Anas platyrhynchos (mallard): 101794472
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Entry
101794472 CDS
T02816
Symbol
TRPC1
Name
(RefSeq) short transient receptor potential channel 1 isoform X1
KO
K04964
transient receptor potential cation channel subfamily C member 1
Organism
apla
Anas platyrhynchos (mallard)
Brite
KEGG Orthology (KO) [BR:
apla00001
]
09180 Brite Hierarchies
09183 Protein families: signaling and cellular processes
04040 Ion channels [BR:
apla04040
]
101794472 (TRPC1)
Ion channels [BR:
apla04040
]
Voltage-gated cation channels
Transient receptor potential channel (TRP)
101794472 (TRPC1)
BRITE hierarchy
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Ortholog
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Gene cluster
GFIT
Motif
Pfam:
TRP_2
Ion_trans
Ank_2
Ank_4
Dsc3_C
MTR4-like_stalk
LHD_TRPY1
RIN1
Motif
Other DBs
NCBI-GeneID:
101794472
NCBI-ProteinID:
XP_038039344
Ensembl:
ENSAPLG00000002664
LinkDB
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Position
9:24211945..24234017
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AA seq
782 aa
AA seq
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MAALYQSADPSASASPNKLLALKDVRQVKEETTLDEKLFLLACDKGDYYMVKKLLEENSS
GEMNINCVDVLGRNAVTITIENENLDILQLLLDYGCQSSDALLVAIDSEVVGAVDILLNH
RPKRSSRPTIVKLMERIQNPEYSTTMDVAPVILAAHRNNYEILTMLLKQDISLPKPHAVG
CECTLCTAKNKKDSLRHSRFRLDIYRCLASPALIMLTEEDPILRAFELSADLKELSLVEV
EFRNDYEELAQQCKTFAKDLLAQARNSRELEVILNHTSSDEHVDKRGLLEERMNLSRLKL
AIKYNQKEFVAQSNCQQFLNTVWFGQMAGYRRKHTCKKILTVLMVGVFWPVLSLCYLLAP
KSRVGRIIHTPFMKFIIHGASYFTFLLLLNLYSLVYNEDKKNTMGPALERIDYLLIIWLI
GMVWSDVKRLWYDGLEDFLEESRNQLSFVMNSLYLATFALKVVAHNKFHDYAERKDWDAF
HPTLVAEGLFAFANVLSYLRLFFMYTTSSILGPLQISMGQMLQDFGKFLGMFLLVLFSFT
IGLTQLYDKGFTVNEEERDCAGIFCEKQSNDTFHSFIGTCFALFWYIFSLAHVAIFVTRF
SYGEELQSFVGAVIVGTYNVVVVIVLTKLLVAMLHKSFQLIANHEDKEWKFARAKLWLSY
FDDKCTLPPPFNVIPSPKTICYLFNSLSKWICSHTSSGKVKRQNSLKEWRNLKQKRDENY
QKVMCCLVHRYLTSMRQKMQSTDQATVENLNELRQDLSKFRNEMRDLLGFRTSKYAMFYP
RN
NT seq
2349 nt
NT seq
+upstream
nt +downstream
nt
atggccgccctgtaccagagcgcggacccgtccgcctcggcctcgccgaacaagctgctg
gcgctgaaggacgtgcggcaggtgaaggaggagaccaccctggacgagaagctcttcctc
ctggcctgcgacaaaggtgactactacatggttaagaaactcttagaggaaaacagctcg
ggtgaaatgaacataaactgtgtggatgtgcttggaagaaatgctgttaccataaccatt
gaaaatgaaaatttggatattctacagcttcttctggattatggctgccagtcatcagat
gcacttttggtggctattgactcagaagtggtgggagctgttgacattctacttaatcac
cggccaaaaagatcttccagaccaaccattgtaaaactcatggaacgcattcagaaccca
gagtactcaacaaccatggatgtggcacctgtcattttagctgctcatcgtaataactat
gaaattctcaccatgctgttaaagcaagatatatcgctacccaaacctcacgctgtaggc
tgtgaatgcacactctgtactgcaaaaaacaaaaaagatagtctgcgacattccaggttt
cgtcttgacatttaccggtgtttggccagtcctgctttaataatgttaacggaggaggat
ccaattctgcgagcttttgaacttagtgcagacttgaaagaattaagtcttgttgaggtt
gaattcagaaatgattatgaggagctagctcaacagtgcaaaacctttgctaaagacttg
ctcgcacaagcacggaattcacgggagctggaagttattctgaatcatacatctagtgat
gaacatgtagacaagcgaggattgttggaagagaggatgaacttaagtcgcttaaaactg
gcaatcaaatataatcaaaaagagtttgttgctcagtctaactgccagcagtttcttaac
actgtgtggtttggacagatggcaggctatcgacgcaagcacacgtgcaaaaaaattttg
actgttttgatggttggagttttctggccagttctgtccctgtgttacttgttagcccct
aaatctcgagtaggtcgaataattcacactccttttatgaagtttattattcatggagct
tcatatttcacatttcttttattacttaatttgtactccctcgtctataatgaggataag
aagaatacaatggggccagcccttgagagaatagactatcttctgataatatggctaatt
ggaatggtgtggtcagatgttaaaagactctggtatgatggtttagaagacttcttagaa
gagtcccgtaatcagcttagttttgttatgaattccctttatttggcaacttttgctctg
aaagtagttgcacataacaagtttcatgattatgctgaaagaaaggattgggatgcattc
catcctacattagtggcagaaggtctttttgcttttgctaatgttctaagttacctacgt
ctgttcttcatgtacacaaccagttctattctgggaccgctccagatttcaatgggacag
atgctgcaagattttggaaaatttctgggcatgtttcttcttgtcttgttctcattcaca
attggactgacacaactttatgataaaggatttactgtaaatgaagaagaacgggactgt
gcagggattttctgtgagaaacagagcaatgacacattccattcgtttattggcacctgt
tttgctctgttctggtatatcttctcactagcacatgtagcgatctttgtcacacgcttt
agctatggtgaagaattacagtcgtttgtgggggctgttattgttggtacctacaacgtg
gtggttgtgatagtattaactaaactccttgtggcaatgcttcataaaagttttcagctg
atagcaaatcatgaagataaggaatggaaatttgctcgtgccaagctttggcttagctac
ttcgatgacaaatgtacactacctccacctttcaatgttattccatctcccaagactatc
tgttatctcttcaacagtctcagtaaatggatctgttctcacacatcaagtggcaaagtg
aaacgtcagaacagccttaaggaatggagaaatttgaagcagaagagagatgagaattat
caaaaggtgatgtgctgcttagtccaccgttacttgacatccatgagacagaagatgcaa
agtacggatcaggcaactgtggaaaacctaaatgaactgcggcaagacttatcaaaattc
cgaaatgaaatgagagacctacttggctttcgaacttctaaatatgcgatgttttatcca
agaaattaa
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