KEGG T02816: 101793499

Anas platyrhynchos (mallard): 101793499

Entry

101793499         CDS       T02816

Symbol

POLR2D

Name

(RefSeq) DNA-directed RNA polymerase II subunit RPB4

K03012

DNA-directed RNA polymerase II subunit RPB4

Organism

apla Anas platyrhynchos (mallard)

Pathway

apla03020

RNA polymerase

apla03420

Nucleotide excision repair

Brite

KEGG Orthology (KO) [BR:apla00001]
09120 Genetic Information Processing
  09121 Transcription
   03020 RNA polymerase
    101793499 (POLR2D)
  09124 Replication and repair
   03420 Nucleotide excision repair
    101793499 (POLR2D)
09180 Brite Hierarchies
  09182 Protein families: genetic information processing
   03021 Transcription machinery [BR:apla03021]
    101793499 (POLR2D)
   03400 DNA repair and recombination proteins [BR:apla03400]
    101793499 (POLR2D)
Transcription machinery [BR:apla03021]
Eukaryotic type
  RNA polymerase II system
   RNA polymerase II
    Pol II specific subunits
     101793499 (POLR2D)
DNA repair and recombination proteins [BR:apla03400]
Eukaryotic type
  SSBR (single strand breaks repair)
   NER (nucleotide excision repair)
    TCR (transcription coupled repair) factors
     DNA-directed RNA polymerase II complex
      101793499 (POLR2D)

SSDB

Motif

Pfam:

RNA_pol_Rpb4 Tfb4 Maelstrom

Other DBs

NCBI-GeneID:

101793499

NCBI-ProteinID:

XP_027319699

UniProt:

A0A8B9TE03

LinkDB

Position

9:complement(17408176..17411474)

AA seq 142 aa
MAAGGADPRTADVEEDASQLVFPKEFETAETLLNSEVHMLLEHRKQQNESAEDEQELSEV
FMKTLNYTARFSRFKNRETIASVRSLLLQKKLHKFELACLANLCPETAEEAKALIPSLEG
RFEDEELQQILDDIQTKRSFQY

NT seq 429 nt +upstreamnt +downstreamnt
atggcggcgggcggcgccgacccgcgcacggccgatgtggaggaggacgcctcgcagctc
gtcttccccaaggaatttgaaactgcggaaactcttctaaattcagaagtgcacatgctt
cttgagcatcgtaagcaacagaatgagagtgcagaagatgagcaggagctttctgaagtc
ttcatgaaaactttgaattacacagcgcgtttcagccgcttcaaaaaccgtgaaaccatt
gccagtgttcgtagtttgctactccagaaaaagctccataaatttgaactggcatgtttg
gctaacttgtgtcctgagacagctgaggaggccaaagctttgattcctagcctggagggc
cgatttgaagatgaggaattacagcagattcttgacgacattcagactaaacgcagcttc
cagtactaa

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