KEGG   Anas platyrhynchos (mallard): 101794030
Entry
101794030         CDS       T02816                                 
Symbol
RXRA
Name
(RefSeq) retinoic acid receptor RXR-alpha
  KO
K08524  retinoid X receptor alpha
Organism
apla  Anas platyrhynchos (mallard)
Pathway
apla03320  PPAR signaling pathway
apla04148  Efferocytosis
apla04920  Adipocytokine signaling pathway
Brite
KEGG Orthology (KO) [BR:apla00001]
 09140 Cellular Processes
  09141 Transport and catabolism
   04148 Efferocytosis
    101794030 (RXRA)
 09150 Organismal Systems
  09152 Endocrine system
   04920 Adipocytokine signaling pathway
    101794030 (RXRA)
   03320 PPAR signaling pathway
    101794030 (RXRA)
 09180 Brite Hierarchies
  09182 Protein families: genetic information processing
   03000 Transcription factors [BR:apla03000]
    101794030 (RXRA)
  09183 Protein families: signaling and cellular processes
   03310 Nuclear receptors [BR:apla03310]
    101794030 (RXRA)
Transcription factors [BR:apla03000]
 Eukaryotic type
  Zinc finger
   Cys4 hepatocyte nuclear factor 4-like
    101794030 (RXRA)
Nuclear receptors [BR:apla03310]
 2. Hepatocyte nuclear factor 4 like
  2B. Retinoid X receptor (RXR)
   101794030 (RXRA)
SSDB
Motif
Pfam: Hormone_recep Nuc_recep-AF1 zf-C4 tRNA_bind_3 CRT10
Other DBs
NCBI-GeneID: 101794030
NCBI-ProteinID: XP_027326874
Ensembl: ENSAPLG00000013150
LinkDB
Position
18:complement(6229400..6323883)
AA seq 467 aa
MDTKHFLPLDFSNQVNSTSLNSPTSRGPMATPSLHPSIGPGIGSSLGSPGQLHSPISTLS
SPINGMGPPFSVISSPMGPHSMSVPSTPSLGFGTSSPQLNSPMNPVSSSEDIKPPLGLNG
VLKVPAHPSGTMASFTKHICAICGDRSSGKHYGVYSCEGCKGFFKRTVRKDLTYTCRDNK
DCLIDKRQRNRCQYCRYQKCLAMGMKREAVQEERQRGKDRNENEVESTSSANEDMPVEKI
LEAELAVEPKTETYIEANMGLTPSSPNDPVTNICQAADKQLFTLVEWAKRIPHFSELPLD
DQVILLRAGWNELLIASFSHRSIAVKDGILLATGLHVHRNSAHSAGVGAIFDRVLTELVS
KMRDMQMDKTELGCLRAIVLFNPDSKGLSNPAEVEALREKVYASLEAYCKHKYPDQPGRF
AKLLLRLPALRSIGLKCLEHLFFFKLIGDTPIDTFLMEMLEAPHQMT
NT seq 1404 nt   +upstreamnt  +downstreamnt
atggacaccaaacacttcctgccgctggatttctcaaaccaagtcaattccacgtccctg
aactcccccaccagccggggccccatggccaccccctccctccacccgtccatcgggccg
ggcatcggctcctcactgggctccccgggtcagctccactcgcccatcagcaccctgagc
tcgcccatcaacggcatggggccccccttctccgtcatcagctcccccatgggcccgcac
tcgatgtccgtcccctccacgcccagcctgggattcggtaccagcagcccgcagctcaac
tcgcccatgaaccccgtcagcagctccgaagacatcaagccccccctggggctcaacggg
gtcctcaaagtgccagcacatccctcaggaacgatggcctccttcaccaagcacatatgt
gccatctgcggggacaggtcttcaggtaaacattacggggtgtacagctgcgagggctgc
aaaggcttcttcaagcgcacggtgcggaaggacctgacctacacgtgccgcgacaacaag
gactgcctgatcgacaaacgccagcgcaaccgctgccagtactgccgctaccagaagtgt
cttgccatggggatgaagcgagaagctgtccaggaggagaggcagcgggggaaagaccgc
aacgagaacgaggtggagtccacaagtagcgccaacgaggacatgcccgtggaaaagatc
ttggaagctgaactcgccgtggagcccaagacagagacgtacattgaagcgaacatgggc
ttgacgccgagctcgcccaatgacccggtgacgaacatatgccaggcagccgacaagcag
ctcttcaccctggtggagtgggccaagaggatccctcacttctccgagctgcccctggac
gaccaggtcatcctgctccgagcagggtggaatgagctcctaatcgcctccttctcccac
cgctccatagccgtgaaagacgggatcctcttagccaccgggctccacgtgcaccggaac
agcgcgcacagtgctggcgtcggggccatctttgacagagtactgacagaactcgtgtca
aaaatgcgagacatgcagatggacaagacagagctcggctgcctgcgagccattgtcctc
ttcaaccccgactcgaaaggtctctccaacccggccgaagtcgaggcgttacgggagaag
gtgtacgcatcgctagaggcgtactgcaagcacaaataccccgaccagcccgggaggttc
gccaagctcctgctccggctccctgccctccggtccatcggcctgaaatgcctggagcac
ctcttcttcttcaagctaataggcgacacgccgatcgacaccttcttgatggaaatgctg
gaagcgccccatcaaatgacttag

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