Anas platyrhynchos (mallard): 101792634
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Entry
101792634 CDS
T02816
Symbol
ARID1B
Name
(RefSeq) LOW QUALITY PROTEIN: AT-rich interactive domain-containing protein 1B
KO
K11653
AT-rich interactive domain-containing protein 1
Organism
apla
Anas platyrhynchos (mallard)
Pathway
apla03082
ATP-dependent chromatin remodeling
Brite
KEGG Orthology (KO) [BR:
apla00001
]
09120 Genetic Information Processing
09126 Chromosome
03082 ATP-dependent chromatin remodeling
101792634 (ARID1B)
09180 Brite Hierarchies
09182 Protein families: genetic information processing
03000 Transcription factors [BR:
apla03000
]
101792634 (ARID1B)
03021 Transcription machinery [BR:
apla03021
]
101792634 (ARID1B)
03036 Chromosome and associated proteins [BR:
apla03036
]
101792634 (ARID1B)
Transcription factors [BR:
apla03000
]
Eukaryotic type
Helix-turn-helix
ARID
101792634 (ARID1B)
Transcription machinery [BR:
apla03021
]
Eukaryotic type
RNA polymerase II system
Coactivators
BAF/PBAF complex
101792634 (ARID1B)
Chromosome and associated proteins [BR:
apla03036
]
Eukaryotic type
Chromatin remodeling factors
BAF complex
101792634 (ARID1B)
BRITE hierarchy
SSDB
Ortholog
Paralog
Gene cluster
GFIT
Motif
Pfam:
BAF250_C
ARID
ABC_ATPase
Motif
Other DBs
NCBI-GeneID:
101792634
NCBI-ProteinID:
XP_027310199
Ensembl:
ENSAPLG00000007574
EnsemblRapid:
ENSAPLG00030023365
LinkDB
All DBs
Position
3:54794974..55114339
Genome browser
AA seq
2391 aa
AA seq
DB search
MAAQVAAAPAGAAKGRAGGLPPRPERGPGGAGSSPAGAGGGVSRAGQPRQRPGEPPAMAN
TAAPAAGNGSGTAASASEPAAKDGGSCSALPARRSAPSSSSSSSSNPGPAMETGLLPSHK
LKSVGGDHPAAPPQHQHQHHQHQHRAQHPQHHAHHHHRAHHPHHHHHHHHRPQQQQQQQQ
QQLNQFPPPPPPQQPPPQHHPVQNNNSSLGGGGGGGSNNNGGGGGGAAQPSADMEQQQHG
GKDSVLGAQAEPPQQPQQLLNKGAADEEEMPGKMGEPIGGRYDHPGLGPLGGQQQPQQPP
PSAGSGGGGLGGGGGGGGSGGGGGGPSAVGVSEFNSYYGNAAPAPASSAPASRAGPCFDQ
HGGQQSPGMGIMHPAAAPNSMDPLQNSHEGYPNSQYNHYPAYARGPGGPGGGGGAGGGGA
GAVAAAAAAAGAGGGGGGGGGGGGGGGGGGGGGGYGGSAAGYGVLSSPRQPGGGMMMGPG
GGAGLGKAAAGAAAAAAGGFARFSGQNQHPSGATPTLNQLLTSPSPMMRSYGGSYPDYSS
PSAPPPPQPQPQAAAAAPGSQQAAAGMGMGKDMGAQYGAANPAWAAAQQRNHPAMSPGST
GQTISRTQGSPMDPMVMKRPQLYGMGNNPHSQTQQSSPYPGQSYGPPGPQRYPVGMQGRA
PAAMGGMQYPQQQIPPQYGQQGVSGYCQQGQQPYYNQQPQHLPPQAQYLSQAQQRYQAQQ
DMSQEGYGTRSQPPMAPGKPNHEDLNLIQQERPSSLPVEVLASEDATFGHKDLSGSIDDL
PTGTEATLSSAVSASGSTSSQGEQSNPAQSPFSPHASPHLSGIPGGPSPSPVGSPVGSNQ
SRSGPISPASIPGSQMPPQPPGSQSESSSHPALSQSPMPQDRGFMAGIQRNPQMSQYGPQ
QTGPSMSPHPSPGGQVHPGIGSFQQSNSSGTYGPQMSQYGPQGNYSRPPTYTGVPNTSYS
GPGPGMGINANSQMHGQGPSQPCSTMPLGRMPSAGMQSRPFPGNMSSMTPNSPGMSQQGG
PGMGPPMPSVNRKAQEAAAAVMQAAANSAQSRQGNFPAMNQSGIMGSSSPYTQPMNNSSG
LMNPQAPPYSMAPNMVNSSTAPMGLADMMTPGESKLPLPLKADGKEEGAPQPESKSKDSY
SSQGISQPPTPGNLPVPSPMSPSSASISSFHGDESDSISSPGWPKTPSSPKSSSSTTTGE
KITKVYELGNEPERKMWVDRYLTFMEERGTPVASLPAVGKKPLDLFRLYVCVKEIGGLAQ
VNKNKKWRELATTLNVGTSSSAASSLKKQYIQYLFAFECKIERGEEPPPEVFSTGDTKKQ
PKIQPPSPANSGSLQGPQTPQSTGSNSMTEVPGDLKPPTPASTPHGQMTPMQGGRNSAVS
VHDPFSDVSDSAFPKRNSMTPNAPYQQGINMPDMMGRMPYEPNKDPFGGMRKVPGSNEPF
MTPGQMPNSGIQDMYNQSPSGAMSNMSMSQRQQFSYGSGYDRRHEPYGQQYPGQGPPSGQ
PPYGGHQPGMYPQQQNYKRHMDGMYGPPAKRHEGDMYNMQYGNQQQEMYNQYSNAYTGPD
RRPMQGQYPYPYNRERMQGPGQMQQHGIPPQMIGGPMQSSSSSEGPQQNMWPTRNDMPYP
YQNRQGPGGPAQAPPYPGMNRTDDMMVPDQRINHESQWPSHVNQRQPSYMSSSASMQPIT
RPPQSSYQTPPSMPNHISRAPSPASFQRSLENRMSPSKSPFLPSMKMQKVIPTVPVSQVT
GPPPQPPPIRREITFPPGSVEASQPVLKPRRKITSKDIVTPEAWRVMMSLKSGLLAESTW
ALDTINILLYDDSTVATFNLSQLSGFLELLVEYFRKCLIDIFGILMEYEVGDPGHKALDH
KAAKKDDSQSVAEDTGKEENDECIDYFDEEEEEGDDEKVEEEKSIVFSTPGAIADPSERP
KQASKFDKLPIKIVKKNNLFVVDRSDKLGRVQEFDSGLLHWQLGGGDTTEHIQTHFESKM
EIPPRRKAPPPLNSPSKKKDLEGKGESEEQQEKSITATIDDVLSARPGALPEDSNSGSQT
ESSKFPFGIHQAKSHRNIKLLEDEPRSRDETPLCTITHWQDSLAKRCICVSNIVRSLSFV
PGNDTEMSKHPGLVLILGKLILLHHEHPERKRAPQTYEKEEEEDKGVACSKDEWWWDCLE
VLRDNTLVTLANISGQLDLSAYTESICLPILDGLLHWMVCPSAEAQDPFPTVGPNSVLSP
QRLVLETLCKLSIQDNNVDLILATPPFSRQEKLYATLVRYVGDRKNPVCREMSMALLSNL
AQGDTLAARAIAVQKGSIGNLISFLEDGVTMAQYQQSQHNLMHMQPPPLEPPSVDMMCRA
AKALLAMARVDENRSEFLLHEGRLLDISISAVLNSLVASVICDVLFQIGQL
NT seq
7176 nt
NT seq
+upstream
nt +downstream
nt
atggccgcgcaagtggcagcggccccggcgggcgccgccaagggcagggcgggcgggctg
ccgccgcggcccgagcgggggccggggggcgccggcagcagccccgcgggggccgggggc
ggcgtgagccgagcggggcagccccggcagcggccgggcgagccgccggccatggccaat
accgccgcgcccgccgccggcaacggcagcggcaccgccgcctccgcctcggagccggcc
gcgaaggacgggggaagctgctcggcgctgcctgcgcgccgctcggcgccttcctcctcc
tcctcctcctcctccaacccgggcccggccatggagacggggctgctccccagccacaag
ctgaagagcgtcggaggcgatcaccccgccgcgccgccccagcaccagcaccagcaccac
cagcaccagcaccgtgcccagcacccgcagcaccatgcccaccaccaccaccgtgcccac
cacccgcaccaccaccaccaccaccaccaccgcccgcagcagcagcagcagcagcagcag
cagcagctaaatcaattcccgccgccgccgccgccgcagcagccgccgcctcagcaccat
cccgtgcagaataacaacagcagcctcggcggcggcggcggcggcggcagcaacaacaac
ggcggtggcggtggcggcgctgctcagcccagtgcagacatggagcagcagcaacatgga
ggaaaagacagtgttttgggagctcaggccgagcccccgcagcagccgcagcagctgctg
aataaaggcgccgccgacgaggaggagatgcccggcaaaatgggcgagcccatcggcggc
cgctacgaccaccccggcttgggacccctgggcggacagcagcagccccagcagccgccc
ccgagcgccgggagcggcggcggcggcctcggcggcggcggcggcggcggcggcagcggg
ggaggcggcggcggcccctccgcggtgggtgtctcggagttcaatagctattatggcaac
gctgcccctgcccctgccagcagcgctccggcgagccgcgccgggccttgctttgatcaa
catggcggacaacaaagccccgggatggggataatgcaccccgcggcggcccccaacagc
atggaccccctgcagaactcgcacgaggggtaccccaacagccagtacaaccactacccg
gcctacgcccgcggccccggcggccccggcggcggcggcggcgcgggcggcggcggcgcg
ggagccgtggcggcggcggcggcggccgccggggcaggcggcggaggaggcggcggagga
ggaggaggaggaggaggcggcggcggcggcggcggcggaggctacgggggctcggcggcc
ggctacggggtgctgagctccccgcggcagccgggcggcggcatgatgatgggccccggc
ggcggggccggcctcggcaaggctgctgccggcgcggcggcggcggcggccggcggcttc
gcgcggttctccgggcagaaccagcacccgtccggggccacccctaccctgaaccagctg
ctcacgtcccccagccccatgatgcggagctacggcggcagctaccccgactacagcagc
cccagcgccccgccgccgccgcagccccagccccaggcagcggcggccgccccgggcagc
cagcaggcagcggcgggcatgggcatgggcaaggacatgggcgcgcagtacggggcggcc
aacccggcctgggcagcggcgcaacaaagaaatcacccggccatgagccccggcagcacc
gggcagaccatcagcaggacgcagggcagtccgatggatccaatggtgatgaagagacct
cagttgtacggcatgggcaataaccctcactctcagacgcagcagagcagcccctaccct
gggcagtcctacggccctcccggcccccagcgctaccccgtgggaatgcagggacgagcc
ccggccgccatgggaggaatgcagtatccgcagcagcagataccgccccagtatggtcag
caaggcgtgagcggctactgccagcagggccagcaaccgtactacaaccagcagccgcag
cacctgccgccccaggcgcagtatctgtcgcaggcccagcagaggtaccaggcccagcag
gacatgtctcaggaaggctatggaaccagatctcaacctcctatggccccaggaaagcct
aaccatgaagacttgaatctaatccagcaagaaagaccgtcgagcttaccagttgaagtc
ttggcctccgaggatgctacatttggacacaaggatctgtctggatccattgatgacttg
ccgactggaactgaagcaacgctgagctcagctgttagcgcatcaggctctacaagcagc
caaggggagcagagcaaccccgcacagtctccattctcccctcatgcttctccacatctc
tctggcatccctgggggcccatcgccttcccctgtaggctctcctgttggaagcaaccag
tcgaggtctggtcccatttctccagcaagtattccaggcagtcagatgccaccgcagcct
cctggcagccagtcagaatccagctcccaccctgctttgagccagtcaccaatgccacag
gaccgaggttttatggcaggcatacagaggaacccccaaatgtcacagtatggacctcaa
caaactggaccttccatgtcaccacacccctcacctggaggccaagtgcatcctggaatt
ggtagctttcagcagagtaattcaagtggtacttatgggcctcagatgagccagtatgga
ccacaaggaaactactccagaccaccaacatacactggcgtgcccaacacaagctacagt
ggcccaggacccggcatgggtataaatgccaacagtcagatgcatggacaggggccaagc
cagccttgtagtaccatgcccctgggacggatgccatcagctgggatgcagagcagacca
tttcctggaaacatgagcagtatgacccccaattctcctggcatgtctcagcagggaggc
cccgggatgggcccacccatgccatctgtgaaccgtaaggcacaggaggcggctgctgca
gtgatgcaggctgctgcgaactccgctcagagcaggcaaggcaattttcctgccatgaat
caaagcggtattatgggatccagctccccctacacgcagccgatgaacaacagctctggc
ttgatgaacccgcaggctcctccatacagcatggcacctaacatggtgaacagttccaca
gcacctatgggtcttgcagatatgatgacacccggtgagtccaaactaccccttcctctc
aaagcagatggcaaagaagaaggagcccctcaacccgagagcaagtcaaaggatagctac
agctctcagggtatttctcagcccccaaccccaggcaacctgccagtcccttccccaatg
tccccaagctctgctagcatctcctcatttcatggagatgaaagtgatagcattagcagc
ccaggctggccaaagactccatcaagccctaaatcaagttcctctaccacaactggagag
aagatcacaaaagtctatgaactaggaaacgaaccagagcgcaagatgtgggtagaccgg
tacctcacattcatggaggagaggggcacacctgtggccagtctgccagctgtgggcaag
aagcccttggacctgttcaggctgtacgtctgtgtcaaagagattggaggtttagcacag
gttaataaaaacaagaagtggcgtgagctggcaacaacattgaacgttggcacttcgagc
agtgcagccagctccctgaaaaaacaatacattcagtacctgtttgccttcgagtgcaag
atcgagcgaggggaggagccccctccagaagtcttcagcaccggagataccaagaaacaa
cctaagattcagccgccatctcctgctaattctggttccttgcaaggtccacagactcca
cagtctactggtagtaattccatgacagaagtgccaggcgatttgaagcccccaacacca
gcatcaacacctcatggacagatgacacctatgcagggtggcagaaacagcgcagttagt
gtgcacgatcccttttctgatgtaagtgattcagcattcccgaagcgaaactccatgacg
ccaaatgcaccataccagcagggaataaacatgccagatatgatgggaaggatgccatat
gagccgaataaagatcctttcggtggaatgagaaaagtgcctggaagcaatgagcctttc
atgacccctggacaaatgcccaacagtggaatacaggatatgtataaccagagtccatct
ggagcgatgtccaacatgagcatgagccagcgacagcagttctcttatggaagtggctat
gacaggaggcatgaaccatacgggcagcagtatccaggacaaggacctccctcaggacag
ccaccatatggaggacatcaacctggaatgtatccacagcagcagaactacaagcgacac
atggatggcatgtatgggcccccagccaagcgccatgaaggggatatgtataacatgcag
tacggcaaccagcagcaggagatgtataaccagtacagcaatgcttacactgggcctgac
aggaggcccatgcagggacagtatccgtatccgtataacagggagaggatgcagggccca
ggacaaatgcagcagcacggaatacctccccagatgattggtggccccatgcagtcgtca
tcctccagtgaaggtcctcagcagaacatgtggccaacacgaaacgatatgccttaccct
taccagaacaggcaaggtccaggaggccctgcacaggccccgccgtatccagggatgaat
cgcactgatgatatgatggtacctgaccagaggataaaccacgagagtcagtggccttct
catgtcaaccaacgtcagccttcttatatgtcatcctcagcctccatgcagcctatcact
agacctcctcagtcatcctaccagacgccaccctctatgccaaatcacatctctagagct
ccaagtccagcatccttccagcgctctttggaaaaccgtatgtctccaagcaagtctcct
ttcctaccctccatgaagatgcaaaaggttatacccacagttccggtgtcacaggtcaca
ggacctccaccccaaccaccaccgattaggcgagaaatcaccttccccccaggctctgta
gaagcatcgcaaccagtcttaaaaccaagacgaaagattacctcaaaagatattgtaact
cctgaggcctggagagtgatgatgtctcttaaatctggtcttttggctgaaagtacctgg
gcgctagacactattaatattcttctgtatgatgacagcactgtcgctactttcaacctc
tctcagttgtctggatttctagagcttttagtagaatattttagaaaatgcctgattgac
atttttggaatccttatggaatatgaagtgggagatccaggtcacaaagcacttgatcac
aaagcagccaagaaagatgatagccagtccgtggcagaggatactggaaaagaggagaac
gacgaatgtattgactattttgatgaagaggaggaggagggggatgatgaaaaggtagaa
gaagaaaaaagcattgttttttccactcctggtgccattgctgatccaagcgagaggcca
aaacaagccagtaaatttgacaagctgccaataaagattgtaaagaaaaataatctattt
gtggttgaccgatctgacaaacttggacgcgttcaggaatttgatagtggacttctccac
tggcagcttggtggtggtgacacaactgagcatatccagactcactttgaaagcaagatg
gagattcctccacgcaggaaagcccctcctcccttgaactctccaagcaaaaagaaggac
ctcgaggggaaaggtgaatctgaggaacagcaagaaaaaagtataacagcaaccattgac
gatgtcctctcagcccggccaggagcattgcctgaagactcaaactctggttcccaaaca
gagagcagtaaatttccctttgggatccatcaagccaaaagccaccggaatattaaactg
ctagaggatgagccaaggagccgggatgagactcctctatgcaccataactcactggcaa
gactccttggccaaacgctgcatctgtgtgtcaaatatcgtccgtagcttgtcttttgtg
cctggcaatgacaccgaaatgtccaaacatccaggcttggtgctgatcctgggaaagttg
atccttcttcaccatgagcatccagaaagaaagcgagcgccgcagacttacgagaaggag
gaagaggaggacaaaggggtggcctgcagcaaggatgagtggtggtgggactgcctcgag
gtcttgagggataatacattggtcacattagccaacatttctgggcagctagacttgtct
gcttacacagaaagcatctgtttgccaattttggatggcttgctgcactggatggtgtgc
ccgtctgcggaggcacaggatccttttccaaccgtggggcccaactcagttctttcgcct
cagagacttgtgctggagaccctgtgtaagctcagtatccaggacaataatgtggacctt
atcttggccacccccccattcagtcgtcaggagaaactctacgctactttagttaggtac
gttggggatcgcaaaaacccggtctgccgagaaatgtccatggcgctcttatcgaacctt
gcccagggggacacattagcagcaagggcaatagctgtgcagaagggaagcatcggaaac
ttgataagcttcctggaggatggggtcaccatggcccagtaccagcagagccagcataac
ctcatgcacatgcagcctccgcctctggagccgcctagcgtagacatgatgtgcagggca
gccaaggccttgctggccatggctagagtggacgagaaccgctcagagttccttttgcac
gagggtcgtttgctggatatctcaatatctgctgtcctgaactctctggttgcatctgtc
atctgtgatgtactttttcagatcgggcagttatga
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integrated database retrieval system
