Anas platyrhynchos (mallard): 101791710
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Entry
101791710 CDS
T02816
Symbol
BRIP1
Name
(RefSeq) Fanconi anemia group J protein isoform X1
KO
K15362
fanconi anemia group J protein [EC:
5.6.2.3
]
Organism
apla
Anas platyrhynchos (mallard)
Pathway
apla03440
Homologous recombination
apla03460
Fanconi anemia pathway
Brite
KEGG Orthology (KO) [BR:
apla00001
]
09120 Genetic Information Processing
09124 Replication and repair
03440 Homologous recombination
101791710 (BRIP1)
03460 Fanconi anemia pathway
101791710 (BRIP1)
09180 Brite Hierarchies
09182 Protein families: genetic information processing
03400 DNA repair and recombination proteins [BR:
apla03400
]
101791710 (BRIP1)
Enzymes [BR:
apla01000
]
5. Isomerases
5.6 Isomerases altering macromolecular conformation
5.6.2 Enzymes altering nucleic acid conformation
5.6.2.3 DNA 5'-3' helicase
101791710 (BRIP1)
DNA repair and recombination proteins [BR:
apla03400
]
Eukaryotic type
DSBR (double strand breaks repair)
HR (homologous recombination)
BRCA1-B complex
101791710 (BRIP1)
FA (Fanconi anemia) pathway
Downstream FA components
101791710 (BRIP1)
BRITE hierarchy
SSDB
Ortholog
Paralog
Gene cluster
GFIT
Motif
Pfam:
DEAD_2
Helicase_C_2
DEAD
ResIII
Motif
Other DBs
NCBI-GeneID:
101791710
NCBI-ProteinID:
XP_027327945
Ensembl:
ENSAPLG00000009095
EnsemblRapid:
ENSAPLG00030024482
LinkDB
All DBs
Position
20:complement(3061692..3121316)
Genome browser
AA seq
1270 aa
AA seq
DB search
MSSDVSEYTIGGVKIIFPCKAYPSQLAMMNAIVKGLNSRQHCLLESPTGSGKSLALLCSA
LSWQQSMYEKSLLKSSCEKEDKEPEALPPCRCPCHSQLESSEAATNHGASCSNNYETESS
IKTGSLQTNTECQESNTLASKLSAKKRASLCENESDDFQVDRKRIRPLETEQQVRKRHCI
AKGVQLVDALEVYNQRKNGELIVHSEKSVKNLTFSPKPSVSSCTECSCSSGKEAHKDASN
TKKKDKGDQSFIPKIFFGTRTHKQITQITRELKRTAYSTVPMTILSSRDHTCIHPVVSSS
SANRNELCVELLEGKHGKSCPYYHAVHKLSEHHALQSTHNLYQAWDIEDLVSLGKKLRAC
AYFAARELMVGADIVFCPYNYLLDPQIRESMEINLKGQVVILDEAHNIEDCARESVSFSV
TESQLRAAREELDSMVNNNIRQKDHEHLRAVCYSLTNWLKESSSQLVERGYETSCKVWSG
KEMLNILHKMGITSITFPILQKHLSAILEKEEKISVFGREELIEIPIVSPATQIVLKGLF
MVLFCLFKDNSRYADDYKVALQQTYTWMNENQPDVSDSSAFFTNTKQKRKARHKTVVHML
NFWCLNPAVAFSDLNDVRTIVLTSGTLSPMDSFSSELGVKFSIQLEANHVIRNSQVWVGT
IGAGPNGRKLCATFQHAETFEFQDEVGALLLAVCQTVGQGILCFLPSYKLLDKLKDRWMH
TGLWRNLELVKTVIAEPQGGAKSDFDELLKIYYDAIKCKGEKDGALLIAVCRGKVSEGLD
FCDENARAVVTIGIPFPNVKDLQVELKRKYNDQHKNSRGLLPGSQWYEIQAYRALNQALG
RCIRHRSDWGALILVDDRFRNNPNKYITGLSKWIRQQVQHHENFGSALESLQAFAKRNQK
GIDCSSPCSSEFLHVPSNSKDVSSASQQEATIQLSPDVPVKSEEQNLVPDTHFTTPINSI
NPATSKQPSNITAAKKRSGQKVDVGSHSHNATQRRKHMDSTPKTPATKIERAKKNDWTNS
GFMKEHCCFKPLTSTPLPVAANCMSTASSEQKKNVNSAGELIDGVNQCQSSFISEHKPSV
PESHLETTNFSVKNTEAPVAEEHLDELQLQTEPCSELPSVGGKSELSTLNASAGAEDEDE
SIYFTPELYDDVESEEQEIRALDPACNTNENLSECGTSTVADDLFVINTSKTLTVTKEMA
NDDDRNTSLHGIVQNDGSKNSAVNDAKMTSGIEAEQIESQEMDTKKRKISLSRSRNKGVS
SFLLNNTSTQ
NT seq
3813 nt
NT seq
+upstream
nt +downstream
nt
atgtcttctgatgtgtcagaatatactatcgggggagtgaagattatattcccttgcaaa
gcttacccttcacagcttgctatgatgaatgctatagtaaagggcttaaatagcaggcag
cactgtttgttggagagccccacaggaagcggcaaaagcttggcgttactttgttctgca
ttatcatggcagcagtctatgtatgagaaatcactgcttaaatcgtcatgtgaaaaggaa
gacaaagagccagaagccttaccaccgtgtcgctgtccgtgtcattcccaattggagagc
agtgaggctgctacgaatcatggtgcttcttgttctaataattatgaaacagaaagttcc
ataaaaactggaagcctgcaaacaaacacagaatgccaggaaagcaataccctagcttca
aaattgtctgccaaaaaaagggcatctctatgtgaaaatgagagtgatgattttcaagta
gacaggaaaaggattcgtcctttagaaaccgagcaacaggttagaaaacggcattgcatt
gcaaagggagtccagctagttgatgctttagaagtttataatcagagaaaaaatggggag
ctgattgttcattctgaaaaaagtgtgaaaaaccttactttttctcccaaaccatctgtc
agctcttgcactgagtgttcctgttcttctggaaaagaagctcataaagatgctagtaac
acaaagaagaaagacaaaggagatcagtcattcattcccaagatattttttggaacacga
acacacaaacaaataacccagattaccagagagttgaagagaacagcatattccactgtc
cctatgacaattctttctagccgggatcatacctgtattcatccagtggtatctagcagt
agtgctaacaggaatgaactgtgtgtagaattactagaaggaaaacatggcaagtcctgt
ccttactatcatgctgttcataaactcagtgaacaccatgccctacagtctacacataac
ctgtaccaagcttgggacattgaggatctagtcagcctgggaaagaagcttcgtgcctgt
gcatattttgcagcaagagagctcatggtgggagcagatattgtattttgtccttataat
tatctcctagacccacagatacgggagagtatggaaattaacctaaaaggccaagtagtc
attttagatgaagcccacaatattgaggactgtgctcgggagtcagtaagtttcagcgtt
acagaaagtcaactcagagctgctcgagaagagctagattccatggtcaataacaacatt
aggcagaaggatcatgagcatctacgggctgtgtgctactctttgacaaactggttaaag
gagagctctagtcaacttgtagaaagagggtatgaaacttcctgtaaggtttggagtgga
aaagaaatgctgaacattttgcacaaaatgggaataaccagtattacttttcccatttta
cagaaacacctttctgctatcttggaaaaagaagaaaaaatatcagtgtttggaagagag
gagcttattgagataccaattgtgagccctgccacacagattgtgctaaaagggttattc
atggttcttttttgtctttttaaagataatagcaggtatgcggatgactacaaagttgct
ctacaacaaacgtatacttggatgaatgaaaatcagcctgatgtttcagattccagtgcc
ttctttacaaataccaaacagaaaaggaaagcgcgtcataaaactgtagtccacatgctt
aatttttggtgtttgaatcctgctgtggctttttcagacttaaatgatgtcagaacaatt
gttctgacatctggtacgctctctccaatggattcattttcttcagaacttggcgtgaaa
ttttctattcagctggaggcaaatcatgttattcggaactcacaggtttgggttggcacc
attggagcaggcccgaatggtcgaaagctgtgcgccacattccaacatgcagagaccttt
gagttccaagatgaggtgggagcacttctgcttgcagtgtgtcaaacagttggccaagga
attttgtgttttttgccatcctataagcttctggacaaattaaaagatcgctggatgcac
actggcttatggagaaacctggagctggttaagacggtcattgcagagcctcaaggagga
gcaaagagtgactttgacgaactgctgaaaatatactatgatgcaatcaaatgtaaagga
gaaaaagatggagcactccttatagctgtatgcagaggaaaagttagtgaaggcttggat
ttctgtgatgagaatgcccgagcagttgtaaccataggtattccgtttccaaatgtgaaa
gaccttcaggttgaattaaagaggaagtacaatgaccagcacaaaaattcgagaggcctt
ttaccagggagtcagtggtatgaaattcaagcttacagggctctgaaccaggccctggga
aggtgtatacgacatagaagtgattggggtgctcttattctagtcgatgaccgcttccgg
aataaccctaacaagtacataacaggattatctaaatggattcgccaacaagtccagcat
catgaaaattttggtagtgcacttgaatccttgcaagcatttgctaaaagaaaccagaaa
ggcattgattgttcatcaccgtgtagtagtgaatttctccatgtaccttcaaattcaaaa
gacgtgtcatcagcttctcaacaggaggcaactattcagctgtcaccagatgttcctgtt
aaaagtgaggagcaaaatttggtcccagatactcattttactacacccatcaattcaatt
aatcctgcaacatcaaaacagcccagtaatatcacggcagcaaagaaacgaagtggccag
aaagttgatgtagggagtcattctcacaatgcaacacaaagaagaaaacatatggactcc
acacccaaaacgcctgcaactaaaatagagagagcaaaaaagaatgattggactaattct
ggttttatgaaagaacactgctgctttaaaccactgacttcaacgcctttgcctgtagct
gcaaactgcatgtccacagcaagcagcgaacaaaagaagaatgtgaatagtgctggtgaa
cttattgatggtgtaaatcaatgccagtcatcattcatttcagaacataaaccaagtgta
ccagaatcacatttggaaacaactaatttttcagttaaaaatactgaggctccggttgcc
gaagagcatcttgatgagctacagcttcaaactgagccctgcagtgagcttccttctgta
ggagggaaatctgaactttcaacgttaaatgcatctgcaggagctgaggatgaggatgag
agtatctacttcacaccagaactctatgatgatgtggaatcagaggaacaggaaatcaga
gcactagatccagcctgtaacacaaatgagaatctgagtgaatgtggaacatccacagta
gctgatgatctttttgttatcaatacctcaaaaacactaactgtaacaaaagaaatggct
aatgatgatgacagaaacacaagtttacatggaatagtgcaaaacgatgggagtaagaat
agtgcagttaatgatgcaaagatgactagtggaatagaagcagagcagatagaatctcaa
gagatggacaccaaaaaacggaaaatcagtctttccagatcacgaaataaaggtgtgtca
tcctttttattgaacaatactagcacacagtga
DBGET
integrated database retrieval system
