Anas platyrhynchos (mallard): 101793520
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Entry
101793520 CDS
T02816
Symbol
SMARCA5
Name
(RefSeq) LOW QUALITY PROTEIN: SWI/SNF-related matrix-associated actin-dependent regulator of chromatin subfamily A member 5
KO
K11654
SWI/SNF-related matrix-associated actin-dependent regulator of chromatin subfamily A member 5 [EC:5.6.2.-]
Organism
apla
Anas platyrhynchos (mallard)
Pathway
apla03082
ATP-dependent chromatin remodeling
Brite
KEGG Orthology (KO) [BR:
apla00001
]
09120 Genetic Information Processing
09126 Chromosome
03082 ATP-dependent chromatin remodeling
101793520 (SMARCA5)
09180 Brite Hierarchies
09182 Protein families: genetic information processing
03021 Transcription machinery [BR:
apla03021
]
101793520 (SMARCA5)
03036 Chromosome and associated proteins [BR:
apla03036
]
101793520 (SMARCA5)
Transcription machinery [BR:
apla03021
]
Eukaryotic type
RNA polymerase I system
Other transcription-related factors
NoRC (nucleolar remodeling complex)
101793520 (SMARCA5)
Chromosome and associated proteins [BR:
apla03036
]
Eukaryotic type
Chromatin remodeling factors
CHRAC complex
101793520 (SMARCA5)
RSF complex
101793520 (SMARCA5)
WICH complex
101793520 (SMARCA5)
B-WICH complex
101793520 (SMARCA5)
NORC complex
101793520 (SMARCA5)
BRF complex
101793520 (SMARCA5)
NuRF complex (fruit fly)
101793520 (SMARCA5)
BRITE hierarchy
SSDB
Ortholog
Paralog
Gene cluster
GFIT
Motif
Pfam:
SNF2-rel_dom
SLIDE
HAND
Helicase_C
ResIII
DEAD
HDA2-3
Myb_DNA-binding
DBINO
AAA_14
Motif
Other DBs
NCBI-GeneID:
101793520
NCBI-ProteinID:
XP_027311571
Ensembl:
ENSAPLG00000009206
LinkDB
All DBs
Position
4:complement(35376519..35400428)
Genome browser
AA seq
1052 aa
AA seq
DB search
MSAGQQGTTTTTTPPPPQPDEPPAPPPQPPAPPGAASSEAAGTAPPAAGPAAGDAAMEES
FDDASPGKQKEIQEADPTYEEKMQTDRANRFEYLLKQTELFAHFIQPAAQKTPTSPLKMK
PGRPRIKKDEKQNLLSVGDYRHRRTEQEEDEELLTESSKTTNVCTRFEESPSYVKWGKLR
DYQVRGLNWLISLYENGINGILADEMGLGKTLQTISLLGYMKHYRNIPGPHMVLVPKSTL
HNWMNEFKRWVPTLRAVCLIGDKDQRAAFVRDVLLPGEWDVCVTSYEMLIKEKSVFKKFN
WRYLVIDEAHRIKNEKSKLSEIVREFKTTNRLLLTGTPLQNNLHELWALLNFLLPDVFNS
SEDFDSWFDTNNCLGDQKLVERLHMVLRPFLLRRIKADVEKSLPPKKEVKIYVGLSKMQR
EWYTRILMKDIDILNSAGKLDKMRLLNILMQLRKCCNHPYLFDGAEPGPPYTTDMHLVTN
SGKMVVLDKLLPKLKEQDSRVLIFSQMTRVLDILEDYCMWRNYEYCRLDGQTPHDERQAS
INAYNEPGSSKFVFMLSTRAGGLGINLATADVVILYDSDWNPQVDLQAMDRAHRIGQTKT
VRVFRFITDNTVEERIVERAEMKLRLDSIVIQQGRLVDQNLNKLGKDEMLQMIRHGATHV
FASKESEITDEDIDHILERGAKKTAEMNEKLSKMGESSLRNFTMDTESSVYNFEGEDYRE
KQKMAFTEWIEPPKRERKANYAVDAYFREALRVSEPKAPKAPRPPKQPNVQDFQFFPPRL
FELLEKEILYYRKTIGYKVPRNPDLPNAAQAQKEEQLKIDEAEPLNDEELEEKEKLLTQG
FTNWNKRDFNQFIKANEKWGRDDIENIAREVEGKTPEEVIEYSAVFWERCNELQDIEKIM
AQIERGEARIQRRISIKKALDTKIGRYKAPFHQLRISYGTNKGKNYTEEEDRFLICMLHK
LGFDKENVYDELRQCIRNSPQFRFDWFLKSRTAMELQRRCNTLITLIERENMELEEKEKA
EKKKRGPKPSSAQKRKMDGTPDGRGRKKKLKL
NT seq
3159 nt
NT seq
+upstream
nt +downstream
nt
atgtccgccggccagcaggggacaacgacgacgacaacgccgccgccgccgcaaccggac
gagccgcccgcgccgccgccgcagccgcccgccccgccgggcgccgccagcagcgaggcc
gcggggacggctccccccgccgccggcccggccgcaggcgacgcggcgatggaggaatct
tttgatgatgcatcaccaggaaaacaaaaggaaatccaggaagcagatcccacatatgaa
gagaaaatgcaaacagacagagcaaacagatttgagtatctgttgaagcagactgagctg
tttgctcacttcatccagcctgctgctcagaaaactccaacttcacctttgaaaatgaaa
ccaggacgtccacgaataaagaaggatgagaaacagaatttactgtcagttggcgactac
cgacaccgtagaacagaacaggaagaggacgaggagctgttaacagaaagctccaagaca
acaaatgtctgcactcgatttgaagaatctccatcatatgttaaatggggaaagctgcgt
gattatcaggtccgaggactgaactggctcatttctttgtatgaaaatggcatcaatggt
atcctagcagacgaaatgggtctcgggaagacactgcaaacaatttctcttcttggatat
atgaaacactacagaaatattcctggtcctcacatggtgttagttccaaaatccactcta
cataactggatgaatgaattcaagagatgggtacctacacttcgagcagtgtgtttgata
ggtgacaaagaccagcgagctgcctttgtcagagatgtattgttgccaggagaatgggat
gtctgcgtaacatcatatgaaatgcttatcaaagaaaaatcagtattcaagaagtttaac
tggagatacctagttatagatgaagcccacaggattaaaaatgaaaaatcaaagttatca
gaaattgtgagggaattcaagactacaaatcggctgctattaactggaactccacttcag
aacaacctacatgaactctgggcacttcttaacttccttttgccagatgtctttaactca
tctgaagattttgattcatggtttgatacaaacaactgtctaggggatcaaaagttggtg
gaacgtctccatatggtgctacggccgttcctcctacgtcgcattaaagctgatgtagag
aaaagtttgcctccaaagaaggaagttaaaatttatgtgggtctcagcaaaatgcagcga
gaatggtatacaagaatcttaatgaaggatatagatatattgaattctgctggaaagttg
gacaaaatgagactgctgaatatccttatgcaactacgaaaatgttgcaatcatccatat
ctctttgatggagcagaacctggtccaccttacacaacagatatgcatttggtcaccaac
agtggcaaaatggtagtattggacaaattactgccgaagttgaaagagcaagattcaaga
gtcttaatcttcagccagatgaccagagtcctggacatcttggaagattattgtatgtgg
cgaaattatgaatactgtagattggatggacaaacacctcatgatgagagacaggcttct
attaacgcatacaatgaacctggtagctcaaaatttgtgttcatgttgagtacacgggca
ggaggtcttggaatcaatttggctactgctgatgttgtaattctgtatgattcagactgg
aatccacaagtagatcttcaggctatggatcgagcacacagaattggccaaacaaagact
gtaagagtgttcagatttatcacggacaatacagtggaagaaagaatagtggaacgtgca
gaaatgaaactccggctagattccatagtcatccagcaaggaagactggtggatcaaaac
ttgaataaacttgggaaggatgaaatgctgcaaatgattagacatggagcaacacatgtg
tttgcctcaaaggaaagtgagattacagatgaagatattgatcacattttggaaagaggt
gcaaagaagactgcagaaatgaatgaaaaactttcaaagatgggtgaaagctccctccga
aatttcacaatggatacagagtccagcgtgtataattttgaaggggaggactacagagaa
aaacagaagatggcatttacagagtggattgaaccacctaaacgagaaagaaaagccaat
tatgctgtggatgcttacttcagagaagctcttcgagtcagtgagccaaaagcacccaag
gcaccgcggcctccaaagcagccaaatgtacaggactttcagttctttcctccacggctc
tttgaactgttggaaaaagagattctctactacaggaaaacaatcgggtacaaggtacct
cgtaatcctgatctgcccaatgcagcccaagcacaaaaggaagagcagcttaagattgac
gaggctgaacctcttaatgatgaagaactagaagaaaaagagaagcttctaacccaggga
tttactaactggaataagagagattttaaccagttcatcaaagctaatgagaagtggggc
cgtgatgatattgaaaatatagcacgagaagtagaaggaaaaaccccagaggaagtcatc
gagtattcagctgtgttctgggaaaggtgcaacgaactccaagacattgagaagatcatg
gctcagatagaaagaggagaagccagaattcagagacgaattagcataaaaaaagcactt
gatacaaagattggcagatacaaagcccccttccaccagctaagaatatcatatggtacc
aataaggggaagaattatactgaagaagaggatcgctttctaatctgtatgcttcacaag
ctaggatttgataaggaaaacgtctatgatgaattaagacagtgtatccgaaactcacca
caattcagatttgactggtttctcaagtccagaactgcaatggagctgcaaaggagatgc
aatactttaatcaccctgattgaaagagaaaacatggaactggaagaaaaggaaaaggca
gaaaagaagaaacgtggaccaaaaccatcttcggcacagaagcgcaaaatggatggtact
cctgatggtcgtggaagaaaaaagaagctaaagctgtga
DBGET
integrated database retrieval system
