Anas platyrhynchos (mallard): 101794350
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Entry
101794350 CDS
T02816
Symbol
DDX1
Name
(RefSeq) ATP-dependent RNA helicase DDX1
KO
K13177
ATP-dependent RNA helicase DDX1 [EC:
5.6.2.7
]
Organism
apla
Anas platyrhynchos (mallard)
Brite
KEGG Orthology (KO) [BR:
apla00001
]
09180 Brite Hierarchies
09182 Protein families: genetic information processing
03041 Spliceosome [BR:
apla03041
]
101794350 (DDX1)
03016 Transfer RNA biogenesis [BR:
apla03016
]
101794350 (DDX1)
Enzymes [BR:
apla01000
]
5. Isomerases
5.6 Isomerases altering macromolecular conformation
5.6.2 Enzymes altering nucleic acid conformation
5.6.2.7 DEAD-box RNA helicase
101794350 (DDX1)
Spliceosome [BR:
apla03041
]
Other splicing related proteins
Spliceosome associated proteins (SAPs)
RNA helicase-like proteins
101794350 (DDX1)
Transfer RNA biogenesis [BR:
apla03016
]
Eukaryotic type
tRNA spricing factors
tRNA splicing ligase complex
101794350 (DDX1)
BRITE hierarchy
SSDB
Ortholog
Paralog
Gene cluster
GFIT
Motif
Pfam:
DEAD
Helicase_C
SPRY
ResIII
CMS1
SNF2-rel_dom
Motif
Other DBs
NCBI-GeneID:
101794350
NCBI-ProteinID:
XP_027311055
Ensembl:
ENSAPLG00000011093
UniProt:
A0A7H0TIK0
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All DBs
Position
3:106609192..106628493
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AA seq
740 aa
AA seq
DB search
MAAFSEMGVMPEIAQAVEEMDWLLPTDIQAESIPLILGGGDVLMAAETGSGKTGAFSIPV
IQIVYETLKDQMEGKKGKATIKTGGAVLNKWQMNPYDRGSAFAIGSDGLCCQSREVKEWH
GCRATRGVTKGKYYYEVSCHDQGLCRVGWSTMQASLDLGTDKFGFGFGGTGKKSHNKQFD
SYGEEFTMHDTIGCYLDLDKGQIKFSKNGKDLGLAFEIPPHIRNQALFAACVLKNAELKF
NFGEEDFKFPPKDGYIGLCKAPDGSVVKSQHAGNAQVVQTQNLPNAPKALIVEPSRELAE
QTLNNVKQFKKYVDNPKLRELLIIGGVAARDQLSVLEQGVDIVVGTPGRLDDLVSTGKLN
LSQVRFLVLDEADGLLLQGYSDFINRIHSQIPQITSDGKRLQVIVCSATLHSFDVKKLSE
KIMHFPTWVDLKGEDSVPETVHHVVVPVNPKADKLWERLGKNHIRTDEVHAKDNTRPGAN
TPEMWSEAIKILKGEYTVRAIKEHKMDQAIIFCRTKIDCDNMEQYFIQQGGGPDRKGHQF
SCVCLHGDRKPQERKQNLERFKRGDVRFLICTDVAARGIDIHGVPYVINVTLPDEKQNYV
HRIGRVGRAERMGLAISLVAKEKEKVWYHVCSSRGKGCYNTRLKEEGGCTIWYNEMQLLG
EIEEHLNCTIAQIEPDIKVPVDDFDGKVTYGQKRALGGGLYKGHVDILAPTVQELAALEK
EAQTSFLHLGYLPNQLFRTF
NT seq
2223 nt
NT seq
+upstream
nt +downstream
nt
atggcggcgttctcggaaatgggtgttatgcctgagatagctcaagcagtggaggagatg
gattggcttcttcctacagatattcaagcagaatctatcccattgatcctgggaggtggt
gatgtgcttatggctgcagaaacgggcagtggaaaaactggtgcttttagcattccagtt
atccagattgtttatgaaacactgaaggaccagatggaagggaagaaagggaaagcaact
attaaaactggtggagcagtgctcaataaatggcagatgaacccatatgatagaggatca
gcttttgcaattggatcagatggtctgtgttgccaaagcagggaagtaaaagaatggcat
ggatgcagagcaactagaggcgtgactaaaggaaaatactactatgaagtgtcttgtcat
gaccaaggcttgtgcagagttggttggtcaactatgcaggcatcactagatttgggcact
gataaatttggctttggatttggtggcactggtaagaaatctcacaataagcaatttgac
agctatggtgaggaattcactatgcatgatacaattggatgttatctagatttagataaa
ggacaaataaaattttccaaaaatgggaaagaccttggccttgcgtttgaaatcccacca
cacataaggaaccaggcactctttgcagcttgtgtgctgaagaatgctgaattaaaattc
aattttggcgaagaagacttcaagtttcccccaaaagatggctatattggactctgcaag
gctcccgatggtagtgttgtaaaatcacaacatgcaggaaatgcacaagtggttcaaaca
cagaaccttccaaatgctccaaaagcattgattgttgaaccatctagagagctagcagaa
caaactttgaacaatgtgaagcagttcaaaaaatatgttgataatcccaaattaagggaa
ctgctgattattggtggggttgctgcaagagatcaactctctgtgctggaacaaggagtg
gatattgttgttggaactcctggaagactggatgacctggtctcaacaggaaagcttaat
ttatctcaagttagattcctcgttctggatgaagctgatggccttcttctccaaggttat
tcagacttcataaacaggatccatagtcaaattcctcagatcacttcagatggaaagcga
cttcaggtgatcgtgtgttctgcaacactgcattcttttgatgtgaaaaagctgtctgaa
aagatcatgcattttcccacctgggttgatctaaaaggagaagattctgtccctgaaact
gtacaccatgtagttgtgcctgttaatccaaaagctgataaactctgggaaagacttggc
aagaatcatatcagaactgacgaagtacatgcaaaagacaatacacgtcctggtgctaac
actccagaaatgtggtctgaagctatcaaaattctgaagggagagtacactgttcgggca
atcaaagagcacaagatggatcaagccattattttctgcaggacgaaaatagattgtgat
aatatggagcagtacttcatccaacagggcggaggccctgataggaagggacatcagttc
tcatgtgtctgtctgcatggtgacagaaaacctcaagaaagaaaacagaacctggaaaga
tttaagaggggagatgtccgtttcttgatctgcacggacgttgcagctagaggaattgat
attcatggtgttccctatgttatcaacgtcacactccctgatgaaaaacagaactatgtt
caccgaattgggagagtaggccgagctgaaaggatgggtctggcaatctcccttgtggca
aaagaaaaagaaaaggtttggtatcatgtatgcagtagtcgtggaaaaggatgttacaat
actagactgaaggaagaaggaggttgtactatatggtacaatgagatgcagttgctgggg
gagattgaagaacacttaaactgcactattgcccaaattgaaccagacataaaagtgcca
gtagatgactttgatgggaaggttacatatgggcagaaaagagcgcttggtggtggactc
tataaaggccatgtggatattctggcgcctacagtacaagagttggctgcccttgaaaag
gaggctcagacatctttcttgcatcttggctatcttcctaaccagctgttcagaacattc
tga
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