Anas platyrhynchos (mallard): 101794161
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Entry
101794161 CDS
T02816
Symbol
CACNA1B
Name
(RefSeq) voltage-dependent N-type calcium channel subunit alpha-1B
KO
K04849
voltage-dependent calcium channel N type alpha-1B
Organism
apla
Anas platyrhynchos (mallard)
Pathway
apla04010
MAPK signaling pathway
apla04020
Calcium signaling pathway
Brite
KEGG Orthology (KO) [BR:
apla00001
]
09130 Environmental Information Processing
09132 Signal transduction
04010 MAPK signaling pathway
101794161 (CACNA1B)
04020 Calcium signaling pathway
101794161 (CACNA1B)
09180 Brite Hierarchies
09183 Protein families: signaling and cellular processes
04040 Ion channels [BR:
apla04040
]
101794161 (CACNA1B)
Ion channels [BR:
apla04040
]
Voltage-gated cation channels
Calcium channel, voltage-gated (Cav)
101794161 (CACNA1B)
BRITE hierarchy
SSDB
Ortholog
Paralog
Gene cluster
GFIT
Motif
Pfam:
Ion_trans
GPHH
Ca_chan_IQ
PKD_channel
Motif
Other DBs
NCBI-GeneID:
101794161
NCBI-ProteinID:
XP_038020963
Ensembl:
ENSAPLG00000005963
LinkDB
All DBs
Position
18:2511619..2810109
Genome browser
AA seq
2371 aa
AA seq
DB search
MARFGDDLPTRYGGGGPAGAGRGSSRQGGPQAGQRMYKQSMAQRARTMALYNPIPVKQNC
FTVNRSLFIFSEDNVIRKYAKRITEWPPFEYMILATIIANCIVLALEQHLPDGDKTPMSE
RLDDTEPYFIGIFCFEAGIKIIALGFVFHKGSYLRNGWNVMDFVVVLTGILATAGTDFDL
RTLRAVRVLRPLKLVSGIPSLQVVLKSIMKAMVPLLQIGLLLFFAIVMFAIIGLEFYMGK
FHKTCFSNETGDEVGDFPCGEEPPARQCEVGTTCREYWQGPNYGITNFDNILFAVLTVFQ
CITMEGWTDILYNTNDAAGNTWNWLYFIPLIIIGSFFMLNLVLGVLSGEFAKERERVENR
RAFLKLRRQQQIERELNGYLEWIFKAEEVMLAEEDKNAEEKSPLDGRAASEGPIQQGTAP
AETSSGSSYNMLKRAAIKKSKNDLIHAEEGSPFARASLKSGKNESSSYFRRKEKMFRFFI
RRMVKAQSFYWIVLCVVALNTLCVAMVHYDQPEKLTTALYFAEFVFLGLFLTEMSLKMYG
LGPRNYFHSSFNCFDFGVIVGSIFEVIWAAVKPGTSFGISVLRALRLLRIFKVTKYWNSL
RNLVVSLLNSMKSIISLLFLLFLFIVVFALLGMQLFGGQFNFQDETPTTNFDTFPAAILT
VFQILTGEDWNAVMYHGIESQGGVHSGMFSSIYFIVLTLFGNYTLLNVFLAIAVDNLANA
QELTKDEEEMEEATNQKLALQKAKEVAEVSPMSAANISIAAFVKQTRGTVSRSSSVSSVN
SPKQQNSSKSKSVWEQRTSQIRMHNFRASCEALYNELDPEERVRYATTLHIRPDMKTHLD
RPLVVEPRGEGRNNISKLSPGDVQEVEQSKGSSADGAEAPRKHHRHRDKDKLGEQEKCDV
TKEENGESGTNSKEERHRQHRSRSKEVEGCSKEGKSDRTRGQEGGKRHHRRGSVEEGAEK
EHRRHRTHRHSAERQGKEGNGTINGARGERRSRHRGGSRSGNREGEPCSKGENGEEPHRR
HRFRNRALSTYDSVEKENGEKEGEAGEKEHRNHQPKENQCEIEASGSVSVPVHTLPSTYL
QKVPEQPEDADNQKNVTRMIQPPLDKTTTVNIPVTITAPPGETTVIPMNNVEFESKTEEK
KDVDDLTKNGPKPILPYSSMFILSPTNPIRRLFHYIVNLRYFEMVILIVIALSSIALAAE
DPVQAESPRNDALKYLDYIFTGVFTFEMVIKMIDLGLLLHPGSYFRDLWNILDFIVVSGA
LVAFAFSSFMGGTKGKDINTIKSLRVLRVLRPLKTIKRLPKLKAVFDCVVNSLKNVLNIL
IVYMLFMFIFAVIAVQLFKGRFFYCTDESKELEKDCRGQYLDYEKNEVEAQPREWKKYEF
HYDNVLWALLTLFTVSTGEGWPTVLKHSVDATYEEQGPSPGYRMEMSIFYVVYFVVFPFF
FVNIFVALIIITFQEQGDKVMSECSLEKNERACIDFAISAKPLTRYMPQNKQSFQYKMWK
FVVSPPFEYFIMVMIALNTIVLMMKFYDAPEAYEEMLKCLNIVFTSMFSMECVLKIIAFG
VLNYFRDAWNVFDFVTVLGSITDILVTEIADTDNFINLSFLRLFRAARLIKLLRQGYTIR
ILLWTFVQSFKALPYVCLLIAMLFFIYAIIGMQVFGNIALDDETSINRHNNFRTFLQALM
LLFRSATGEAWHEIMLSCLSNRACDPLSGLTKNECGSDFAYFYFVSFIFLCSFLMLNLFV
AVIMDNFEYLTRDSSILGPHHLDEFVRVWAEYDPAACGRISYTDMYEMLRHMSPPLGLGK
KCPARVAYKRLVRMNMPISPEDLTVHFTSTLMALIRTALEIKLATGGVKQHQCDAELRKE
ISLVWPNLSQKTLDLLVPPHKPDEMTVGKVYAALMIFDFYKQNKNSREQVHQPPGGLCQP
GPVSLFHPLKATLEQTQPAAFSNAKAFLRQKSSASLNNGGTLPPPEGGIKESSSWGTQRT
QDVFYETRTPAFERGHSEEIPIERVVEMREISPTLTNGEHQPGLESQGRAASMPRLAAET
QRSKARSPGSYLAPIPDTSPMKRSISTLTPQRPHAMHLYEYSLERMPTDQVHHHHHHRCH
RRKEKKQKSLDRSPHQLADGEAVAQHGESSSKDKKHERGRSQERKQHSSSSSEKQRFYSC
DRYGSRDRSQPKSADQSRPTSPNGGPEQGPHRQGSGSVNGSPLLSTSGASTPCRGRRQLP
QTPLTPRPSITYKTANSSPVHFTTSPGGLPPFSPGRLSRGLSEHNALLRGDQQPPPAAVA
RIGSDPYLGHRDAADSPCGAAPEDTLTFEEAVATNSGRSSRTSYVSSLTSQSHQARRVPN
GYHYTLGLNTGPGTGARGRSYYHEADEDDWC
NT seq
7116 nt
NT seq
+upstream
nt +downstream
nt
atggctcggttcggggatgatctgccaacacgctatggaggtggagggccagccggggct
ggaagagggagcagccggcaaggtggcccccaggccggccagaggatgtataagcagtcg
atggctcagagagccaggactatggctctctacaaccccatccctgtcaaacagaactgc
ttcacagtcaacagatccctcttcatcttcagtgaagataatgttatacggaaatacgcc
aagcgaataacagaatggcctccatttgaatacatgattttagctacaatcatagccaat
tgtattgtgctggctctggagcaacatttgccggatggagacaagacacctatgtcagag
agattggatgacactgagccgtactttattggaatattttgttttgaagctggtataaag
atcatcgctctggggtttgtttttcacaaaggctcttatctcagaaatggctggaacgtg
atggattttgttgtggtcctcacagggattctggcaactgctgggactgactttgacctg
cggaccctgcgagctgtccgagtgctgcggcccctgaagctggtgtcaggaatcccaagt
ttgcaggttgtcctcaagtccatcatgaaggcgatggtgcccctgcttcagatcgggctg
ctcctcttcttcgccatcgtgatgtttgccatcatcgggctggagttctacatggggaag
tttcacaaaacctgcttctccaacgagacaggcgacgaggtgggagattttccttgcgga
gaggagccccctgccaggcagtgtgaggttgggacgacctgcagggagtactggcaaggg
cccaactacggcatcaccaacttcgacaacatcctctttgctgtgctcaccgtcttccag
tgcatcaccatggagggatggaccgacatcctctacaacacaaatgatgctgcaggaaat
acctggaactggctttacttcatccctctcatcatcattggctctttcttcatgctcaac
ttggtgctgggcgtcctgtcaggtgaatttgccaaagaacgagagagggtagaaaatcgc
cgagctttcctgaaactccgtaggcagcagcaaatagaacgggagctaaatggatacctg
gagtggatcttcaaagcagaggaggtcatgctggctgaggaagacaagaacgcagaagag
aaatctcctctggacgggagggccgcctcggaagggccgattcaacaaggcacggcaccg
gcagagactagcagcggcagcagctacaacatgttgaaaagagctgcaataaagaagagc
aaaaatgacctgattcatgctgaagaagggtctccttttgcccgtgccagtctgaagagt
gggaagaacgagagctcgtcctacttccggaggaaagagaaaatgtttcggttcttcatc
cggcgcatggtgaaagctcagagcttctactggatcgtgctctgcgtggtcgccctcaac
acgctctgcgtggcaatggtgcactacgaccagccggagaagctcaccactgcgctgtat
ttcgcagagtttgtttttctgggtctgttccttactgagatgtctttgaagatgtatgga
ctggggccaagaaattacttccactcttcattcaactgctttgactttggggtcattgtg
ggaagtatctttgaagttatttgggctgcggtgaagcctggtacctcatttggcatcagc
gtactgagagctcttcgactgctgaggattttcaaagtcacaaaatactggaattccctg
aggaatctcgtggtctccttgctgaactccatgaagtccatcatcagtttgctctttctg
ctgttcctcttcatcgtggtgtttgctctgctggggatgcagctctttggaggacaattc
aattttcaagacgaaacaccaaccacaaattttgataccttcccagctgccatcctcacg
gtattccagatcctgacgggggaagactggaacgcggtgatgtaccacggcatagagtca
cagggtggtgtccactcggggatgttctcctccatttacttcatcgtcctgacgttgttt
ggtaactatacgctcctgaacgtcttcttggctatcgccgtggacaatctggcaaatgcc
caagagctgaccaaggatgaggaggagatggaggaagccaccaaccaaaagctcgccctg
caaaaggccaaggaagtagcagaagtcagccccatgtcggcagctaacatttccatagcc
gcttttgtaaagcaaactcgaggtactgtatctcgcagctcgtcagtctccagcgtaaat
tcacccaagcagcagaactcctccaaatccaagtcagtgtgggagcagaggaccagccag
atccggatgcacaatttccgagccagctgcgaggcgctgtacaacgagctggatcctgag
gagcgggtgcgttacgccaccaccctccacatccgtcccgacatgaagacgcatttggac
cggccgctggtggtggagccgaggggcgaagggaggaacaacatcagcaagctgagccct
ggggacgtgcaggaggtggagcagagcaagggcagctctgccgatggagcagaagctcca
cgaaagcatcaccggcatcgggataaggacaaactgggagagcaagagaagtgcgatgtg
accaaggaggagaacggggagtccggcaccaacagtaaggaggagaggcaccggcagcac
aggagccgcagcaaggaggtggaagggtgcagcaaggaagggaaaagtgaccgcaccagg
ggccaggaagggggaaagaggcaccaccgccgagggtcggtggaggaaggtgctgagaag
gagcaccgtaggcatcggactcaccggcactctgctgaaaggcagggcaaggaaggcaac
gggacgatcaacggggcccggggcgagcggcgttcccgacaccggggagggtcgaggtct
gggaaccgggaaggagagccctgttccaagggcgagaacggagaagagcctcacagacgg
cacaggttcaggaacagggcgctgtcgacgtacgattcggtggagaaggagaatggggag
aaggagggggaggctggagagaaggagcaccggaatcatcagcccaaggagaaccagtgt
gagatcgaggctagcggaagcgtgagcgtccccgtgcacacccttcccagcacctacctg
cagaaagtgcccgagcagccagaagatgccgacaaccagaagaacgtgacgcgcatgatt
cagccacctctggacaaaaccaccactgtgaacatccccgtgaccatcactgccccgccg
ggagaaaccactgtcataccaatgaacaacgttgagtttgaaagtaaaacagaggagaag
aaggacgttgatgacttgacaaaaaacgggcctaaaccaatcttgccttacagttccatg
ttcatcctaagtcctacaaacccgattcggcgtctgttccactacattgtcaacctgcgc
tactttgagatggtcatcctcatagtgatagccctcagcagcattgccctggctgcagaa
gaccctgtccaagctgagtcaccgaggaatgatgctctgaaatacttggattatatattt
acgggtgtctttaccttcgagatggtgatcaagatgattgacttggggctgttactgcac
ccaggctcctatttccgtgacctgtggaatatcctggacttcattgtggtcagtggggcc
ttggtggcatttgccttctcgagtttcatgggaggaaccaaaggaaaggacatcaacaca
atcaagtcgctgcgagttctgcgggtcctaagaccactgaagaccattaaacggctgcca
aaactaaaggccgtctttgactgcgtggtgaattccctgaagaatgtcctcaacatcctc
atagtctacatgctcttcatgttcatttttgccgtcattgctgtgcagctcttcaaaggc
agattcttctactgcactgatgagtcgaaggagctggagaaggactgcaggggtcagtac
cttgactatgaaaaaaatgaggtggaggcacagcccagggaatggaaaaagtacgagttc
cactacgacaacgtgctgtgggctctgctgacgcttttcaccgtctccacgggagaaggg
tggccaactgtattgaagcattcagtggatgctacctacgaggaacagggtcccagccct
ggctaccgaatggaaatgtctatcttttacgtggtgtattttgttgtcttcccttttttc
tttgtgaacatctttgtggcgttaatcatcatcaccttccaagagcaaggagataaagtg
atgtcagaatgcagcctagagaaaaacgagagggcctgcatagacttcgccataagtgcc
aagccgctgacccgctacatgcctcagaacaagcaatcttttcagtacaagatgtggaaa
tttgtggtgtcccctccctttgagtactttatcatggtcatgattgctctcaatactatt
gttctcatgatgaagttctatgatgctccagaagcatatgaagaaatgttgaaatgcctg
aatattgtgtttacgtccatgttttcaatggaatgtgtgctgaagatcattgcctttggt
gtgctgaattatttccgagatgcctggaatgtctttgattttgtaacagtgttgggaagt
attactgatattttagtaacagagattgcggacacggacaacttcatcaacctcagcttc
ctgcggctcttcagggcagccagacttatcaagctcctccgccagggttacactatccgc
atcttgctctggacgtttgtgcagtcctttaaggccttgccttatgtgtgtctcctcatt
gcaatgctcttcttcatctatgccattattggcatgcaggtatttggaaacattgcgctg
gatgacgagacctccatcaatcggcacaataatttccgtaccttcctgcaagccttgatg
cttctgtttaggagcgccacgggggaggcctggcacgagatcatgctgtcgtgcctgagc
aaccgggcctgcgacccgctctccggcctcaccaagaacgagtgcggcagcgactttgcc
tacttctacttcgtgtccttcatcttcctctgctccttcctgatgttgaacctctttgtg
gctgtgattatggacaactttgaatacctgacaagagactcctccatccttgggccccat
catttggatgagtttgttcgtgtctgggctgaatatgacccagctgcctgcgggcgcatc
agttacacagacatgtatgagatgctgagacacatgtccccacctctaggccttggaaag
aaatgccctgctcgcgttgcctataagcgcctggtgcggatgaacatgcccatctcgccc
gaggacctgacggtccacttcacgtccacgctgatggccctgatccgcaccgccctggaa
atcaaactcgccacagggggtgtcaagcagcaccagtgtgatgctgagctgagaaaggag
atctcactggtttggcccaatctgtcccagaagacgctggacttgctggtgcctcctcac
aaacccgatgagatgactgtggggaaggtctacgcagcgctcatgatattcgacttctac
aaacagaacaagaacagcagggaacaagtccaccagcctccggggggcctgtgccagcct
ggcccggtgtcgctcttccaccccctgaaggccaccctggagcagacccagcccgcagcg
ttcagcaacgcaaaggcgttcctccgccagaaaagctcggcatcgctcaacaacgggggc
acactgccacccccagagggtggaatcaaagagtccagctcctgggggacccagcgcacc
caggacgtgttttatgaaaccaggacaccagcttttgaacgaggccactcagaagaaatc
cctattgagcgggtggtggaaatgagggaaatcagccccactctcaccaacggagagcac
cagccgggtctggagagccaggggcgggcggcttccatgccgcgcctggctgccgaaact
cagaggagcaaagcacggtcacctgggagttacctagcacccatcccggacacgagcccc
atgaagcgctccatctccacgctgaccccgcagcgcccgcacgccatgcacctctacgag
tactccctggagcgcatgccgaccgaccaggtgcaccaccaccaccaccaccgctgccac
cggcggaaagagaagaagcagaagtccttggacaggtccccgcaccagctggccgatggg
gaagccgtggcccagcatggtgagtcttcttccaaggacaagaagcatgagcgcggccgg
tcccaagagaggaagcagcactcctcctcctcctccgaaaagcagcgcttctactcctgc
gaccgctacggcagccgggaccgctcccagcccaaatctgccgatcagagcaggcccacc
tcgcccaacggggggcccgagcaaggcccgcacagacagggcagtggttcggttaacggg
agccccttgctgtcgacatctggtgctagtaccccctgccggggtcggaggcagctcccg
cagacccccctgaccccacgccccagcatcacttacaagaccgccaactcctcgcccgtc
cacttcaccacctccccgggcggcctgccccctttctccccgggacgcctgagccgcggt
ctgtccgagcacaacgcgctgctgcggggggaccagcagccgcccccggccgcggtggcc
cgcatcggctccgacccctacctgggccaccgcgacgccgccgacagcccctgcggcgcg
gcgcccgaggacacgctcaccttcgaggaggcggtggccaccaactcggggcgttcctcc
aggacttcttacgtctcctccttgacctcccagtctcaccaagctcgccgggtgcccaac
ggctaccactacacgctggggctcaacacgggccccggcaccggcgcccggggacggagc
tactaccacgaagccgacgaggacgactggtgctag
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