Anas platyrhynchos (mallard): 101794030
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Entry
101794030 CDS
T02816
Symbol
RXRA
Name
(RefSeq) retinoic acid receptor RXR-alpha
KO
K08524
retinoid X receptor alpha
Organism
apla
Anas platyrhynchos (mallard)
Pathway
apla03320
PPAR signaling pathway
apla04148
Efferocytosis
apla04920
Adipocytokine signaling pathway
Brite
KEGG Orthology (KO) [BR:
apla00001
]
09140 Cellular Processes
09141 Transport and catabolism
04148 Efferocytosis
101794030 (RXRA)
09150 Organismal Systems
09152 Endocrine system
04920 Adipocytokine signaling pathway
101794030 (RXRA)
03320 PPAR signaling pathway
101794030 (RXRA)
09180 Brite Hierarchies
09182 Protein families: genetic information processing
03000 Transcription factors [BR:
apla03000
]
101794030 (RXRA)
09183 Protein families: signaling and cellular processes
03310 Nuclear receptors [BR:
apla03310
]
101794030 (RXRA)
Transcription factors [BR:
apla03000
]
Eukaryotic type
Zinc finger
Cys4 hepatocyte nuclear factor 4-like
101794030 (RXRA)
Nuclear receptors [BR:
apla03310
]
2. Hepatocyte nuclear factor 4 like
2B. Retinoid X receptor (RXR)
101794030 (RXRA)
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Gene cluster
GFIT
Motif
Pfam:
Hormone_recep
Nuc_recep-AF1
zf-C4
tRNA_bind_3
CRT10
Motif
Other DBs
NCBI-GeneID:
101794030
NCBI-ProteinID:
XP_027326874
Ensembl:
ENSAPLG00000013150
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Position
18:complement(6229400..6323883)
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AA seq
467 aa
AA seq
DB search
MDTKHFLPLDFSNQVNSTSLNSPTSRGPMATPSLHPSIGPGIGSSLGSPGQLHSPISTLS
SPINGMGPPFSVISSPMGPHSMSVPSTPSLGFGTSSPQLNSPMNPVSSSEDIKPPLGLNG
VLKVPAHPSGTMASFTKHICAICGDRSSGKHYGVYSCEGCKGFFKRTVRKDLTYTCRDNK
DCLIDKRQRNRCQYCRYQKCLAMGMKREAVQEERQRGKDRNENEVESTSSANEDMPVEKI
LEAELAVEPKTETYIEANMGLTPSSPNDPVTNICQAADKQLFTLVEWAKRIPHFSELPLD
DQVILLRAGWNELLIASFSHRSIAVKDGILLATGLHVHRNSAHSAGVGAIFDRVLTELVS
KMRDMQMDKTELGCLRAIVLFNPDSKGLSNPAEVEALREKVYASLEAYCKHKYPDQPGRF
AKLLLRLPALRSIGLKCLEHLFFFKLIGDTPIDTFLMEMLEAPHQMT
NT seq
1404 nt
NT seq
+upstream
nt +downstream
nt
atggacaccaaacacttcctgccgctggatttctcaaaccaagtcaattccacgtccctg
aactcccccaccagccggggccccatggccaccccctccctccacccgtccatcgggccg
ggcatcggctcctcactgggctccccgggtcagctccactcgcccatcagcaccctgagc
tcgcccatcaacggcatggggccccccttctccgtcatcagctcccccatgggcccgcac
tcgatgtccgtcccctccacgcccagcctgggattcggtaccagcagcccgcagctcaac
tcgcccatgaaccccgtcagcagctccgaagacatcaagccccccctggggctcaacggg
gtcctcaaagtgccagcacatccctcaggaacgatggcctccttcaccaagcacatatgt
gccatctgcggggacaggtcttcaggtaaacattacggggtgtacagctgcgagggctgc
aaaggcttcttcaagcgcacggtgcggaaggacctgacctacacgtgccgcgacaacaag
gactgcctgatcgacaaacgccagcgcaaccgctgccagtactgccgctaccagaagtgt
cttgccatggggatgaagcgagaagctgtccaggaggagaggcagcgggggaaagaccgc
aacgagaacgaggtggagtccacaagtagcgccaacgaggacatgcccgtggaaaagatc
ttggaagctgaactcgccgtggagcccaagacagagacgtacattgaagcgaacatgggc
ttgacgccgagctcgcccaatgacccggtgacgaacatatgccaggcagccgacaagcag
ctcttcaccctggtggagtgggccaagaggatccctcacttctccgagctgcccctggac
gaccaggtcatcctgctccgagcagggtggaatgagctcctaatcgcctccttctcccac
cgctccatagccgtgaaagacgggatcctcttagccaccgggctccacgtgcaccggaac
agcgcgcacagtgctggcgtcggggccatctttgacagagtactgacagaactcgtgtca
aaaatgcgagacatgcagatggacaagacagagctcggctgcctgcgagccattgtcctc
ttcaaccccgactcgaaaggtctctccaacccggccgaagtcgaggcgttacgggagaag
gtgtacgcatcgctagaggcgtactgcaagcacaaataccccgaccagcccgggaggttc
gccaagctcctgctccggctccctgccctccggtccatcggcctgaaatgcctggagcac
ctcttcttcttcaagctaataggcgacacgccgatcgacaccttcttgatggaaatgctg
gaagcgccccatcaaatgacttag
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