Anas platyrhynchos (mallard): 101794269
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Entry
101794269 CDS
T02816
Symbol
PRPF38B
Name
(RefSeq) pre-mRNA-splicing factor 38B
KO
K12850
pre-mRNA-splicing factor 38B
Organism
apla
Anas platyrhynchos (mallard)
Pathway
apla03040
Spliceosome
Brite
KEGG Orthology (KO) [BR:
apla00001
]
09120 Genetic Information Processing
09121 Transcription
03040 Spliceosome
101794269 (PRPF38B)
09180 Brite Hierarchies
09182 Protein families: genetic information processing
03041 Spliceosome [BR:
apla03041
]
101794269 (PRPF38B)
Spliceosome [BR:
apla03041
]
Complex B
U4/U6.U5 tri-snRNP components
U4/U6.U5 tri-snRNP related factors
101794269 (PRPF38B)
Complex C
U4/U6.U5 tri-SnRNP related factors
101794269 (PRPF38B)
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SSDB
Ortholog
Paralog
Gene cluster
GFIT
Motif
Pfam:
PRP38
PRP38_assoc
Motif
Other DBs
NCBI-GeneID:
101794269
NCBI-ProteinID:
XP_012963195
Ensembl:
ENSAPLG00000006527
UniProt:
A0A8B9R561
R0L434
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All DBs
Position
8:5553863..5562868
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AA seq
549 aa
AA seq
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MANNSPAVGAGNCQGQQAAQHQAGAAAPGQQQLQSGAPKPAASGKQGNVLPLWGNEKTMN
LNPMILTNILSSPYFKVQLYELKTYHEVVDEIYFKVTHVEPWEKGSRKTAGQTGMCGGVR
GVGTGGIVSTAFCLLYKLFTLKLTRKQVMGLITHTDSPYIRALGFMYIRYTQPPTDLWDW
FESFLDDEEDLDVKAGGGCVMTIGEMLRSFLTKLEWFSTLFPRIPVPVQKTIDQQIKSRP
RKIKKDGKEGMEEIDRHVERRRSRSPRRSISPRRSPRRSRSRSHHREPHGSSSFDRELER
ERERQRLEREAKEREKERRRSRSTDRALERRRSRSRERYRSRSRSRDRKGDRRDRDRERE
KENERSRKKERDYDKERGSEREKDSDRSRERSKERRSKGDPEERRHKDDKDDKKHRDDKR
DSKKERKHSRSRSRERKHRSRSRSKNTGKRSRSRSKEKSSKHKSESKEKSNKRSRSRSRG
RTDSVEKSKKRDHSPSKERSRKRSRSKDRSHKHDPSDSKDHSDKHDRRRSQSTERESQEK
QHKNKDETV
NT seq
1650 nt
NT seq
+upstream
nt +downstream
nt
atggccaacaacagccccgccgtgggcgccggcaactgccaggggcagcaggcggcgcag
caccaggccggcgccgccgccccgggccagcagcagctgcagagcggcgccccgaagccg
gcggcctccggcaagcagggcaacgtgctgccgctgtggggcaacgagaagaccatgaac
ctcaaccccatgatcctcaccaacatcctctcctcgccatacttcaaggtgcagctctac
gagctcaagacgtaccacgaggtggtggacgagatctacttcaaggttacgcatgttgaa
ccatgggaaaaggggagtagaaaaacagcaggccagacaggaatgtgtggaggggtccgt
ggtgttggaactggaggaattgtgtccactgccttttgtctgctctacaaattatttaca
ctgaagctgacccgtaagcaagtgatgggccttataactcatacagactctccatatatt
agggctcttggatttatgtatattaggtacacacaaccacctacagatctatgggactgg
tttgaatcctttcttgatgatgaagaggacttggacgtgaaggcaggtgggggctgtgtt
atgaccatcggggagatgcttcgttccttccttactaagctggaatggttttccacgttg
tttccaagaattcctgtgccagtccagaaaactatcgaccaacaaattaaaagcagaccc
agaaaaatcaagaaagatggcaaggagggaatggaagaaatagaccggcatgtagaacgt
agacgttcaaggtctccaaggcgatccatcagtcccaggaggtctcccagaagatccaga
agcagaagtcatcaccgggaaccccatggatcatctagctttgacagagagctagaaaga
gagagggaacggcagagattagaacgtgaagctaaggagagagaaaaagaaaggcggaga
tctcgaagcactgatcgcgcgctagaacggagacgaagcagaagcagggaacggtacaga
agccgtagtcggagtcgtgacaggaaaggagatagacgagacagggacagggagcgagag
aaagagaatgaacgcagccggaaaaaagagagagattatgacaaggagagaggtagcgag
agggaaaaagatagtgatcggtctagagaaagatcaaaagaaaggagaagtaagggtgat
ccagaagagagaagacacaaggatgacaaagatgacaagaaacaccgggatgataagagg
gattccaaaaaagagagaaaacatagtagaagtcgaagccgggaaagaaagcataggagt
agaagtcgaagtaagaatacaggtaagcgcagcagaagcaggagcaaagagaaatcaagt
aaacataaaagcgaaagcaaagagaaatcaaataaacgaagtaggagcagaagcagagga
agaacagatagtgtcgagaagtccaaaaaacgagaccacagtcccagtaaagaaagatct
agaaagcgtagtagaagcaaagaccgttcccacaaacatgatcccagtgatagcaaggac
cattcagacaaacacgatcgtcgaaggagccaaagtacagagcgagagagccaagaaaag
caacacaaaaacaaagatgagactgtgtga
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