Anas platyrhynchos (mallard): 101793143
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Entry
101793143 CDS
T02816
Symbol
AFF1
Name
(RefSeq) AF4/FMR2 family member 1 isoform X1
KO
K15184
AF4/FMR2 family member 1
Organism
apla
Anas platyrhynchos (mallard)
Brite
KEGG Orthology (KO) [BR:
apla00001
]
09180 Brite Hierarchies
09182 Protein families: genetic information processing
03021 Transcription machinery [BR:
apla03021
]
101793143 (AFF1)
Transcription machinery [BR:
apla03021
]
Eukaryotic type
RNA polymerase II system
Other transcription-related factors
Super elongation complex (SEC)
101793143 (AFF1)
SSDB
Ortholog
Paralog
GFIT
Motif
Pfam:
AF-4
AFF4_CHD
AF4_int
THD_CWZF3-5-7
Motif
Other DBs
NCBI-GeneID:
101793143
NCBI-ProteinID:
XP_038034643
Ensembl:
ENSAPLG00000004059
LinkDB
All DBs
Position
4:45088358..45163498
Genome browser
AA seq
1220 aa
AA seq
DB search
MASPDDKSTTDSLYNEDRNLLRIRERERRNQEALQERDKFSENAPLFAEPYKTNKEDELS
SRIQNMLGNYEEVKELISARCHQNLIGIPKSIAPLIPQGKPDRPFFPEKTSHAPSAFHHA
SRHPHMGPPVVAPPPPSHSVHYPKAQSRAEPASGLHAKSHSLSSGRSQGQEHGHGGQEGH
TGSRHKRTERRAVGEGRATELQASLLQLSPLLSPLSTPVTPLSPLHSSQHVNSRSQNSSK
SHGLTYTQTKSPQDLVAGSQENESRDSSAVNLAGTTQPSSQTFPPPLPSKTSAMQQKPTA
YVRPMDGQDQAPVESPELKPLPEEYHTEPYEKISDLKANAKAKLSKLKIPAEPIEQTFPS
DVQCVEEILKEMTHSWPPPLTAIHTPSTAEPSKFPFPAKESQHVGSVAQNQKQYDAPSKT
LPSSQPRTSMLQDDLQLSDSEDSGDDQVVEKPPSSLAPPSALQSQPESVASAHSSSPESG
STSDSDSSSDSETESSSSDSEANDPDPPRVSAPEPDPPTSNKWQLDNWLTKVNPPAVPAE
SPRETAHTDGHEEDKEPGQQIDSDSSHEHAEPREPHHKSSARAARASQDAHLPTKRNCQK
SPACAEEPSQRQTVGIKRPSKPPVHEGPKGGLKVESEPGPYEVRDQSSRDKPKVKTKGRP
KSSDRKELKTSLQEPPEGRKHKSSHQASAKALLDPKPPRDVVLGSTQEHLALSPVPQGQG
TTPTRTSGHRPAAVLREDFHKEKLPLSVREKKLLSPVRDVQVPRSLMVKIDLPLLSRVPQ
LPGKGGHQKRAEAKEFPGARGQDVERKATDTPDKSFKKRKREMEKEIDRKKMKSDKETKS
LQSSTNKDSTKQKAPKASFETQKKDLLLPPPLPPMSPAHSAPKSVKMAQKRPRSENGQLP
ATENNTARDSSSHKDPLSAKHKKVERKHSEQVKGNKGSAGDVTNPFPVPSLPNGTSKPRR
PQVKFEKQHSMEYHIEEAKRLKHKADAMTDKTGKAFQYLDAALSFIEYGIAMESDASAPK
SAYSIFADTIDLIKFIMTLKPFTDASASSHEKIFAVLCMRCQSLLHMAMFRYKKDTAIKY
SRILNDHFKSSSRVTQAPSPCVARSTGMPSPLSPMPSPAGSVSSQPGSNASNCGGNSISS
SVTIPYNIPSITSSYVNITSYILYAYDIWEQADALARKNKEFFAELSAAVCPLALNSSMT
ELVHYSRQGLQWLRLETNTP
NT seq
3663 nt
NT seq
+upstream
nt +downstream
nt
atggcatctccagatgacaagagcaccacagacagcttgtacaatgaggacagaaacctg
ctgcgtattcgagagcgagagaggcggaatcaggaggctctgcaggagagagacaagttc
agtgagaacgccccgctctttgccgagccctacaagactaacaaagaggatgagttgtca
agccgtattcagaacatgctgggcaattatgaggaggtcaaggagcttatcagcgccagg
tgccatcagaatctcataggaataccaaaaagcatcgctcctctgatccctcaaggaaag
cctgatcgcccgttcttccctgaaaagaccagccatgcaccatctgcattccaccatgcg
agccgccatccacacatgggacctccggttgtagctcccccccctccaagccactccgtt
cactacccaaaggcacaatcacgagcagaaccagcgtcaggtttgcacgccaagagtcac
agcttgtccagcggccggagccaaggtcaagaacatggtcacggcggacaggaaggtcac
acaggttctcgccacaagagaaccgagaggcgcgctgttggtgagggtcgtgctaccgaa
ctgcaggcctcccttctgcagctttctccattgctgtcacctttgtctactccagtgacg
cccctgtcacctctacattccagccagcatgttaattccaggtcacagaacagcagcaaa
agtcatgggctgacctacactcaaacgaaatcacctcaggacctagtggcaggctcacag
gagaatgaaagtcgggacagctcagccgttaacttggctggcaccactcagccttcctcg
cagacctttcccccacctttgccatcaaaaaccagtgcaatgcagcagaaaccaaccgcc
tacgtcaggccgatggatggccaagatcaggccccagtagaatccccggagctcaagcct
ctcccagaggagtaccatacagaaccgtacgagaagatctcagatctgaaggccaacgcc
aaagccaagttatccaagctgaaaatccctgctgagcccattgagcaaaccttccccagt
gatgtccagtgcgttgaagaaatcctgaaggaaatgacccactcatggccacctcctctg
acagctattcatacacctagtacggcagagccctcaaaatttccatttccagcaaaggaa
tcacagcacgttggatctgtagcacagaatcagaaacagtatgacgcaccttcaaaaacg
ttgcctagttctcaaccaagaacatcaatgctccaggacgacctgcagctcagtgatagt
gaagacagtggtgacgaccaagttgttgaaaagccaccttcttcacttgctcctccaagt
gccctgcagtcccagcccgagagcgtggcatcagcacattccagcagcccagagtcaggg
agcaccagtgactcagacagctcttcagactcggagacggagagcagctcgagtgacagt
gaagccaacgaccctgaccctccgagagtgtcagctcctgagcccgacccaccaacttca
aacaagtggcagctcgacaactggctcaccaaggtgaacccaccagcagtgccagcagag
agccccagagaaactgcccatacggatggacatgaggaggacaaggagccaggacagcag
atcgacagcgactcctcccatgagcacgcggagccgagggagcctcatcacaagagctct
gcccgagcagccagggcttctcaggatgctcaccttccgaccaaacgcaactgccagaag
tctcccgcgtgtgctgaggagccctcgcagaggcagaccgttggtatcaaaaggcccagc
aagcctccagtgcacgaggggcccaaggggggcctgaaggtggagagcgaacctggtcct
tacgaggttagagaccagtcttccagagacaagccaaaagtaaaaacgaaagggaggcca
aaatccagcgaccgaaaagaactgaaaaccagtctgcaagagccccccgagggcagaaag
cacaagagctcccatcaggccagcgccaaagccctgctggaccccaagcccccgagggac
gttgtgctgggcagtacccaggagcacctcgctctcagcccagtccctcagggccagggc
acgacccccaccaggactagcggccacaggcctgctgctgtgctcagagaggacttccac
aaggagaagcttcccttgtctgtcagggagaagaagttgctgtcgccagtgagggacgtg
caggtccctcgcagcctcatggttaaaattgatctcccgctgctgtcaagagttccccag
ctccccgggaagggcggtcaccagaagagagcggaggcaaaggagttccctggtgcaagg
gggcaggatgtggagaggaaagccacggacactcctgacaagtccttcaaaaagaggaag
agggaaatggagaaggagattgataggaagaaaatgaaatcagacaaagaaacaaaatca
ttgcagtcttcaactaacaaagactccactaaacagaaagcaccaaaagcatcatttgag
acccagaagaaagatctcctgctacccccaccactgccacccatgtctcccgcacattct
gcaccaaagtcagtgaagatggcccagaagagacccaggagtgagaacggccagctgcct
gccacagaaaacaacactgccagggactcaagcagccacaaggatcctttgtctgccaag
cacaagaaggtggagagaaagcactctgaacaggtgaagggcaacaaaggatctgcaggg
gatgtcacgaatcctttcccagtgccttctttgccaaatggtacctccaagccaaggaga
cctcaagtcaagttcgaaaaacagcattcgatggaatatcacatagaagaggccaagagg
ctgaagcacaaagctgatgcaatgaccgacaagactggaaaggcctttcagtaccttgat
gctgccctttcctttattgaatatgggattgccatggaatcagatgcatcagcaccaaaa
tctgcttacagcatatttgccgacacgatagatctcatcaaattcataatgacattaaaa
ccctttacggacgcctcagcatcttcacatgaaaaaatctttgctgtgttatgcatgcgc
tgccagtccctcctgcacatggcaatgtttcgttacaaaaaggacactgcaataaagtat
tccaggatcctgaatgaccacttcaagagttcttccagagtaacacaagcaccttctcca
tgtgttgcaagaagcacaggcatgccttctcctctttctccaatgccctctcctgctgga
tccgtgagttctcagccaggatcaaacgctagcaattgtggtggcaacagcattagctct
tcggtcaccatcccttataatatcccaagcatcacctcttcatatgtcaacatcacttcc
tatatcctctatgcgtatgacatttgggaacaggctgatgcactggccaggaagaataag
gagttttttgctgagctcagcgcagcggtgtgccctctggcactgaacagtagcatgacc
gaactggtacactacagtagacagggtttacagtggctgagactggagacaaatacgcct
taa
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