaagagaggaagaaaatgatgtagatagtcct
gaaaaagtgcaacaacccaaagagcagcatttacctgatcacaaagaggagatttctgtg
tgtgagcctgtaagagcagagaaagaagagaatgagagcagcatcacagctgaaattcaa
gcatcagaaagccaataccaggcatactgtctgttggaaggagcagccgcccctatttta
aaagatttgacacatcttggtgttcttgcttctataagttggagctttgacagcataaaa
tttgatcacacaaggtttttcttaaaacagcaggagaaagtgatatgcgatcgttttaaa
gaaggtaaagtagatgagaaagagatcatgctgttcagacatgctgctctggtgcatcta
ttggtgacagttcgagaccttctattaacgtgtggcttggacacagcactaggtttgttt
taa
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