Anas platyrhynchos (mallard): 101794118
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Entry
101794118 CDS
T02816
Symbol
YBX1
Name
(RefSeq) Y-box-binding protein 1 isoform X1
KO
K09276
Y-box-binding protein 1
Organism
apla
Anas platyrhynchos (mallard)
Brite
KEGG Orthology (KO) [BR:
apla00001
]
09180 Brite Hierarchies
09182 Protein families: genetic information processing
03000 Transcription factors [BR:
apla03000
]
101794118 (YBX1)
03019 Messenger RNA biogenesis [BR:
apla03019
]
101794118 (YBX1)
03041 Spliceosome [BR:
apla03041
]
101794118 (YBX1)
Transcription factors [BR:
apla03000
]
Eukaryotic type
beta-Scaffold factors with minor groove contacts
Cold-shock domain factors, YB-1/DbpB-like
101794118 (YBX1)
Messenger RNA biogenesis [BR:
apla03019
]
Eukaryotic type
mRNA surveillance and transport factors
Factors involved in mRNA localization
Other mRNA localization factors
101794118 (YBX1)
mRNA cycle factors
Common to processing body (P body) and stress granule
101794118 (YBX1)
Spliceosome [BR:
apla03041
]
Common components
Common spliceosomal components
General mRNP proteins
101794118 (YBX1)
BRITE hierarchy
SSDB
Ortholog
Paralog
GFIT
Motif
Pfam:
CSD
DUF8529
OB_RNB
S1CSD-TOTE-2
Motif
Other DBs
NCBI-GeneID:
101794118
NCBI-ProteinID:
XP_027299052
LinkDB
All DBs
Position
22:8109714..8119644
Genome browser
AA seq
326 aa
AA seq
DB search
MSSEAETQPPAAPVPAAAPAAAPADSKPNGGTGNGGSGLASAAPPAGGDKKVIATKVLGT
VKWFNVRNGYGFINRNDTKEDVFVHQTAIKKNNPRKYLRSVGDGETVEFDVVEGEKGAEA
ANVTGPGGVPVQGSKYAADRNHYRRYPRRRGPPRNYQQNYQNSESGEKNEGAENIPEGQA
QQRRPYRRRRYPPYYMRRPYGRRPQYSNPPVQGEIVEGADNQGAGEQGRPVRQNMYRGYR
PRFRSLTFRGPPRQRQPREDGNEEDKENQGDETQSQQPPQRRYRRNFNYRRRRPENPKPQ
DGKETKTAEPPAENTSAPEAEQGGAE
NT seq
981 nt
NT seq
+upstream
nt +downstream
nt
atgagcagcgaggccgagacccagccacccgccgcccccgtccccgcggcggcccccgcc
gccgcccccgccgactccaagcccaacggcggcaccgggaacgggggcagcggcctggcc
tcggcggcgcctcccgccggcggggacaagaaggtcatcgcaacgaaggttttgggaaca
gtgaaatggttcaacgtacggaacggttacggcttcatcaacaggaatgacaccaaggaa
gatgtgtttgtccatcagactgccataaagaagaataaccccaggaagtacctccgcagc
gtaggagatggagagaccgtggagtttgatgtggttgaaggagaaaagggtgcggaggca
gctaatgttacaggccctggtggagttccagtgcaaggcagtaaatacgcagcagaccgt
aaccattacagacgatatccacgtcgcaggggtcctccacgcaactaccagcaaaactac
cagaacagtgagagtggggaaaagaatgaaggagcagagaacatcccggaaggccaagcc
cagcaacgtcgcccctaccgcaggcggcggtacccaccttactacatgcgtaggccctac
gggcgtcgaccacaatattccaaccctcccgtgcagggagagatagtggagggtgctgac
aaccagggtgcaggagaacaaggcagaccagtcaggcagaacatgtatcgagggtataga
ccacgatttcgcagcttgactttcaggggtcctcctcgtcaaagacagcccagagaggat
ggaaatgaggaagataaagagaaccaaggggatgagacccaaagtcagcagccacctcaa
cgtcggtaccgtcgtaacttcaactacagacgcagacgcccagagaaccctaaaccacaa
gatggcaaagagacgaagacagccgaaccaccagctgagaacacgtccgctcccgaggcc
gagcagggcggggctgagtaa
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