Anas platyrhynchos (mallard): 101793424
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Entry
101793424 CDS
T02816
Symbol
OPTC
Name
(RefSeq) opticin isoform X1
KO
K08128
opticin
Organism
apla
Anas platyrhynchos (mallard)
Brite
KEGG Orthology (KO) [BR:
apla00001
]
09180 Brite Hierarchies
09183 Protein families: signaling and cellular processes
00535 Proteoglycans [BR:
apla00535
]
101793424 (OPTC)
Proteoglycans [BR:
apla00535
]
Extracellular matrix (ECM) proteoglycans
Small leucine-rich proteoglycan (SLRP) family
class III
101793424 (OPTC)
SSDB
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GFIT
Motif
Pfam:
LRR_8
LRR_4
LRRNT
LRR_9
LRR_5
LRR_LRWD1
Motif
Other DBs
NCBI-GeneID:
101793424
NCBI-ProteinID:
XP_005026369
Ensembl:
ENSAPLG00000014416
LinkDB
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Position
27
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AA seq
369 aa
AA seq
DB search
MGVSILAVLCAGGSLCKIGAELPHVTLVLPGKLDKHPWGHPAGRRMRPLAWVGIASLCLG
AAWAVPAQEGSRKVEKPKVDLALYENLDLDNYDLTLDSYGDVVDLSNYEELYDYGDIAPK
IEVGTLAPRPKDPEALPKVGTTAPAPKPPPPTSSPVRPAQGLPSCLLCLCIGTSVYCDDA
DLERIPLLPPDTTYLYARFNRISAIRAGDFTGLKKLKRIDLTSNSISWADADAFRLLPSL
QELILPENRLTALPELPRSIVRLDARLNRIPSTGLQPEAFRDLKQLQFLHLSDNQLDYVP
TPLPESLRSLHLQNNNIQTMHKDTFCDSQDHSHIRRALEDIRLDGNPINLSLFPNAYFCL
PRLPTGRFA
NT seq
1110 nt
NT seq
+upstream
nt +downstream
nt
atgggcgttagcatcctcgctgtgctctgtgctgggggcagcttgtgcaaaattggggct
gagctgccccacgtcaccttggtgctcccagggaagctggacaaacatccctgggggcac
ccggctgggcgcaggatgcggcccctggcctgggtgggcatcgccagcctgtgtctgggg
gcagcctgggccgtcccagcccaggaggggagcaggaaggtggagaagcccaaagttgac
ctcgcgctctatgaaaacctggacctggacaactacgacctgacgctggacagctatggg
gacgtggtcgatctgagcaactacgaggagctctacgactacggtgacattgctccgaag
atcgaggtcgggaccctggctccccgccccaaggaccccgaggctctcccaaaggtgggc
accacggctccagcaccaaaaccaccacctccgacctccagccccgtccgccccgcgcag
gggctccccagctgcttgctctgcctctgcatcggcacctcggtctactgcgacgacgcc
gacctggagcgcatcccgctgctgccgccggacaccacctacctctacgcccgcttcaac
cgcatcagcgccatccgggccggcgatttcacggggctgaagaagctgaagcgaatagac
ctgacgagcaattccatctcctgggcggatgcggatgctttccgcctcctgcccagcctg
caggagctcatcctgcccgagaacaggctgacggcgctgcccgagctgccccgcagcatc
gtcaggctggacgcccgtctcaacaggatccccagcaccgggctccagcccgaagctttt
cgggacctgaagcagctgcagttcctccatctgtccgataaccagctggactacgtcccc
acgcccctgcccgagagcctgcgctccctgcacctccagaacaacaacatccagaccatg
cacaaggacacgttctgcgacagccaagaccacagccacatccgcagggcgctggaggac
atccgcctcgatggcaaccccatcaacctcagcctcttccccaacgcctacttctgcctg
ccccgcttgcccacgggacgcttcgcctga
DBGET
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