KEGG   Anas platyrhynchos (mallard): 101793247
Entry
101793247         CDS       T02816                                 
Symbol
HIF1A
Name
(RefSeq) hypoxia-inducible factor 1-alpha isoform X3
  KO
K08268  hypoxia-inducible factor 1 alpha
Organism
apla  Anas platyrhynchos (mallard)
Pathway
apla04137  Mitophagy - animal
apla04140  Autophagy - animal
apla04148  Efferocytosis
Brite
KEGG Orthology (KO) [BR:apla00001]
 09140 Cellular Processes
  09141 Transport and catabolism
   04140 Autophagy - animal
    101793247 (HIF1A)
   04137 Mitophagy - animal
    101793247 (HIF1A)
   04148 Efferocytosis
    101793247 (HIF1A)
 09180 Brite Hierarchies
  09182 Protein families: genetic information processing
   03000 Transcription factors [BR:apla03000]
    101793247 (HIF1A)
Transcription factors [BR:apla03000]
 Eukaryotic type
  Basic helix-loop-helix (bHLH)
   Factors with PAS domain
    101793247 (HIF1A)
SSDB
Motif
Pfam: bHLH_HIF1A PAS_3 PAS_11 HIF-1a_CTAD PAS HIF-1 PAS_9 PAS_4 HLH
Other DBs
NCBI-GeneID: 101793247
NCBI-ProteinID: XP_005030000
Ensembl: ENSAPLG00000002715
LinkDB
Position
5:6945708..7011588
AA seq 837 aa
MSSTGAALTSATGARVAAAGGLCLKAAGLALACCERLLISSERRKEKSRDAARCRRSKES
EVFYELAHQLPLPHTVSAHLDKASIMRLTISYLRMRKLLDAGELETEAKMEKELNCFYLK
ALDGFVMVLSEDGDMIYMSENVNKCMGLTQFELTGHSVFDFTHPCDHEELREMLTHRNGP
VKKGKEQNTERSFFLRMKCTLTSRGRTVNIKSATWKVLHCTGHIRVYDTCSNQTHCGYKK
PPMTCLVLICEPIPHPSNIEVPLDSKTFLSRHSLDMKFSYCDERITELMGYEPEELLGRS
IYEYYHALDSDHLTKTHHDMFTKGQVTTGQYRMLAKQGGYVWVETQATVIYNTKNSQPQC
IVCVNYVLSGIVQKDLIFSLGQTECMLKPVESPDMKMTKIFNKDDLDDTNNLFEKLKQEP
DALTVLAPAAGDTIISLDFSSNESDEQQCDEVPLYNDVMLPSSSEKLQNINMAMSPLPAS
ETTKPLRSNADPALNREVVSKLEPNTETLELSFTMPQVQEQPTSPSDASTSQSSPEPSSP
NDYCFDVDNDMANEFKLELVEKLFAIDTEAKNPFSTQETDLDLEMLAPYIPMDDDFQLRS
FDQLSPLESSSSSSQNAATITIFQQTQTPSTTADEIKPVAERVDDVKTLIVPSSPVHIIN
DTSSAPASPYGGNRSRTASPIRTGKGTLDQTEKPCPGTPSLLTVTLNKRSTAMDEELNPK
MLALHNAQRKRKMEHDGSLFQAVGIGSLFQQTGDRGGNASLAWKRVKACKTTGHNGVEQK
TIILLSTDIASKLLGQSMDESGLPQLTSYDCEVNAPIQGNRNLLQGEELLRALDQVN
NT seq 2514 nt   +upstreamnt  +downstreamnt
atgtcgagtacgggggctgcgttgacatctgcaactggtgcacgtgtggctgctgctggt
gggctctgcctgaaggctgctggactggctcttgcttgctgtgaaaggctgctgattagt
tctgaacgcaggaaagaaaaatcaagagatgcagctcgatgtcgaagaagcaaggagtcg
gaagtgttctacgaacttgctcatcagctgcctcttccgcacacggtgagcgcccacctt
gacaaggcctccatcatgaggttgaccatcagctacttgcgcatgaggaagctgctggat
gctggtgagctggagacagaagccaaaatggagaaggaactgaactgtttctacctgaaa
gctcttgatggatttgtcatggttctctctgaagatggggacatgatttacatgtctgaa
aatgtgaacaagtgtatgggactcactcagtttgagttgacggggcacagtgtatttgat
ttcactcatccatgtgaccatgaagagctgagagaaatgcttacgcacagaaatggtcct
gtgaaaaagggcaaagaacaaaacacggagcgcagcttttttctcagaatgaagtgcaca
ctgaccagcaggggaagaacagtgaatataaagtctgctacgtggaaggtactgcactgc
accgggcacatccgtgtgtacgacacgtgcagtaatcaaactcactgtggctacaagaag
cctcccatgacgtgcttggtgttgatatgtgaacctattcctcacccatccaacattgag
gtcccactggacagtaaaacgttcctcagtcgtcacagtctcgatatgaagttttcctat
tgtgatgaaagaattacagagctgatgggatatgagccagaggaactcctgggtcgttcc
atctatgagtactaccatgcgctggattctgatcatctgaccaaaacgcaccatgatatg
ttcacaaaagggcaggtgacaacagggcagtacagaatgcttgctaaacaaggtggctat
gtctgggttgaaactcaagcaactgttatatacaacactaagaattctcagccacagtgc
atagtatgtgtaaactatgtgttgagtggaattgttcagaaggacttgatattttccctt
ggacaaactgagtgtatgctgaaaccagtggagtctccagatatgaaaatgaccaaaata
ttcaacaaagatgacctggatgataccaacaacctttttgaaaaacttaaacaggaacca
gatgctttaactgtgctggctccagctgctggagacacaattatctctctagatttcagc
agtaatgagtctgatgaacaacaatgtgatgaagttcctttgtataacgatgtaatgctc
ccctcatccagtgagaaattgcagaatataaatatggcaatgtccccactacctgcctct
gaaactacaaagccacttcgtagcaatgctgatcctgcactcaatagagaagttgtatca
aagctggagccaaacacagagacactcgaactttcttttaccatgcctcaggtgcaagag
cagccaaccagcccttctgatgcaagtaccagccaaagttcacctgagcccagtagtccc
aatgactattgctttgatgtggataatgatatggctaatgagttcaaactggaattagtg
gagaaactctttgcgatagatacagaagcaaaaaatccattctctactcaggaaactgat
ttagacttggagatgttggctccttacatcccgatggatgatgacttccagctacgctcc
tttgatcagctatctccactggaaagcagttcttccagctcccaaaacgcagccactatt
accatatttcagcagactcagacaccatcaactactgctgatgaaataaaaccagtggca
gaacgtgtggatgatgtgaagacgctaattgttccttcatctcctgtccacataatcaat
gacacgagtagtgccccagcgtcaccttacggtgggaacaggagtcgaactgcatctcca
atcagaacaggaaaaggaacattggatcagacagaaaaaccttgtccaggaacacccagt
ttgctaacagtcactctgaataaaagatctactgcaatggatgaagaactaaatccaaag
atgctagctttgcataatgctcagagaaaacgaaaaatggaacatgatggttcacttttt
caggcagttggaattgggtctttattccagcagacaggtgaccgtggaggaaatgcatcg
cttgcttggaaacgtgtaaaggcatgcaaaacaactggtcataatggagtggagcaaaag
acaatcattctattatcaactgacatagcaagtaaacttctagggcagtcgatggatgaa
agtggactaccccaactcacaagttatgattgtgaagtaaatgctcccatacaaggcaac
agaaacctgctacagggggaagaactgctcagagctctggatcaagttaactga

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