Anas platyrhynchos (mallard): 101793870
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Entry
101793870 CDS
T02816
Symbol
VPS50
Name
(RefSeq) syndetin
KO
K23288
syndetin
Organism
apla
Anas platyrhynchos (mallard)
Brite
KEGG Orthology (KO) [BR:
apla00001
]
09180 Brite Hierarchies
09182 Protein families: genetic information processing
04131 Membrane trafficking [BR:
apla04131
]
101793870 (VPS50)
Membrane trafficking [BR:
apla04131
]
Protein recycling
Others
EARP complex
101793870 (VPS50)
BRITE hierarchy
SSDB
Ortholog
Paralog
Gene cluster
GFIT
Motif
Pfam:
Vps54_N
Syndetin_C
Motif
Other DBs
NCBI-GeneID:
101793870
NCBI-ProteinID:
XP_038030685
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All DBs
Position
2:complement(139469411..139545796)
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AA seq
967 aa
AA seq
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MQKIKSLMARQGLRSPQESVHDLSPIENLRIPSKEELRESREEQTDPQAQQEIINSIEEV
YFSSDSFDIVKYELERLPPVLSLQELEEYRDKLKQQQAAVSKKVADLILEKQPAYVEELE
RVTSLQTGLQLAAVICANGRRHLNIAKEGFTQTSLGLLANQRKRQLLIGLLKSLRTIKTL
QRTDVRLSEMLEEEDYPGAIQLCLECQKAASTFKHYSCISELNSKLQDTLEQIEEQLDVA
LSKICKNFDISHYTKVQQAYRLLGKTQTAMDQLHMHFTQAIHNTVFQVVLGYVELCAGNT
DTKFQKLQYKDLCTHITSDSYIPCLADLCKALWEVMLSYYRTMQWHENHDQDETATVSSV
SDGSNVIGTEENSFDRSYVKKKLEHGLSRIWQDVQLKVKTYLLGTDLSNFKYDDFIFVLD
VISRLMQVGEEFCGSKSEVLQESIRKQSVNYFKTYHRTRLEELRMFLENETWELCPVKSS
FSILQLHEFKFMEQSRSPSVSPSKQPASAISTAVTLFEQYCNGGNPFEIQADSKDDETED
VLASNGYESDEQEKSAYQEYDSDSDVPEELKRDYVDEQTGDAPMKSVSRETLRSRKRSDY
NLNKVNAPILTNTTLNVVRLVGKYMQMMNILKPIAFDVIHFMSQLFDYYLYAVYTFFGRN
DTFESTGLGLSSSRLRTTLNRIQESLIDLEVSADPAGTLTAAEERKEKVPSPHLSHLVVL
TSGNSLYGLAERVVATESLVFLAEQFEFLQPHLDAVMPAAKKPFLQQFYSQTVSTASELR
KPVYWIVAAKAIDYEQMLLLMTNVKWDVKEIMSQHNVYVDALLKEFEEFNRRLNEVSKRV
RIPLPVSNILWEHCIRLANRTLVEGYANVKKCSNEGRALMQLDFQQFLMKLEKLTDIRPI
PDKEFVETYIKAYYLTENDMERWIKEHREYSTKHLTNLVNVCLGSHINKKARQKLLAAID
DIDRPKR
NT seq
2904 nt
NT seq
+upstream
nt +downstream
nt
atgcagaagatcaagtcgctgatggcccggcagggtctaagaagtcctcaggagagtgtc
catgacctcagtcctattgaaaacttacggattcctagtaaggaggagctcagagaatca
cgggaagaacaaactgatcctcaagctcagcaagaaataattaatagtattgaagaagtt
tatttttccagtgattcctttgatattgtgaagtatgaattagagaggcttcctccagta
cttagtcttcaagaactggaagagtacagagacaaattaaaacaacagcaagctgctgta
tctaagaaagttgcagacttgattcttgaaaagcaacctgcatatgttgaggaacttgag
cgtgttacatcattacagactggtcttcaattagcggctgttatttgcgcaaatggaaga
agacacctgaatatagcaaaggagggattcacacaaactagtttgggacttcttgcaaat
caaaggaaacgacagttgcttattggactgctgaagtctctgagaacaataaaaacgctg
caaagaactgatgtacgcttaagtgagatgctagaggaagaggactatccaggagctatt
cagctgtgcttggaatgccagaaagctgccagcactttcaaacactacagttgtataagt
gagttaaattcaaaactgcaagatactttggagcaaatagaggagcaattggatgtagcg
ctctccaagatatgcaagaactttgatataagtcattacacaaaggttcagcaagcttac
aggctgcttggaaaaacacagacagcaatggaccaattacatatgcatttcactcaagcc
attcacaacactgtgtttcaagtagttcttggatatgtggagctgtgtgcaggaaacaca
gacaccaagtttcagaagttacagtacaaagacctctgtacgcatattacatcagacagc
tacattccatgccttgctgatctctgtaaagccctctgggaagtcatgctcagctattac
cgaacaatgcagtggcatgagaatcatgatcaagatgagacagcaactgtatcttctgtt
tcagatggcagcaatgtgattggaactgaggagaacagtttcgaccgcagctatgtaaaa
aagaaattggaacatgggctttcacgaatatggcaggatgttcaactgaaagtgaaaacg
tatcttctgggaacggatctgtcaaacttcaaatatgatgacttcatatttgtacttgat
gtaatcagcaggctgatgcaagttggagaagaattttgtggcagtaagtctgaagttttg
caagaatctatcagaaaacaaagtgttaactatttcaaaacataccacagaacacgtctt
gaagaattaagaatgtttttggagaacgagacctgggaactttgccctgttaaatccagc
tttagtattttgcagcttcatgaatttaagttcatggagcagtcacgttccccatctgtg
tcacctagtaagcagcctgcttcagcaatttcaacagcagtaactttatttgagcagtac
tgtaatggaggaaacccatttgaaatccaggctgacagcaaagatgatgagacagaagat
gtgttagcttccaatgggtatgaatcggatgaacaagaaaaaagtgcttatcaagagtat
gatagtgacagtgatgttcctgaagagttgaaaagagactatgtagatgagcagacagga
gatgcccctatgaaaagtgtttctcgagaaactctgaggagcagaaagagatcggattat
aacctcaataaagtgaatgcacctatcctaacaaacactacactgaatgtagtaaggctt
gttggtaaatatatgcagatgatgaatattctcaaaccaattgcgtttgatgtgatccac
ttcatgtctcagctcttcgactactatctgtatgcagtctatacgttttttggcagaaat
gacacgtttgaatcaacaggattgggcctcagtagcagcagattacgcacgacactgaac
agaatccaggagagcctcattgatctggaggtctctgctgatcccgcaggaactctcaca
gctgctgaagagagaaaggagaaggtgccaagcccacatctcagtcatctagtagttctg
acgtctggcaactcgctgtatggtttggcagagagagtggtagccacggaatccttggta
tttctggctgagcagtttgagtttcttcaacctcatcttgatgccgtgatgccagctgcc
aagaagccttttcttcagcagttctattctcagacagtgtcaactgccagtgaactacgc
aaaccggtttattggattgttgctgctaaagccattgattacgaacagatgctgcttctc
atgactaatgtaaaatgggatgtgaaggaaatcatgtcacaacacaatgtatacgtagat
gctcttttaaaggaatttgaagaatttaacagaaggttgaatgaagtatctaagagagtc
cgtattccactgccagtctcaaatatcctttgggagcactgcattcgcttagctaataga
actcttgtggaaggttatgctaatgtaaagaaatgcagcaatgaaggacgtgccttgatg
caactggactttcaacagtttttaatgaaactagaaaagttaacagacattaggcccatt
ccagataaagaatttgtggagacctacattaaagcatactacttaacagaaaatgacatg
gagcgctggataaaggagcacagggaatattccactaagcacttgacaaatctggtgaat
gtttgtttgggatcccacatcaacaagaaggcaagacagaagctgctggctgctattgat
gacatagacaggcctaaaagataa
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