KEGG   Anas platyrhynchos (mallard): 101794269
Entry
101794269         CDS       T02816                                 
Symbol
PRPF38B
Name
(RefSeq) pre-mRNA-splicing factor 38B
  KO
K12850  pre-mRNA-splicing factor 38B
Organism
apla  Anas platyrhynchos (mallard)
Pathway
apla03040  Spliceosome
Brite
KEGG Orthology (KO) [BR:apla00001]
 09120 Genetic Information Processing
  09121 Transcription
   03040 Spliceosome
    101794269 (PRPF38B)
 09180 Brite Hierarchies
  09182 Protein families: genetic information processing
   03041 Spliceosome [BR:apla03041]
    101794269 (PRPF38B)
Spliceosome [BR:apla03041]
 Complex B
  U4/U6.U5 tri-snRNP components
   U4/U6.U5 tri-snRNP related factors
    101794269 (PRPF38B)
 Complex C
   U4/U6.U5 tri-SnRNP related factors
    101794269 (PRPF38B)
SSDB
Motif
Pfam: PRP38 PRP38_assoc
Other DBs
NCBI-GeneID: 101794269
NCBI-ProteinID: XP_012963195
Ensembl: ENSAPLG00000006527
UniProt: A0A8B9R561 R0L434
LinkDB
Position
8:5553863..5562868
AA seq 549 aa
MANNSPAVGAGNCQGQQAAQHQAGAAAPGQQQLQSGAPKPAASGKQGNVLPLWGNEKTMN
LNPMILTNILSSPYFKVQLYELKTYHEVVDEIYFKVTHVEPWEKGSRKTAGQTGMCGGVR
GVGTGGIVSTAFCLLYKLFTLKLTRKQVMGLITHTDSPYIRALGFMYIRYTQPPTDLWDW
FESFLDDEEDLDVKAGGGCVMTIGEMLRSFLTKLEWFSTLFPRIPVPVQKTIDQQIKSRP
RKIKKDGKEGMEEIDRHVERRRSRSPRRSISPRRSPRRSRSRSHHREPHGSSSFDRELER
ERERQRLEREAKEREKERRRSRSTDRALERRRSRSRERYRSRSRSRDRKGDRRDRDRERE
KENERSRKKERDYDKERGSEREKDSDRSRERSKERRSKGDPEERRHKDDKDDKKHRDDKR
DSKKERKHSRSRSRERKHRSRSRSKNTGKRSRSRSKEKSSKHKSESKEKSNKRSRSRSRG
RTDSVEKSKKRDHSPSKERSRKRSRSKDRSHKHDPSDSKDHSDKHDRRRSQSTERESQEK
QHKNKDETV
NT seq 1650 nt   +upstreamnt  +downstreamnt
atggccaacaacagccccgccgtgggcgccggcaactgccaggggcagcaggcggcgcag
caccaggccggcgccgccgccccgggccagcagcagctgcagagcggcgccccgaagccg
gcggcctccggcaagcagggcaacgtgctgccgctgtggggcaacgagaagaccatgaac
ctcaaccccatgatcctcaccaacatcctctcctcgccatacttcaaggtgcagctctac
gagctcaagacgtaccacgaggtggtggacgagatctacttcaaggttacgcatgttgaa
ccatgggaaaaggggagtagaaaaacagcaggccagacaggaatgtgtggaggggtccgt
ggtgttggaactggaggaattgtgtccactgccttttgtctgctctacaaattatttaca
ctgaagctgacccgtaagcaagtgatgggccttataactcatacagactctccatatatt
agggctcttggatttatgtatattaggtacacacaaccacctacagatctatgggactgg
tttgaatcctttcttgatgatgaagaggacttggacgtgaaggcaggtgggggctgtgtt
atgaccatcggggagatgcttcgttccttccttactaagctggaatggttttccacgttg
tttccaagaattcctgtgccagtccagaaaactatcgaccaacaaattaaaagcagaccc
agaaaaatcaagaaagatggcaaggagggaatggaagaaatagaccggcatgtagaacgt
agacgttcaaggtctccaaggcgatccatcagtcccaggaggtctcccagaagatccaga
agcagaagtcatcaccgggaaccccatggatcatctagctttgacagagagctagaaaga
gagagggaacggcagagattagaacgtgaagctaaggagagagaaaaagaaaggcggaga
tctcgaagcactgatcgcgcgctagaacggagacgaagcagaagcagggaacggtacaga
agccgtagtcggagtcgtgacaggaaaggagatagacgagacagggacagggagcgagag
aaagagaatgaacgcagccggaaaaaagagagagattatgacaaggagagaggtagcgag
agggaaaaagatagtgatcggtctagagaaagatcaaaagaaaggagaagtaagggtgat
ccagaagagagaagacacaaggatgacaaagatgacaagaaacaccgggatgataagagg
gattccaaaaaagagagaaaacatagtagaagtcgaagccgggaaagaaagcataggagt
agaagtcgaagtaagaatacaggtaagcgcagcagaagcaggagcaaagagaaatcaagt
aaacataaaagcgaaagcaaagagaaatcaaataaacgaagtaggagcagaagcagagga
agaacagatagtgtcgagaagtccaaaaaacgagaccacagtcccagtaaagaaagatct
agaaagcgtagtagaagcaaagaccgttcccacaaacatgatcccagtgatagcaaggac
cattcagacaaacacgatcgtcgaaggagccaaagtacagagcgagagagccaagaaaag
caacacaaaaacaaagatgagactgtgtga

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