Anas platyrhynchos (mallard): 101792783
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Entry
101792783 CDS
T02816
Symbol
THOC5
Name
(RefSeq) THO complex subunit 5 homolog
KO
K13174
THO complex subunit 5
Organism
apla
Anas platyrhynchos (mallard)
Pathway
apla03013
Nucleocytoplasmic transport
Brite
KEGG Orthology (KO) [BR:
apla00001
]
09120 Genetic Information Processing
09122 Translation
03013 Nucleocytoplasmic transport
101792783 (THOC5)
09180 Brite Hierarchies
09182 Protein families: genetic information processing
03019 Messenger RNA biogenesis [BR:
apla03019
]
101792783 (THOC5)
03041 Spliceosome [BR:
apla03041
]
101792783 (THOC5)
Messenger RNA biogenesis [BR:
apla03019
]
Eukaryotic type
mRNA surveillance and transport factors
Transport factors
TREX complex
101792783 (THOC5)
Spliceosome [BR:
apla03041
]
Other splicing related proteins
Spliceosome associated proteins (SAPs)
TREX complex
101792783 (THOC5)
BRITE hierarchy
SSDB
Ortholog
Paralog
Gene cluster
GFIT
Motif
Pfam:
FmiP_Thoc5
Motif
Other DBs
NCBI-GeneID:
101792783
NCBI-ProteinID:
XP_038043535
Ensembl:
ENSAPLG00000005801
LinkDB
All DBs
Position
16:5752106..5768474
Genome browser
AA seq
694 aa
AA seq
DB search
MASDAGKKRKPKVIRTDGATPEGKRGKAEGEQDARYYSEECEVDLRDPIKDYELYKETCQ
ELQRLMAEIQELKSRGIKDNASEIDERRVQSCVHFMTLKKLNRLAHIRLKKGRDQTHEAK
QKVDAYHLQLQNLLYEVMHLQKEITKCLEFKSKHEEIELVSLEEFYSEAPTEISRPDITL
TEPHQQTLARLDWELEQRKRLAERYKECLTIKEKILKEIEVKKEYLSSLQPRLNSIMQAS
LPVQEYLFMPFDQAHKQYETARHLPPPLYVLFVQASAYGQACDKKLVVAIEGSVEEAKAL
YKPPEDSQDDESDSDVEEEQTTKRRRPTLGVQLDDKRKEMLKRHPLCVTIDIKCKAQSSF
PSLLAQTDNVLHLTFYYLMNLNVMTVKAKVTTAVEMTTAISAGDLLSPDSLLSCLYPGDH
GKKTPNPANQFQFDKVGIVTLSDYVTELGHPYVWVQKLGGLHFPKEQPQHTVTADNSLSA
SHMELTVKLLRTRLQSRLALHKQFASLEHGVVPVSSECQHLFPTKIVSRLVKWSAIPFED
YAELPYTKDVVEAGLAEDTHLYYMALIERGTAKLQAAVVLNPGYSALPPIFSLCLNWKGE
RTGNNDDNIRAMESEVNVCYKELWGPKPGYQLLTNQLQRLCMVLDVYLETEPHDTSVEGP
KEFPQEKMCLRLVRGPMRLKPFKFNFPQGFFSHR
NT seq
2085 nt
NT seq
+upstream
nt +downstream
nt
atggcctcggacgccggcaagaagcggaaacccaaagtgatccgcaccgacggggccacg
cccgagggcaagcgcggcaaggcggagggcgagcaggatgcccggtactacagcgaggag
tgcgaggtggacctgcgggaccccatcaaggactacgagctgtacaaggagacctgccag
gagctgcagcgcctcatggccgagatccaggagctgaagagccgcggcatcaaggacaac
gcctccgagatcgacgagcggcgcgtgcagagctgcgtgcacttcatgaccctgaagaag
ctgaaccgcctggcgcacatccgcctgaagaaggggcgagaccagacccacgaggcgaag
cagaaggtggacgcctaccacctgcagctccagaacctgctgtacgaggtgatgcacctg
cagaaagagatcaccaagtgcctggagttcaagtcgaagcacgaggagatcgagctggtc
agcctggaggagttctacagcgaggcccccaccgaaatcagccggccggacatcaccctg
accgagccccaccagcagaccctcgcccgcctcgactgggagctggagcagcgcaagagg
ctggcagagaggtacaaggaatgcctgaccatcaaggaaaagatcctgaaggagatcgag
gtgaagaaggagtacctgagcagcctgcagcctcgcctcaacagcatcatgcaggcctcc
ctgcccgtgcaggagtacctcttcatgcccttcgaccaggcgcacaagcagtacgagaca
gcccgccacctgccaccgcccctctacgtcctcttcgtccaagccagcgcctacgggcag
gcctgcgacaagaagctcgtggtggctatcgaaggcagcgtggaggaagccaaagccctg
tacaagccgcccgaggactcgcaggatgacgagagcgactcggacgtggaggaggagcag
accacgaagcggcgccggcccacgctgggcgtgcagctggacgacaagcgcaaggagatg
ctgaagcggcacccgctgtgcgtcaccatcgacatcaagtgtaaagcacaaagcagtttc
ccttctttgttggcacagactgacaacgtgctgcacctgaccttctactacctgatgaac
ctcaacgtcatgacggtgaaggccaaggtgaccactgccgtcgagatgacgactgccatc
agcgctggcgacctgctgtccccggactccctcctgagctgcctgtacccgggagaccac
gggaagaagacccccaaccccgccaaccagttccagttcgacaaagtgggcatcgtcacc
ttgagtgactacgtgacggagctggggcacccctacgtgtgggtgcagaagctgggcggc
ctgcacttccccaaggagcagcctcagcacacggtcaccgccgacaactcgctgagtgcc
agccacatggagctgacggtgaagctgctgcggacgaggctgcagtcccgcctggccctg
cacaagcagtttgcctctctggagcacggcgtggtgccggtctccagcgagtgccagcat
ctcttccccaccaagatcgtctcgcgcctggtgaagtggagcgccatccccttcgaggac
tacgcggagctgccctacactaaagatgtggtggaggccggcctggccgaggacacgcac
ctctattacatggccctgatagaaaggggcacagccaagctccaggccgctgtggtcctg
aaccccggctactccgcgttgccacccatcttcagcctctgcctcaactggaaaggagag
cgaaccggcaacaacgacgacaacattcgggcgatggagagcgaggtcaacgtgtgctac
aaggagctgtgggggcccaaacccggctaccagctcctcaccaaccagctgcagcgcctc
tgcatggtgctggacgtctacctggagaccgagccccacgacaccagcgtggaggggccc
aaggagtttccccaggagaaaatgtgtctgcgcctggtcaggggccccatgcgcttgaag
cccttcaagttcaacttcccgcagggcttcttcagccaccgctga
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