Anas platyrhynchos (mallard): 101792241
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Entry
101792241 CDS
T02816
Symbol
KCNMA1
Name
(RefSeq) calcium-activated potassium channel subunit alpha-1 isoform X37
KO
K04936
potassium large conductance calcium-activated channel subfamily M alpha member 1
Organism
apla
Anas platyrhynchos (mallard)
Pathway
apla04270
Vascular smooth muscle contraction
Brite
KEGG Orthology (KO) [BR:
apla00001
]
09150 Organismal Systems
09153 Circulatory system
04270 Vascular smooth muscle contraction
101792241 (KCNMA1)
09180 Brite Hierarchies
09183 Protein families: signaling and cellular processes
04040 Ion channels [BR:
apla04040
]
101792241 (KCNMA1)
Ion channels [BR:
apla04040
]
Voltage-gated cation channels
Potassium channel, calcium- and sodium-activated (KCa/KNa)
101792241 (KCNMA1)
BRITE hierarchy
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Gene cluster
GFIT
Motif
Pfam:
Slo-like_RCK
Slowpoke_C
BK_channel_a
Ion_trans
Ion_trans_2
TrkA_N
Motif
Other DBs
NCBI-GeneID:
101792241
NCBI-ProteinID:
XP_005015785
Ensembl:
ENSAPLG00000013104
LinkDB
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Position
6:13339172..13808436
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AA seq
1160 aa
AA seq
DB search
MANGSGGGGGSYPGGSGGGGGLRMSNNINANNLNTDSSSSPVNVPKMDALIIPVTMEVPC
DSRGQRMWWAFLASSMVTFFGGLFIILLWRTLKYLWTVCCHCGVKSKEAQKINGGGDTQA
DGACKPTDEKEENVAAEVGWMTSVKDWAGVMISAQTLTGRVLVVLVFALSIGALVIYFID
SSNPIESCQNFYKDFTLQIDMAFNVFFLLYFGLRFIAANDKLWFWLEVNSVVDFFTVPPV
FVSVYLNRSWLGLRFLRALRLIQFSEILQFLNILKTSNSIKLVNLCSIFISTWLTAAGFI
HLVENSGDPWENFQNNQQLTYWECVYLLMVTMSTVGYGDVYAKTTLGRLFMVFFILGGLA
MFASYVPEIIELIGNRKKYGGSYSAVSGRKHIVVCGHITLESVSNFLKDFLHKDRDDVNV
EIVFLHNISPNLELEALFKRHFTQVEFYQGSVLNPHDLARVKIESADACLILANKYCADP
DAEDASNIMRVISIKNYHPKIRIITQMLQYHNKAHLLNIPSWNWKEGDDAICLAELKLGF
IAQSCLAPGLSTMLANLFSMRSFIKIEEDTWQKYYLEGVANEMYTEYLSSAFVGLSFPAV
CELVFAKLKLLMIAIEYKSEKRESSILINPGNHVKIQEGTLGFFIASDAKEVKRAFFYCK
ACHDDITDPKRIKKCGCKRLEDEQPSTLSPKKKQRNGGMRNSPNSSPKLMRHDPLLIPGN
EQIDNMDANVKKYDSTGMFHWCPAKDIEKVILTRSEAAMTVLSGHVVVCIFGDVQSALIG
LRNLVMPLRASNFHYHELKHIVFVGSLEYLRREWETLHNFPKVSILPGTPLSRADLRAVN
INLCDMCVILSANQNNIDDASLQDKECILASLNIKSMQFDDSIGVLQANSQGFTPPGMDR
SSPDNSPVHGLLRQPSITTGANIPIITELVNDSNVQFLDQDDDDDPDTELYLTQPFACGT
AFAVSVLDSLMSATYFNDNILTLIRTLVTGGATPELEALIAEENALRGGYSTPQTLANRD
RCRVAQLALYDGPFADLGDGGCYGDLFCKALKTYNMLCFGIYRLRDAHLSTPSQCTKRYV
ITNPPYEFELVPTDLIFCLMQFDHNAGQSRASLSHSSHSSYSSSKKSSSVHSIPSTANRP
NRTKTRDSREKQKYVQEDRL
NT seq
3483 nt
NT seq
+upstream
nt +downstream
nt
atggcaaatggcagcggcggcggcggcggctcctacccgggcggcagcggcggcggcggc
ggccttagaatgagtaacaatatcaacgccaacaatctcaacacagactcgtcctcctcc
cccgtcaatgtgcccaagatggatgcgctcatcatcccggtgaccatggaggtgccctgc
gatagccgcggacagcgcatgtggtgggctttcctcgcctcatccatggtcactttcttt
gggggactgtttatcatcctgctgtggaggaccctcaagtacctgtggactgtctgctgc
cactgcggggtcaaaagcaaggaggcccagaagatcaatggtggtggagatacacaggca
gatggggcctgcaaaccaacagatgaaaaagaagagaatgtggcagcagaagtgggatgg
atgacctctgtaaaagattgggcaggagtcatgatatctgcccagacattaactggcaga
gtacttgttgtcttagtcttcgctcttagtattggtgctcttgtaatatacttcatagat
tcatcaaacccaatagagtcctgccagaatttctacaaagatttcacgttacagattgac
atggctttcaatgtgttcttcctactctacttcggcttgcgtttcatagcagccaatgac
aagctatggttttggctagaagttaactcagtcgtagatttcttcacggtccctccagtg
tttgtgtcagtatatttaaacagaagttggcttggtttaagatttttaagagcccttagg
ctgatacagttttcagaaatattgcagtttttgaatatccttaaaacaagtaattccatc
aagcttgtgaatctgtgctctatatttatcagcacatggctgacagcagctgggttcata
catttggtggagaactcaggggatccatgggaaaatttccaaaataatcaacagctaaca
tattgggaatgtgtttatttactgatggttacaatgtccactgttggttatggagatgtt
tatgcaaaaacaacccttggtcgccttttcatggtcttcttcatccttggaggattggcc
atgtttgccagctacgtccctgaaatcatagagttaataggaaaccgcaagaaatatggt
ggttcctatagtgcggttagtggaagaaagcacatagttgtctgtggtcacataacactt
gaaagtgtgtccaacttcctgaaggacttcctgcacaaggatagggatgatgtcaacgta
gaaatcgtctttctgcataatatctcccctaaccttgagctggaggctctctttaaacga
cacttcactcaggtggaattttatcagggttcagtccttaatccccatgacctggcaaga
gtgaagatagagtcagcagatgcgtgcctaattcttgccaataaatactgcgctgaccca
gatgctgaagatgcctccaacattatgagagttatatcaataaagaattaccatccgaag
ataagaattatcacccagatgttgcagtatcataataaggcccatctactaaatatccca
agctggaactggaaagaaggggatgatgcaatctgtcttgcggagcttaagctgggtttc
atagcccagagctgcctggcacctggcctttcaacaatgttagccaaccttttctctatg
agatcattcataaagattgaggaggatacgtggcagaaatactatctggaaggagttgca
aatgaaatgtatacagaatatctgtctagtgcctttgtgggtttgtctttccctgcagtt
tgtgaactggtgtttgcgaaattaaagctcttaatgatagccatagaatacaagtcagaa
aaacgggaaagcagcatattaatcaatcctggaaaccatgtcaagattcaagaaggtacc
ttaggattcttcattgcaagtgatgccaaagaagtaaaaagggcatttttttactgcaag
gcctgtcatgatgacatcacagatcccaaaaggataaaaaaatgtggctgcaaacggctt
gaagatgagcagccatcgacactatcacccaaaaaaaagcaacgaaatggaggcatgaga
aattcacccaactcctcacccaaactgatgaggcatgaccccttgttaattcctggcaat
gaacagattgacaatatggatgccaatgtgaaaaaatatgactctactgggatgtttcat
tggtgtccagccaaggacattgaaaaggtcattttgactcgaagtgaagcagcgatgaca
gttttaagtgggcatgtagtcgtttgcatatttggggatgttcaatctgctttgattgga
ttaagaaatttagtgatgccattacgagccagcaactttcactaccatgaactcaagcac
attgtgtttgtgggttcacttgaatacctgagaagggagtgggagacactgcataacttc
ccaaaggtttcaatcttgcctggtacgccattaagtcgggctgatttaagggctgtcaac
atcaacctctgcgacatgtgcgttatcctgtcagccaatcagaataatattgatgatgct
tcgctgcaggacaaggaatgcatcttggcgtcactcaacatcaaatctatgcagtttgat
gacagcattggggtcttgcaggctaattcccaaggctttacaccccctgggatggatagg
tcatctccagacaacagtccggtccatggcctgttacgtcaaccttccattacaacagga
gccaacatccctattataacagagctagtaaatgattcaaacgttcagttcttggaccaa
gatgatgatgatgatccagacacagaactgtatctcacgcagccctttgcatgtggaacc
gcatttgctgtcagtgtgctggactctctcatgagcgcaacatacttcaatgacaatatc
ctcacactgatacggacattggtaacaggaggagccacaccggagctggaagcactgatt
gccgaggaaaatgcgttgagaggaggttacagcacaccacagacacttgcaaacagggac
aggtgtcgagtagctcagttggctttgtatgacggtccatttgcagacctaggggatgga
ggttgctacggagatctattttgtaaagcactgaaaacatacaatatgctttgctttgga
atttaccgattaagggatgcacatctaagcactcccagccaatgcactaaacgttatgtt
atcacaaacccaccgtacgagtttgagcttgtgccgacagacttgatcttctgtttgatg
caatttgaccacaatgccggccagtcccgagccagtctttctcattcctcccattcctcc
tattcttccagcaagaagagctcatctgttcactccatcccatccacagcaaaccgaccc
aaccgcaccaagaccagggattctcgggaaaaacagaagtacgtgcaggaagatagactt
tga
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