KEGG   Anas platyrhynchos (mallard): 101793929
Entry
101793929         CDS       T02816                                 
Symbol
RAE1
Name
(RefSeq) mRNA export factor isoform X1
  KO
K14298  mRNA export factor
Organism
apla  Anas platyrhynchos (mallard)
Pathway
apla03013  Nucleocytoplasmic transport
apla05164  Influenza A
Brite
KEGG Orthology (KO) [BR:apla00001]
 09120 Genetic Information Processing
  09122 Translation
   03013 Nucleocytoplasmic transport
    101793929 (RAE1)
 09160 Human Diseases
  09172 Infectious disease: viral
   05164 Influenza A
    101793929 (RAE1)
 09180 Brite Hierarchies
  09182 Protein families: genetic information processing
   03019 Messenger RNA biogenesis [BR:apla03019]
    101793929 (RAE1)
   03036 Chromosome and associated proteins [BR:apla03036]
    101793929 (RAE1)
Messenger RNA biogenesis [BR:apla03019]
 Eukaryotic type
  mRNA surveillance and transport factors
   Transport factors
    Nuclear pore complex
     101793929 (RAE1)
Chromosome and associated proteins [BR:apla03036]
 Eukaryotic type
  Centrosome formation proteins
   Spindle formation proteins
    101793929 (RAE1)
SSDB
Motif
Pfam: Beta-prop_THOC3 Beta-prop_WDR5 Beta-prop_EML_2 Beta-prop_WDR3_1st WD40 WDR55 WD40_CDC20-Fz WD40_Prp19 WD40_WDHD1_1st Beta-prop_WDR36-Utp21_2nd Beta-prop_WDR3_2nd EIF3I Beta-prop_CAF1B_HIR1 WD40_Gbeta Beta-prop_TEP1_C Beta-prop_TEP1_2nd Beta-prop_EML Beta-prop_RIG_2nd Beta-prop_WDR36-Utp21_1st Beta-prop_Aladin WD40_RFWD3 ANAPC4_WD40 Beta-prop_RSE1_2nd Beta-prop_WDR41 Beta-prop_IFT140_1st Beta-prop_ACSF4 NBCH_WD40
Other DBs
NCBI-GeneID: 101793929
NCBI-ProteinID: XP_027328933
Ensembl: ENSAPLG00000003160
UniProt: R0KCF7
LinkDB
Position
21:complement(9263857..9273283)
AA seq 368 aa
MSLFGSTSGFGTGGTSMFGSTTADNHNPMKDIEVTSPPDDSVSCLAFSPPTLPGNFLIAG
SWANDVRCWEVQDNGQTIPKAQQMHTGPVLDGCWSDDGSKVFTASCDKTAKMWDLNSNQA
IQIAQHDAPVKTIHWIKAPNYSCVMTGSWDKTLKFWDTRSPTPMMTLQLPERCYCADVVH
PMAAVATAERGLIVYQLENQPSEFRRIESPLKHQHRCVAIFKDKVNKPTGFALGSIEGRV
AIHYINPPNPAKDNFTFKCHRSNGTNTSAPQDIYAVNGIAFHPVHGTLATVGSDGRFSFW
DKDARTKLKTSEQLDQPIAACCFNHNGNIFAYASSYDWSKGHEFYNPQKKNYIFLRNAAE
ELKPRNKK
NT seq 1107 nt   +upstreamnt  +downstreamnt
atgagtcttttcgggtcaacctcggggttcgggactggaggtaccagcatgttcggcagt
accaccgcggataaccataacccgatgaaggatattgaagtaacgtctccgcctgatgac
agcgtatcttgtttagcgttcagtccgccaacactgccgggtaacttcctaatagcaggg
tcgtgggcaaatgatgttcgctgctgggaggttcaggataatggacagacaattccaaag
gctcagcagatgcacacagggcctgtactagatggctgctggagcgatgatggaagtaaa
gtatttactgcttcctgtgataaaactgccaaaatgtgggatctcaatagtaatcaagct
attcagattgcacaacatgacgctcctgtgaagactatccactggattaaagcaccaaat
tacagctgtgtgatgacaggaagctgggataaaactttgaagttctgggatacccgctca
ccaacacctatgatgacactgcagctccctgaaagatgttactgtgcagatgtggttcat
cctatggctgctgtggccactgctgaaaggggtttgatagtttatcagttagagaaccaa
ccatctgaattcagaagaatagaatcgcctcttaaacaccagcatcgctgtgttgctatt
tttaaagacaaagtgaacaaacctaccggatttgcccttggaagtattgaaggaagagta
gctattcattatatcaaccccccaaatcctgcaaaagataatttcactttcaaatgtcat
cgctccaatggaacaaacacgtcagcacctcaggatatctatgcggtaaacgggatagca
tttcaccctgtccatggtactcttgcaacagtaggatctgatggtagattcagcttctgg
gataaagatgcacgaacaaagctaaaaacatcagaacaacttgaccagccaatagctgct
tgttgtttcaaccataatgggaatatatttgcatatgcttccagttatgattggtcaaag
ggtcatgaattttataacccacaaaagaaaaactacatttttctgcgaaatgcagcggaa
gagttaaagcctcggaataagaagtaa

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