Anas platyrhynchos (mallard): 101791622
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Entry
101791622 CDS
T02816
Symbol
RFC1
Name
(RefSeq) replication factor C subunit 1
KO
K10754
replication factor C subunit 1
Organism
apla
Anas platyrhynchos (mallard)
Pathway
apla03030
DNA replication
apla03410
Base excision repair
apla03420
Nucleotide excision repair
apla03430
Mismatch repair
Brite
KEGG Orthology (KO) [BR:
apla00001
]
09120 Genetic Information Processing
09124 Replication and repair
03030 DNA replication
101791622 (RFC1)
03410 Base excision repair
101791622 (RFC1)
03420 Nucleotide excision repair
101791622 (RFC1)
03430 Mismatch repair
101791622 (RFC1)
09180 Brite Hierarchies
09182 Protein families: genetic information processing
03032 DNA replication proteins [BR:
apla03032
]
101791622 (RFC1)
03400 DNA repair and recombination proteins [BR:
apla03400
]
101791622 (RFC1)
DNA replication proteins [BR:
apla03032
]
Eukaryotic type
DNA Replication Elongation Factors
RFC (replication factor C)
101791622 (RFC1)
DNA repair and recombination proteins [BR:
apla03400
]
Eukaryotic type
SSBR (single strand breaks repair)
MMR (mismatch excision repair)
RFC (replication factor C)
101791622 (RFC1)
BRITE hierarchy
SSDB
Ortholog
Paralog
Gene cluster
GFIT
Motif
Pfam:
RFC1
BRCT
AAA
PTCB-BRCT
AAA_22
AAA_14
Rad17
AAA_30
BRCT_2
AAA_5
RNA_helicase
RuvB_N
AAA_17
TIP49
AAA_16
nSTAND3
AAA_33
AAA_7
AAA_18
AAA_19
NTPase_1
Motif
Other DBs
NCBI-GeneID:
101791622
NCBI-ProteinID:
NP_001297313
Ensembl:
ENSAPLG00000010594
UniProt:
Q90238
LinkDB
All DBs
Position
4:52653110..52696250
Genome browser
AA seq
1145 aa
AA seq
DB search
MDIRKFFGVVPPGKRQECENVKKSDKIKNGEGDSSGKKRGKETKVKNSPSEDVPKQKQTN
KKKRIIYDSDSEEEVQSVKKSKKPSEKKAATSKLGEVLKQHPVVYVSGTDDDDDFVNKRI
SLKPKENGGSAISCPGSTTVKKEDVKPRAKPKPLSPVKLTPTSALDYFGTSSVQRSEKKL
VASKRKEPSQSRDSTVGDEAIARQLQLEEDSELERQLHEDEEFAKTLAMLDETPQKKKAR
RDSEEQTVLSIKSSPNVTEGYKQSQRVKATNSAGEAKQTKSENSKGSHLPPQSTDSKLAE
KSTDKTLPLKPTSKLVALKRKEEIAEKERGTQSSVSKEKPQGKEEKKTPKKEKISPKKAE
SVIPEDSEKKRNNYQAYRSFLNREGPKALGSKEIPQGAENCLEGLTFVITGVLESIERDE
AKSLIERYGGKVTGNVSKKTNYLVMGRDCGQSKCEKASALGTKIIDEDGLFDLVRTMPGK
KSKYELAAESEAKKTESRHKKTPQKTEASRKSFSPLKREADIKKRNSTPEKGATFKSVKK
ETAAVRKLTDFKQQAVEKKEVPEPKGNLVSESNENGTERLLWVDKYKPTSLKAIIGQQGE
QSCANKLLRWLRNWHKNTSEDGQAKASKLGGKDDGISSKAALLSGPPGVGKTTTAALVCK
ELGYSYVELNASDTRSKNSLKEVVAESLNNTSIKDFCSGTSSSVSGKHVLIMDEVDGMAG
NEDRGGIQELISLIKHTKIPIICMCNDRNHPKIRSLVHYCFDLRFQRPRLEQIKGAMMSI
AFKEGLKIPPPAMHEIILAANQDIRQVLHNLNMWCAKDKSLTYDEAKTDASRAKKDIKLG
PFDVVRKVFAAGEEASRMSLIDKSDLFFHDYSLAPLFVQENYVHVKTAAAGGDLKKHLML
LSRAADSICDGDLVDRQIRSKQNWNLLPTQAIYSSVLPGELMRGYMSQFPVFPSWLGKFS
STGKHERIVQELAMHMSLRTQMCKRTVNMEYLSYLRDALVQPLKDFGADGVQQAITFMDS
YCLMKEDVENIMEISMWGGKPSPFSKLDSKVKAAFTRAYNKEAHLTPYSLNSVKTSKRQS
ASMATSELSEDLNVDETQSDEDEQDSVESDAMIKQKKAKSSKLPKREKNDEPTKKEGKRK
EKTRH
NT seq
3438 nt
NT seq
+upstream
nt +downstream
nt
atggatatccggaaattctttggcgttgtaccccctgggaagcgacaagaatgcgagaat
gtgaaaaagagtgacaaaataaaaaatggggaaggagactcgagtgggaaaaagagggga
aaagagactaaggtgaagaattcacccagtgaagatgttcccaaacaaaagcagacaaac
aagaaaaaaagaataatctatgattcagattcagaagaggaggtgcagtcagtgaaaaag
tccaagaagccatcagagaaaaaagcagccacttcaaaacttggtgaagttctaaagcag
catcctgttgtttatgtttcagggacagatgatgatgatgactttgtcaataagagaatt
tccctgaaaccaaaggagaatgggggatcagccatcagttgcccaggatcaacaacagtg
aaaaaggaagatgtaaaaccacgagctaaacccaagccattatctccagtgaagctgacg
cccacctcagctctcgattactttgggacaagtagtgtccagcgatcagaaaagaaactg
gtagcaagtaaaaggaaggaaccctcacaaagcagggacagcacagtgggcgatgaagcc
attgctaggcaactgcagcttgaagaagattcagagctggagagacagttgcatgaagat
gaagaatttgctaagactttggccatgttggatgaaacaccacagaagaagaaggctcgg
agggattcagaagagcagacagtactgagcatcaagagcagtcctaatgtgacagaggga
tacaagcaatctcagagagtgaaagcaacaaactctgcaggtgaagcaaaacaaactaaa
tctgaaaactcaaaagggtcccatttacccccacaatcaactgatagtaaactagcagaa
aagtcaactgataagacgttgcctttgaagcctacctctaagcttgtggctctgaaacga
aaagaagagattgctgaaaaggaaagaggcactcaaagttcagtatcaaaagaaaaacct
cagggaaaagaagagaagaaaacaccaaagaaggagaaaatttctccgaagaaggctgag
tctgtaattcctgaggactctgaaaagaagcgaaacaattatcaagcctaccgaagcttc
cttaatcgcgagggtccaaaagctctgggttccaaagagatacctcaaggagctgaaaac
tgcttggaaggcctgacattcgtaattacaggagttctggagtctattgaaagagatgag
gccaaatctctgattgaacgttatggaggaaaagtaactgggaatgtcagcaagaagaca
aactacctggttatgggacgagactgtggccaatctaaatgtgaaaaggcatctgcttta
gggacaaaaattattgatgaagatggcctatttgatcttgttcgaactatgccaggcaag
aagtccaaatacgagctggcagctgaatcagaggcaaagaaaacagagtcgagacataaa
aagacaccacagaaaactgaagctagcagaaagagttttagccccctcaaaagggaagct
gatattaaaaaaagaaattctactcctgagaagggagctaccttcaaatctgttaagaaa
gaaactgctgctgttcgaaagcttacagactttaaacagcaagcagtggagaagaaagaa
gtcccagaacctaaggggaacttggtctctgagagtaatgaaaacggaacagagagattg
ctatgggtggataaatacaagcctacgtctctcaaggcaatcattggacagcagggtgag
caaagctgtgccaacaaacttctccgatggctccgaaactggcacaagaatacctcagaa
gatggacaagcaaaggccagcaaacttggaggcaaagatgatggtattagctctaaagca
gcattactttctggtccacctggagttggtaaaaccactacagctgctttagtttgtaag
gaactggggtatagctacgtggagctgaatgccagtgacactcggagtaagaacagtcta
aaggaagtagttgctgaatcgcttaacaacaccagcatcaaagacttctgttctggcaca
tcctcatcagttagtgggaaacatgtattgatcatggatgaagtggatggtatggcaggc
aatgaagacagaggagggattcaggagttgatcagtttgattaaacacacaaaaataccc
atcatctgcatgtgtaatgatcgaaaccatcctaaaattcgttccttggtccactactgt
tttgatcttcgttttcagagacctcgtctagagcagattaagggtgccatgatgtctatt
gcgtttaaagaaggcttaaaaattccaccacctgctatgcatgagataatcctggcagca
aatcaagacatcagacaggttttacataatcttaatatgtggtgtgcaaaagataaatca
ttgacttatgatgaagccaaaacagatgccagcagagctaagaaggatatcaaactgggc
ccttttgacgttgtccggaaggtttttgctgctggagaggaggcttcccgtatgtctctg
atagacaaatccgaccttttcttccatgactattccctagcacctctttttgtccaagag
aactatgtacatgtgaaaacagcagctgctgggggagatctgaaaaagcacttgatgctc
ttgagtagagcagctgatagtatatgtgacggtgatctagtggacagacagattcgtagc
aagcaaaactggaaccttctaccaacacaggctatttattcgagtgttctccccggggag
ctgatgagaggttatatgtcccagtttcctgtctttcccagctggctggggaaattttca
tcaacaggcaaacatgaacgtatcgtccaagaactggcaatgcacatgagtctcagaacc
cagatgtgcaagaggacagtaaacatggagtacctgtcttatctgcgggatgcacttgtc
caacctttgaaagattttggagcagatggtgtacaacaagctataaccttcatggactct
tactgcctgatgaaagaagatgttgaaaatatcatggaaataagcatgtggggaggcaaa
cccagtcctttttcaaagctggattccaaggtcaaagccgcttttacgcgtgcctacaac
aaagaggcacatctgactccgtattccctgaattctgtgaagacatctaaaaggcagtca
gcatccatggcaacctctgaactgagtgaggacctgaatgtggatgagacccagtctgat
gaggatgagcaagacagcgttgaaagcgatgcaatgattaagcaaaagaaggcgaagtct
tccaagctgccaaaaagagagaaaaacgatgaaccaacaaaaaaagaagggaaaaggaag
gagaaaacaagacattaa
DBGET
integrated database retrieval system
